| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945166
Identifier: 119945166
GI number: 119945166
Start: 1759014
End: 1761536
Strand: Direct
Name: 119945166
Synonym: Ping_1430
Alternate gene names: NA
Gene position: 1759014-1761536 (Clockwise)
Preceding gene: 119945159
Following gene: 119945167
Centisome position: 38.58
GC content: 38.33
Gene sequence:
>2523_bases ATGGAATACAAAGCAATTGAATATAAAAAAATACTGCTTTCTTTTGTACTTTCTTTCATTTTGTTAGGTTGCGGCGGTGG AGGTGATGATGTTGTTAGTGATAATAGCGATAACCCGGCAACGATTAACGCTATTCGCTTTGCTTCCGATAGTGCAACTT TGCAGGTAGGTGAAGTATTACAAATAACCTCCACAGCCACTTATTCAGATTACAGTCAACATAGTATAACGGCTCAAGGT GATTGGATTTCATCTGATCCAAATGTTGTATCAGTTTCTCAGGGTAAATTACGCGCAATCCGCGGCGGTAATGCCATGAT TACGCAACGCTATCAAGGGCAGGAGGCGAGTTTGAATACACTCGTCACTATTGATGCCGATGTTTCTTTAACCTTGGCCA GTGGCAAGCTGACATTTCGTTGGAAGTCAGTCTTTACTGATGAATTGGGCTATCAAATCCAAAGGCAGTCTTTAACAAGA AGTGTCTCAGAATGGGAAATTATATCTGAAGTCGGCCCGATTACCGAAGGTTTTTATGGACAACAGGAGGTAGTAGATAC TACAGCAACCTATCGTATAGTGGCAGTTTTTAATCAATGGGATGAAGTCTTAAGCTCCAGTCAGGGAACAAGTTATTTTA ATTACAATCAAACAAAAGCGATGGCGATCAGTATTTTGCCACCAGTTACCCACCCTCCTTATTCAGAAACGGTGACCTTT GGTTTGTCTCAAAATGTTCTATCGTCATCATGGTTTATAGACAGTAATAATGCTTGTGGAAGTTCCGCTTGTAGCAACAA CAGTATTAATTTAAATACAAAAAGATATAGCGATGGCAATCATAGACTGGATGTGATGGCTGAAATTGAACCCGATGTAT TTGTATACCTCAATCAAACTATTGATATATATAACCCTAATCTCACTTTAACTATCAGTGTTCAGGATCAGGATTTTAAT AGCAGTGTTATTTTAGTTAAAGCGGGCAGTAAAGCTGCAGTATCAGAAGTGAATTATTACATTGATAACCACTTAGTCGC AAAGCAAACAGAGGAAATACCCATCACACTTAATCAATGTGAGAGATGGGGGTGTAATGATGTGACCTACCCTTATCATT TTGTCTGGGCAAAAGAATATGGCGAGCATCAAGTTAGAGTGACAGCTGTGGACACCGATGGTCAGTATCAGGAGCAAGTA AAAAACATTTTAATTAATTTAGCACCTATTGTTAGCTTTTCTTCACCTTTAAATAATCAGTTAATAACCGGAAATTTATT GACCGTCACAGGTGAAGTAGAGAATGAAAATCAAAATGTGACAACAACGGTTTCCTTTGGGGATATTCAGATAGGGCAAA AGCAAGCCACAGGCAGTTTCAGCTATAGTTATTCTTTAGCGGGATTACCTGAAAGTGATTATATGGTTTCCATTATTGCC ACTGATGAATTTAACGCTCGTGGTACTAATCAAGTTTCTTTTAAATATGCGCCCAGTTTAAACGCTGCAATATTAGTGAA ACACCTGCCTGTTGGCTATTCTGTAGTTGAGATTAATGATAGTCAATTGTTAGCTAAGAATACTGATTTTGAATATTTAA TAACAGATTTAGCTCTATTAAACCCGGTTGATAGAGAAGTTAAGTTTGACAAAAAACCACAAACTTATATGTATTATCCC CATGTTAATAACAAAGGTTATTTTGCTTCAGATTATGGACCAGCAGGTTCTTTAAATATGTACTTAAATAAATCAGGATC TAACCTTAATCTAACGGAATTAGTTTCTGAAGGTAGTGGTTACGGTTTTCATAGTAGTTACATGGGTAATATCTTGGTTC AATTACCTAGTAATGGAAGTGCTTTTTACTTATGGGATACAGATAATCTAACCTATGAATATCTTAAACCACCAATAGGC ACCTCACGCTGGTTAAATTGGAGGTTTACAAATAATGAGGAATGGTTATGCCAATCAGCCCCCATTGGCTTAGCTTATGA