| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119945097
Identifier: 119945097
GI number: 119945097
Start: 1672109
End: 1672609
Strand: Reverse
Name: 119945097
Synonym: Ping_1355
Alternate gene names: NA
Gene position: 1672609-1672109 (Counterclockwise)
Preceding gene: 119945098
Following gene: 119945096
Centisome position: 36.68
GC content: 42.12
Gene sequence:
>501_bases ATGGATAAAGTGCGTAAGTTTATTTGGTTCCCTACTCCTTACTACAGCATATTGCTATGGTTAGTGTGGCAAATTTTACA TGATTTTAGTCGTGGTCATATGGTGTTAGGGGCGGTGTTTGCCATTGTTATCCCTTGGATTGTCGCACCGCTCAGTGAGA AAGAACCGGTAGCAAAAAAGCCTCTTAAAGTATTGACGTATGTCTTTCGTTTACTCTTTGACATTGTGGTCTCTAATTAC GACGTAGCGAAACGCGTACTGCAAAGCAATAGTAGTTTAAAGCCGGCTTTTATTGCGGTGCCTTTAGCCATTAATGAGCC TTTACCACTCACCATCTTTACTAGCAGCGTCTCATTAACACCTGGCACAGTGAGCGTAGAATTGTCGGATAACAGGCAAT GGCTGTATGTACACGTTCTGCACCTTGAGGACGAGCAGCAGTTAATTAACCTTATCAAAGATCGTTATGAAGCACCTTTA AAGGAGATTTTCGGATGTTAA
Upstream 100 bases:
>100_bases TCGCACCGCTCAGTGAGAAAGAACCGGTAGCAAAAAAGCCTCTTAAAGTATTGACGTATGTCTTTCGTTTACTTTTTGAC ATTAATGAGGTAGCTAAATA
Downstream 100 bases:
>100_bases GTTACGCTATACTGATTTCTTGCGGCTTAATTGGTTGTGCTTTAGCCTTAAATGCTTGGCGCTTGATCATTGGCCCCACT ACCCCTGACAGAATTATCGC
Product: putative monovalent cation/H+ antiporter subunit E
Products: NA
Alternate protein names: Cation Antiporter; Na(+)/H(+) Antiporter Subunit E; PH Adaption Potassium Efflux System Protein; PH Adaption Potassium Efflux System Protein PhaE; Na+/H+ Ion Antiporter Subunit Family; Multisubunit Na+/H+ Antiporter MnhE Subunit; PhaE Protein; Multicomponent K+H+ Antiporter Subunit E; Multicomponent K+H+ Antiporter Subunit E PH Adaptation; K(+)/H(+) Antiporter Subunit E; Potassium Efflux System Protein PhaE; Sodium Hydrogen Antiporter SubunitE ShaE; Na+/H+ Ion Antiporter Subunit; PH Adaptation Potassium Efflux Protein PhaE; Monovalent Cation/Proton Antiporter Subunit E; Multisubunit Sodium/Proton Antiporter Mrpe Subunit; Na+/H+ Ion Antiporter Subunit Superfamily; Multiple Resistance And PH Regulation Related Protein MrpC
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MDKVRKFIWFPTPYYSILLWLVWQILHDFSRGHMVLGAVFAIVIPWIVAPLSEKEPVAKKPLKVLTYVFRLLFDIVVSNY DVAKRVLQSNSSLKPAFIAVPLAINEPLPLTIFTSSVSLTPGTVSVELSDNRQWLYVHVLHLEDEQQLINLIKDRYEAPL KEIFGC
Sequences:
>Translated_166_residues MDKVRKFIWFPTPYYSILLWLVWQILHDFSRGHMVLGAVFAIVIPWIVAPLSEKEPVAKKPLKVLTYVFRLLFDIVVSNY DVAKRVLQSNSSLKPAFIAVPLAINEPLPLTIFTSSVSLTPGTVSVELSDNRQWLYVHVLHLEDEQQLINLIKDRYEAPL KEIFGC >Mature_166_residues MDKVRKFIWFPTPYYSILLWLVWQILHDFSRGHMVLGAVFAIVIPWIVAPLSEKEPVAKKPLKVLTYVFRLLFDIVVSNY DVAKRVLQSNSSLKPAFIAVPLAINEPLPLTIFTSSVSLTPGTVSVELSDNRQWLYVHVLHLEDEQQLINLIKDRYEAPL KEIFGC
Specific function: Unknown
COG id: COG1863
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19078; Mature: 19078
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVRKFIWFPTPYYSILLWLVWQILHDFSRGHMVLGAVFAIVIPWIVAPLSEKEPVAKK CCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHC PLKVLTYVFRLLFDIVVSNYDVAKRVLQSNSSLKPAFIAVPLAINEPLPLTIFTSSVSLT HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECCEEEC PGTVSVELSDNRQWLYVHVLHLEDEQQLINLIKDRYEAPLKEIFGC CCEEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHCC >Mature Secondary Structure MDKVRKFIWFPTPYYSILLWLVWQILHDFSRGHMVLGAVFAIVIPWIVAPLSEKEPVAKK CCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHC PLKVLTYVFRLLFDIVVSNYDVAKRVLQSNSSLKPAFIAVPLAINEPLPLTIFTSSVSLT HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEECCEEEC PGTVSVELSDNRQWLYVHVLHLEDEQQLINLIKDRYEAPLKEIFGC CCEEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA