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The map label for this gene is 119945054

Identifier: 119945054

GI number: 119945054

Start: 1626485

End: 1627525

Strand: Reverse

Name: 119945054

Synonym: Ping_1309

Alternate gene names: NA

Gene position: 1627525-1626485 (Counterclockwise)

Preceding gene: 119945055

Following gene: 119945053

Centisome position: 35.69

GC content: 44.28

Gene sequence:

>1041_bases
ATGAATAAATACCTAATCGCGCTGGCAACTGCCACCTTATTTTCACAAAGCGTTATGGCAACGACGGAGATGGAACTGCC
GGATAGGCAAGCTGAGCTGCCGGCACACCCAAAAACAAAAAAAGTGGATCAATTAGTACCACGGGACTTAAGCACTATTC
CCAATACGCCTTTTGGTGCAAAAGTAAAACAGGGCTACTCCCTGTTTGTTAATTCACAAACCCTACGAGACAAGTACGTC
GGTAACGAACAAAACTGTGTCAATTGCCATATGCAGGCAGGCATGAAAGCCAATTCAGCCCCACTTTGGGGAGCGTTTAT
GGCCTACCCTGCTTATCGTTCTAAAAACGACAAAGTAAATACCTATGGGGAACGTATTCAAGGTTGTTTTACTTACTCAA
TGGACGGTACTCCACCAGCAAAAGACTCTCCAGAGTTAGTCGCACTGAGTGCCTACTCTTATTGGCTGGCAATGGGCGGA
TTATTCGATCAATACGACATGCAGGATAGACCTATTTCGGAATTATCTGATGCAGCCCTGCAATTAGGTGGTAATGATCC
ATCATTTATTTTACCTGTTGAAATGAAAGAAGATTTACCCGCAGGAAAACGGGGAACCTTAGCAGGTCGTAGCTACCCTA
AACTTGACAAACCTGAGCAAGGCCCTTCAATTGAACGTGGGGAGATTGTTTATAATACAACCTGTGCAAGTTGTCATGGT
GCAAATGGCGAAGGCATTAAAGCCAACGGTGTACAATCTTTCCCACCATTATGGGGCAAAGATTCGTTCAACTGGGGCGC
AGGAATGCATCGTGTTAATACAGCGGCATTCTTTATCTATGAAAATATGCCACTGGGTAAAAGCATTCAAATAGCCAAAC
AACAAGCATGGGATGTAGCCGCCTTTATGAACAGTCATGAACGCCCTCAAGATCCTCGTTTTAACGGCGATTTAAAGGCA
ACTCAGGAGAAATATCATAATCACCAGGGCTACTACGGAAAAACCGTTAATGGTAAAGTGATCGGCTCCAACGCATTTTA
A

Upstream 100 bases:

>100_bases
GATCTCAACGATGTAATGGGCAGTATTGCAAGACAACTCACCAATACTGAAATATCTCAATTAGCACTCTATTTTGCTAA
TGTGAAATAAGGAAAATACG

Downstream 100 bases:

>100_bases
TAAAAAATACTGATAAAATAGCCTCTCTATTGGCTAAAAAAAGCCCTTATTTATTTCTGCCAAGAATTGAATAAGGTTTT
TTTATTATAATATTCCTGAT

Product: diheme-containing SoxA-like protein

Products: NA

Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Gluconate 2-Dehydrogenase; Cytochrome; C-Type Cytochrome; Cytochrome C Family Protein Degenerate; Quinol-Cytochrome C Reductase Cytochrome C Subunit; CYTA Protein; Di-Heme Cytochrome C; Class I Cytochrome C; Diheme-Containing SoxA-Like Protein; Thiosulfate Dehydrogenase; OmpA/MotB; Cytochrome C Family

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNKYLIALATATLFSQSVMATTEMELPDRQAELPAHPKTKKVDQLVPRDLSTIPNTPFGAKVKQGYSLFVNSQTLRDKYV
GNEQNCVNCHMQAGMKANSAPLWGAFMAYPAYRSKNDKVNTYGERIQGCFTYSMDGTPPAKDSPELVALSAYSYWLAMGG
LFDQYDMQDRPISELSDAALQLGGNDPSFILPVEMKEDLPAGKRGTLAGRSYPKLDKPEQGPSIERGEIVYNTTCASCHG
ANGEGIKANGVQSFPPLWGKDSFNWGAGMHRVNTAAFFIYENMPLGKSIQIAKQQAWDVAAFMNSHERPQDPRFNGDLKA
TQEKYHNHQGYYGKTVNGKVIGSNAF

Sequences:

>Translated_346_residues
MNKYLIALATATLFSQSVMATTEMELPDRQAELPAHPKTKKVDQLVPRDLSTIPNTPFGAKVKQGYSLFVNSQTLRDKYV
GNEQNCVNCHMQAGMKANSAPLWGAFMAYPAYRSKNDKVNTYGERIQGCFTYSMDGTPPAKDSPELVALSAYSYWLAMGG
LFDQYDMQDRPISELSDAALQLGGNDPSFILPVEMKEDLPAGKRGTLAGRSYPKLDKPEQGPSIERGEIVYNTTCASCHG
ANGEGIKANGVQSFPPLWGKDSFNWGAGMHRVNTAAFFIYENMPLGKSIQIAKQQAWDVAAFMNSHERPQDPRFNGDLKA
TQEKYHNHQGYYGKTVNGKVIGSNAF
>Mature_346_residues
MNKYLIALATATLFSQSVMATTEMELPDRQAELPAHPKTKKVDQLVPRDLSTIPNTPFGAKVKQGYSLFVNSQTLRDKYV
GNEQNCVNCHMQAGMKANSAPLWGAFMAYPAYRSKNDKVNTYGERIQGCFTYSMDGTPPAKDSPELVALSAYSYWLAMGG
LFDQYDMQDRPISELSDAALQLGGNDPSFILPVEMKEDLPAGKRGTLAGRSYPKLDKPEQGPSIERGEIVYNTTCASCHG
ANGEGIKANGVQSFPPLWGKDSFNWGAGMHRVNTAAFFIYENMPLGKSIQIAKQQAWDVAAFMNSHERPQDPRFNGDLKA
TQEKYHNHQGYYGKTVNGKVIGSNAF

Specific function: Unknown

COG id: COG3258

COG function: function code C; Cytochrome c

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38177; Mature: 38177

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKYLIALATATLFSQSVMATTEMELPDRQAELPAHPKTKKVDQLVPRDLSTIPNTPFGA
CCCEEEEEHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCC
KVKQGYSLFVNSQTLRDKYVGNEQNCVNCHMQAGMKANSAPLWGAFMAYPAYRSKNDKVN
CCCCCEEEEEECHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCH
TYGERIQGCFTYSMDGTPPAKDSPELVALSAYSYWLAMGGLFDQYDMQDRPISELSDAAL
HHHHHCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
QLGGNDPSFILPVEMKEDLPAGKRGTLAGRSYPKLDKPEQGPSIERGEIVYNTTCASCHG
EECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
ANGEGIKANGVQSFPPLWGKDSFNWGAGMHRVNTAAFFIYENMPLGKSIQIAKQQAWDVA
CCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECEEEEEEEECCCCCCCHHHHHHHHHHHH
AFMNSHERPQDPRFNGDLKATQEKYHNHQGYYGKTVNGKVIGSNAF
HHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MNKYLIALATATLFSQSVMATTEMELPDRQAELPAHPKTKKVDQLVPRDLSTIPNTPFGA
CCCEEEEEHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCC
KVKQGYSLFVNSQTLRDKYVGNEQNCVNCHMQAGMKANSAPLWGAFMAYPAYRSKNDKVN
CCCCCEEEEEECHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCH
TYGERIQGCFTYSMDGTPPAKDSPELVALSAYSYWLAMGGLFDQYDMQDRPISELSDAAL
HHHHHCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
QLGGNDPSFILPVEMKEDLPAGKRGTLAGRSYPKLDKPEQGPSIERGEIVYNTTCASCHG
EECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
ANGEGIKANGVQSFPPLWGKDSFNWGAGMHRVNTAAFFIYENMPLGKSIQIAKQQAWDVA
CCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECEEEEEEEECCCCCCCHHHHHHHHHHHH
AFMNSHERPQDPRFNGDLKATQEKYHNHQGYYGKTVNGKVIGSNAF
HHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA