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The map label for this gene is yafJ [H]

Identifier: 119945080

GI number: 119945080

Start: 1655677

End: 1656444

Strand: Direct

Name: yafJ [H]

Synonym: Ping_1336

Alternate gene names: 119945080

Gene position: 1655677-1656444 (Clockwise)

Preceding gene: 119945079

Following gene: 119945081

Centisome position: 36.31

GC content: 44.92

Gene sequence:

>768_bases
ATGTGTGAATTATTAGGAATGAGCGCAAATGTGCCCACTGATATTTGTTTCAGTTTTAGCGGGTTGATAAAGCGGGGTGG
CGAAACCGGCCCGCATAAGGATGGCTGGGGAATCACTTTTTACGAAGGTAAGGGTTGCCGTAGTTTTAAAGATCCTACTC
CCAGTTGCCATTCTCCCGTCGCAAAATTGGTAAAAGAGTATCCGATCAAAAGTAAATCTGTGATCAGTCACATTCGTCAG
GCGAATAGAGGTGCTGTGAGTTTAGAAAATACCCATCCCTTTATTCGTGAATTGTGGGGGAAAAACTGGACTTATGCCCA
TAATGGTCAACTAACGGGCTCTGAAGCGCTGCCGATGGGACATGATATTCCCGTTGGACAAACCGACAGTGAGCGTGCCT
TTTGTTGGATTTTGGATCAATTACGTCAGGATTATTCAACTGAGCCTGCTGATATGCCGGCGATGTTCAAAAAAGTGGCG
GGTTATGCGGATACCCTGCGTGAAATGGGTGTTTTTAATATGCTCTTAAGTGATGGCGAATATGTGATGTGTTATTGCAC
CAATAACCTCTCCTGGATAACGCGTCGAGCACCCTTTGGCAAAGCCCGGTTGATTGATGAGGATATGGTGATCGACTTTA
ATGAAGAAACATCACCTGACGATGTGGTCACTATTATAACGACCCGTCCGTTAACTAATAATGAGCGCTGGACCAGAATG
CAGGAAGGTGAATTCTGCGTATTCTATTTTGGAGAACGTGTTCTTTGA

Upstream 100 bases:

>100_bases
AACTCAATTCCTTCGTTTTTAATGTTAAGTAAGTAAAGTTTTATGCCAAGGCCGCAATAAAAAAAAGCGGAATTGAGTTA
ACAGAGAGTAGGACTTATAA

Downstream 100 bases:

>100_bases
TGGTGAATGTTTTTTTGATGGTGAATACTGCGCGTTATTAAGCATTATTTATTATGTTGGAGAACGTGTTTTTTGATGGT
GAATACTGCGCGTTATTAAG

Product: glutamine amidotransferase, class-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MCELLGMSANVPTDICFSFSGLIKRGGETGPHKDGWGITFYEGKGCRSFKDPTPSCHSPVAKLVKEYPIKSKSVISHIRQ
ANRGAVSLENTHPFIRELWGKNWTYAHNGQLTGSEALPMGHDIPVGQTDSERAFCWILDQLRQDYSTEPADMPAMFKKVA
GYADTLREMGVFNMLLSDGEYVMCYCTNNLSWITRRAPFGKARLIDEDMVIDFNEETSPDDVVTIITTRPLTNNERWTRM
QEGEFCVFYFGERVL

Sequences:

>Translated_255_residues
MCELLGMSANVPTDICFSFSGLIKRGGETGPHKDGWGITFYEGKGCRSFKDPTPSCHSPVAKLVKEYPIKSKSVISHIRQ
ANRGAVSLENTHPFIRELWGKNWTYAHNGQLTGSEALPMGHDIPVGQTDSERAFCWILDQLRQDYSTEPADMPAMFKKVA
GYADTLREMGVFNMLLSDGEYVMCYCTNNLSWITRRAPFGKARLIDEDMVIDFNEETSPDDVVTIITTRPLTNNERWTRM
QEGEFCVFYFGERVL
>Mature_255_residues
MCELLGMSANVPTDICFSFSGLIKRGGETGPHKDGWGITFYEGKGCRSFKDPTPSCHSPVAKLVKEYPIKSKSVISHIRQ
ANRGAVSLENTHPFIRELWGKNWTYAHNGQLTGSEALPMGHDIPVGQTDSERAFCWILDQLRQDYSTEPADMPAMFKKVA
GYADTLREMGVFNMLLSDGEYVMCYCTNNLSWITRRAPFGKARLIDEDMVIDFNEETSPDDVVTIITTRPLTNNERWTRM
QEGEFCVFYFGERVL

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786417, Length=255, Percent_Identity=69.0196078431373, Blast_Score=387, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000583
- InterPro:   IPR017932 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 28860; Mature: 28860

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCELLGMSANVPTDICFSFSGLIKRGGETGPHKDGWGITFYEGKGCRSFKDPTPSCHSPV
CCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHH
AKLVKEYPIKSKSVISHIRQANRGAVSLENTHPFIRELWGKNWTYAHNGQLTGSEALPMG
HHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCEEEECCEECCCCCCCCC
HDIPVGQTDSERAFCWILDQLRQDYSTEPADMPAMFKKVAGYADTLREMGVFNMLLSDGE
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YVMCYCTNNLSWITRRAPFGKARLIDEDMVIDFNEETSPDDVVTIITTRPLTNNERWTRM
EEEEEECCCCEEEEECCCCCCCEEECCCEEEEECCCCCCCCEEEEEEECCCCCCCHHCEE
QEGEFCVFYFGERVL
CCCCEEEEECCCCCC
>Mature Secondary Structure
MCELLGMSANVPTDICFSFSGLIKRGGETGPHKDGWGITFYEGKGCRSFKDPTPSCHSPV
CCCEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHH
AKLVKEYPIKSKSVISHIRQANRGAVSLENTHPFIRELWGKNWTYAHNGQLTGSEALPMG
HHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCEEEECCEECCCCCCCCC
HDIPVGQTDSERAFCWILDQLRQDYSTEPADMPAMFKKVAGYADTLREMGVFNMLLSDGE
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YVMCYCTNNLSWITRRAPFGKARLIDEDMVIDFNEETSPDDVVTIITTRPLTNNERWTRM
EEEEEECCCCEEEEECCCCCCCEEECCCEEEEECCCCCCCCEEEEEEECCCCCCCHHCEE
QEGEFCVFYFGERVL
CCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]