TGTTTATGCCTATCAGTTGGGAAGTGGTGGGCAACCTGTTCGCTTAACAGATAACAGCAACGATATGGGAGGTAGTTTAG GTTATGGCTCTTTCTGTGCAGGTAATGATAGCGATTATCTGGCTTACAGTACCTCAGATCAAAATGACACAACTTCTTCA TTACACTTATATGATTTATATAATCAGGAAAGTCGTTTAATTGCAGAAACAACTGTTGGTTCAGGTATTTCCAGTCGAGC TCAGTATGCTGATGGGGTGCTCGCCTGGCAGGAAAGCAATAGCGGTGCTAATAACTTAAAAATAATGTCGATGGATACGG GGGGTAGTTACTCAATTCCTAACGCGACTCTGCAAAAAGTCCGTTTTGGTAAAGTGAGCTACACCACTAGCGAGGGATTA TTTGTCTGGCTGAAAAGCAGCCAGGAAAGCCGTAAGATATGGCCATCGAGTACTACTCATTATTTAAGCCAGGGAACGAG TTATTTAGTCAGTGGCAGCTTAATTTATCAAATTGATGATTGA
Upstream 100 bases:
>100_bases TAAATTATATATAAGGTAGTGATCTTGCAGCGCTTGCTTTTAAGTTTCCTGATAAAGCACTGAATTGACATCTTGAATAT AAAATGGAGTTAATAAAACC
Downstream 100 bases:
>100_bases AGCGCATAAAGAATCGATGGGTTTTTAATTTTTAATGTTGAATTTTAAAAAAACAGTTTAGGTTCATAAGCAGGACAGGC TCTTCTGTTGCTTATACTTT
Product: Ig domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 840; Mature: 840
Protein sequence:
>840_residues MEYKAIEYKKILLSFVLSFILLGCGGGGDDVVSDNSDNPATINAIRFASDSATLQVGEVLQITSTATYSDYSQHSITAQG DWISSDPNVVSVSQGKLRAIRGGNAMITQRYQGQEASLNTLVTIDADVSLTLASGKLTFRWKSVFTDELGYQIQRQSLTR SVSEWEIISEVGPITEGFYGQQEVVDTTATYRIVAVFNQWDEVLSSSQGTSYFNYNQTKAMAISILPPVTHPPYSETVTF GLSQNVLSSSWFIDSNNACGSSACSNNSINLNTKRYSDGNHRLDVMAEIEPDVFVYLNQTIDIYNPNLTLTISVQDQDFN SSVILVKAGSKAAVSEVNYYIDNHLVAKQTEEIPITLNQCERWGCNDVTYPYHFVWAKEYGEHQVRVTAVDTDGQYQEQV KNILINLAPIVSFSSPLNNQLITGNLLTVTGEVENENQNVTTTVSFGDIQIGQKQATGSFSYSYSLAGLPESDYMVSIIA TDEFNARGTNQVSFKYAPSLNAAILVKHLPVGYSVVEINDSQLLAKNTDFEYLITDLALLNPVDREVKFDKKPQTYMYYP HVNNKGYFASDYGPAGSLNMYLNKSGSNLNLTELVSEGSGYGFHSSYMGNILVQLPSNGSAFYLWDTDNLTYEYLKPPIG TSRWLNWRFTNNEEWLCQSAPIGLAYDVYAYQLGSGGQPVRLTDNSNDMGGSLGYGSFCAGNDSDYLAYSTSDQNDTTSS LHLYDLYNQESRLIAETTVGSGISSRAQYADGVLAWQESNSGANNLKIMSMDTGGSYSIPNATLQKVRFGKVSYTTSEGL FVWLKSSQESRKIWPSSTTHYLSQGTSYLVSGSLIYQIDD
Sequences:
>Translated_840_residues MEYKAIEYKKILLSFVLSFILLGCGGGGDDVVSDNSDNPATINAIRFASDSATLQVGEVLQITSTATYSDYSQHSITAQG DWISSDPNVVSVSQGKLRAIRGGNAMITQRYQGQEASLNTLVTIDADVSLTLASGKLTFRWKSVFTDELGYQIQRQSLTR SVSEWEIISEVGPITEGFYGQQEVVDTTATYRIVAVFNQWDEVLSSSQGTSYFNYNQTKAMAISILPPVTHPPYSETVTF GLSQNVLSSSWFIDSNNACGSSACSNNSINLNTKRYSDGNHRLDVMAEIEPDVFVYLNQTIDIYNPNLTLTISVQDQDFN SSVILVKAGSKAAVSEVNYYIDNHLVAKQTEEIPITLNQCERWGCNDVTYPYHFVWAKEYGEHQVRVTAVDTDGQYQEQV KNILINLAPIVSFSSPLNNQLITGNLLTVTGEVENENQNVTTTVSFGDIQIGQKQATGSFSYSYSLAGLPESDYMVSIIA TDEFNARGTNQVSFKYAPSLNAAILVKHLPVGYSVVEINDSQLLAKNTDFEYLITDLALLNPVDREVKFDKKPQTYMYYP HVNNKGYFASDYGPAGSLNMYLNKSGSNLNLTELVSEGSGYGFHSSYMGNILVQLPSNGSAFYLWDTDNLTYEYLKPPIG TSRWLNWRFTNNEEWLCQSAPIGLAYDVYAYQLGSGGQPVRLTDNSNDMGGSLGYGSFCAGNDSDYLAYSTSDQNDTTSS LHLYDLYNQESRLIAETTVGSGISSRAQYADGVLAWQESNSGANNLKIMSMDTGGSYSIPNATLQKVRFGKVSYTTSEGL FVWLKSSQESRKIWPSSTTHYLSQGTSYLVSGSLIYQIDD >Mature_840_residues MEYKAIEYKKILLSFVLSFILLGCGGGGDDVVSDNSDNPATINAIRFASDSATLQVGEVLQITSTATYSDYSQHSITAQG DWISSDPNVVSVSQGKLRAIRGGNAMITQRYQGQEASLNTLVTIDADVSLTLASGKLTFRWKSVFTDELGYQIQRQSLTR SVSEWEIISEVGPITEGFYGQQEVVDTTATYRIVAVFNQWDEVLSSSQGTSYFNYNQTKAMAISILPPVTHPPYSETVTF GLSQNVLSSSWFIDSNNACGSSACSNNSINLNTKRYSDGNHRLDVMAEIEPDVFVYLNQTIDIYNPNLTLTISVQDQDFN SSVILVKAGSKAAVSEVNYYIDNHLVAKQTEEIPITLNQCERWGCNDVTYPYHFVWAKEYGEHQVRVTAVDTDGQYQEQV KNILINLAPIVSFSSPLNNQLITGNLLTVTGEVENENQNVTTTVSFGDIQIGQKQATGSFSYSYSLAGLPESDYMVSIIA TDEFNARGTNQVSFKYAPSLNAAILVKHLPVGYSVVEINDSQLLAKNTDFEYLITDLALLNPVDREVKFDKKPQTYMYYP HVNNKGYFASDYGPAGSLNMYLNKSGSNLNLTELVSEGSGYGFHSSYMGNILVQLPSNGSAFYLWDTDNLTYEYLKPPIG TSRWLNWRFTNNEEWLCQSAPIGLAYDVYAYQLGSGGQPVRLTDNSNDMGGSLGYGSFCAGNDSDYLAYSTSDQNDTTSS LHLYDLYNQESRLIAETTVGSGISSRAQYADGVLAWQESNSGANNLKIMSMDTGGSYSIPNATLQKVRFGKVSYTTSEGL FVWLKSSQESRKIWPSSTTHYLSQGTSYLVSGSLIYQIDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92688; Mature: 92688
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYKAIEYKKILLSFVLSFILLGCGGGGDDVVSDNSDNPATINAIRFASDSATLQVGEVL CCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCEE QITSTATYSDYSQHSITAQGDWISSDPNVVSVSQGKLRAIRGGNAMITQRYQGQEASLNT EEEECCCCCCCCCCEEEECCCEECCCCCEEEECCCCEEEEECCCEEEEEECCCCCCCCEE LVTIDADVSLTLASGKLTFRWKSVFTDELGYQIQRQSLTRSVSEWEIISEVGPITEGFYG EEEEECCEEEEEECCEEEEEEHHHHHHHHCCEEEHHHHHCCHHHHHHHHHCCCCCCCCCC QQEVVDTTATYRIVAVFNQWDEVLSSSQGTSYFNYNQTKAMAISILPPVTHPPYSETVTF CHHHCCCCCEEEEEEEEHHHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCEEEE GLSQNVLSSSWFIDSNNACGSSACSNNSINLNTKRYSDGNHRLDVMAEIEPDVFVYLNQT CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCEEEEEECE IDIYNPNLTLTISVQDQDFNSSVILVKAGSKAAVSEVNYYIDNHLVAKQTEEIPITLNQC EEEECCCEEEEEEEECCCCCCCEEEEECCCCHHHHHEEEEECCEEEECCCCCCCEEHHHH ERWGCNDVTYPYHFVWAKEYGEHQVRVTAVDTDGQYQEQVKNILINLAPIVSFSSPLNNQ CCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHEEHHHHEECCCCCCCC LITGNLLTVTGEVENENQNVTTTVSFGDIQIGQKQATGSFSYSYSLAGLPESDYMVSIIA EEECEEEEEEEEEECCCCCEEEEEEECCEEECCCCCCCCEEEEEEECCCCCCCCEEEEEE TDEFNARGTNQVSFKYAPSLNAAILVKHLPVGYSVVEINDSQLLAKNTDFEYLITDLALL ECCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEECCCHHHHHHHHHHC NPVDREVKFDKKPQTYMYYPHVNNKGYFASDYGPAGSLNMYLNKSGSNLNLTELVSEGSG CCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCEEEEEECCCCCCCHHHHHHCCCC YGFHSSYMGNILVQLPSNGSAFYLWDTDNLTYEYLKPPIGTSRWLNWRFTNNEEWLCQSA CCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCEEEECC PIGLAYDVYAYQLGSGGQPVRLTDNSNDMGGSLGYGSFCAGNDSDYLAYSTSDQNDTTSS CCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCE LHLYDLYNQESRLIAETTVGSGISSRAQYADGVLAWQESNSGANNLKIMSMDTGGSYSIP EEEEEECCCCCEEEEEEECCCCCCCHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCC NATLQKVRFGKVSYTTSEGLFVWLKSSQESRKIWPSSTTHYLSQGTSYLVSGSLIYQIDD CHHHHHEEECEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEECEEEEEECC >Mature Secondary Structure MEYKAIEYKKILLSFVLSFILLGCGGGGDDVVSDNSDNPATINAIRFASDSATLQVGEVL CCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCEE QITSTATYSDYSQHSITAQGDWISSDPNVVSVSQGKLRAIRGGNAMITQRYQGQEASLNT EEEECCCCCCCCCCEEEECCCEECCCCCEEEECCCCEEEEECCCEEEEEECCCCCCCCEE LVTIDADVSLTLASGKLTFRWKSVFTDELGYQIQRQSLTRSVSEWEIISEVGPITEGFYG EEEEECCEEEEEECCEEEEEEHHHHHHHHCCEEEHHHHHCCHHHHHHHHHCCCCCCCCCC QQEVVDTTATYRIVAVFNQWDEVLSSSQGTSYFNYNQTKAMAISILPPVTHPPYSETVTF CHHHCCCCCEEEEEEEEHHHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCEEEE GLSQNVLSSSWFIDSNNACGSSACSNNSINLNTKRYSDGNHRLDVMAEIEPDVFVYLNQT CCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCEEEEEECE IDIYNPNLTLTISVQDQDFNSSVILVKAGSKAAVSEVNYYIDNHLVAKQTEEIPITLNQC EEEECCCEEEEEEEECCCCCCCEEEEECCCCHHHHHEEEEECCEEEECCCCCCCEEHHHH ERWGCNDVTYPYHFVWAKEYGEHQVRVTAVDTDGQYQEQVKNILINLAPIVSFSSPLNNQ CCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHEEHHHHEECCCCCCCC LITGNLLTVTGEVENENQNVTTTVSFGDIQIGQKQATGSFSYSYSLAGLPESDYMVSIIA EEECEEEEEEEEEECCCCCEEEEEEECCEEECCCCCCCCEEEEEEECCCCCCCCEEEEEE TDEFNARGTNQVSFKYAPSLNAAILVKHLPVGYSVVEINDSQLLAKNTDFEYLITDLALL ECCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEEECCCHHHHHHHHHHC NPVDREVKFDKKPQTYMYYPHVNNKGYFASDYGPAGSLNMYLNKSGSNLNLTELVSEGSG CCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCEEEEEECCCCCCCHHHHHHCCCC YGFHSSYMGNILVQLPSNGSAFYLWDTDNLTYEYLKPPIGTSRWLNWRFTNNEEWLCQSA CCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCEEEECC PIGLAYDVYAYQLGSGGQPVRLTDNSNDMGGSLGYGSFCAGNDSDYLAYSTSDQNDTTSS CCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCE LHLYDLYNQESRLIAETTVGSGISSRAQYADGVLAWQESNSGANNLKIMSMDTGGSYSIP EEEEEECCCCCEEEEEEECCCCCCCHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCCCC NATLQKVRFGKVSYTTSEGLFVWLKSSQESRKIWPSSTTHYLSQGTSYLVSGSLIYQIDD CHHHHHEEECEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEEECEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA