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The map label for this gene is yufP [H]

Identifier: 119945045

GI number: 119945045

Start: 1606441

End: 1607574

Strand: Direct

Name: yufP [H]

Synonym: Ping_1299

Alternate gene names: 119945045

Gene position: 1606441-1607574 (Clockwise)

Preceding gene: 119945044

Following gene: 119945046

Centisome position: 35.23

GC content: 44.36

Gene sequence:

>1134_bases
ATGAATGACTCAAAAATACCGGTATGGGTCAATGTGTTTGTCCTGCCTATGGTTAATATTCTATTAGCCTTTGCATTTTC
TGCCATTATTTTTATTGCCGTTGACGTTGATCCTATTGAAGCTGCTCAGGTGATGATCCGCGGAGCTTTCGGGTATCAGG
AAGGTATTGGTTATACCTTGTATTATGCAACTAACTTTATGTTTACTGGGCTTGCCGTGGCAGTGGCTTTCTCTGCTGGC
CTGTTTAATATTGGGGGCGAAGGTCAGGCATATATGGGGGGGCTGGGTGTCGGTATCGCCTGTCTGGCGCTCGACAGCAG
TTTACCTTTTTGGGCTATTTTACCTATTACCATGTTTGCCAGTATGGCTTTTGGCGCATTATGGGCATTGATACCCGCCT
ATTTACAGGCCTATCGCGGTAGTCATATTGTTATTACGACTATTATGTTTAACTTTATTGCTGCCTCATTGATGGTTTAT
TTGATGGTCAATGTGTTTAAGCTTGACGGGCAAATGGCGCCTGTCTCCCGTATTATTGAAGACAGTGCCAAGCTGCCTAT
GTTTCATGAGATGGCGGCCTGGATCGATTGGTCATTTGAATCTTCACCGCTCAATCTGAGCTTCTTTATTGCTTTGGTCT
GTTGCCTGTTAGTGTGGATCTTATTATGGCGCACCCGGTGGGGCTACGCGATTCGCGCCATGGGATCCAGTCCAACGGCT
GCTGAGTATGGCGGTATAAATTATAAAAAACTGACGATAATAGTGATGCTTATTTCCGGTGCGCTATCGGGTTTGTTAGG
TATTAATGAGGTGCAAGGTTATAGCCATCAGTTGAAACTGGATTTTGTGGCAGGTTATGGTTTTACCGGTATTGCGGTTT
GCCTGATTGGCCGTAACCATCCCGTTGGTATTATTCTGGCCAGCTTATTATTTGGTGTTCTTTATCAGGGGGGGGCTGAA
CTGTCCTTTGATTTCCCGAATATCGATAGAGAGATGATTCAGGTCATACAGGCCTTAGTTGTTTTATTTAGTGGTGCACT
CGCCTTTATGCTGGTAAAACCCACGGAGCATTTTTTTGTCTTTCTGGATAAACGTAAAACATTATCCCTTAAGCAGACAA
ATCCGGAGACTTAA

Upstream 100 bases:

>100_bases
TTGGTGAAGTGAGTGCTGCGCAAGCCAACGAGAAAATTCTTGGCATGATGATGGCCAATATTATGCCTGATGAATTACAG
GCAACAACAGGAGGCAAGCA

Downstream 100 bases:

>100_bases
ATTATGTATGAAAATCTGATTTTAATCTTAGATGCCACCTTAAGAGTCTCTACTCCTCTGATATTAGCGGCACTGGCAGG
GCTTTTTTCTGAACGCTCCG

Product: ABC transporter inner-membrane translocator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNDSKIPVWVNVFVLPMVNILLAFAFSAIIFIAVDVDPIEAAQVMIRGAFGYQEGIGYTLYYATNFMFTGLAVAVAFSAG
LFNIGGEGQAYMGGLGVGIACLALDSSLPFWAILPITMFASMAFGALWALIPAYLQAYRGSHIVITTIMFNFIAASLMVY
LMVNVFKLDGQMAPVSRIIEDSAKLPMFHEMAAWIDWSFESSPLNLSFFIALVCCLLVWILLWRTRWGYAIRAMGSSPTA
AEYGGINYKKLTIIVMLISGALSGLLGINEVQGYSHQLKLDFVAGYGFTGIAVCLIGRNHPVGIILASLLFGVLYQGGAE
LSFDFPNIDREMIQVIQALVVLFSGALAFMLVKPTEHFFVFLDKRKTLSLKQTNPET

Sequences:

>Translated_377_residues
MNDSKIPVWVNVFVLPMVNILLAFAFSAIIFIAVDVDPIEAAQVMIRGAFGYQEGIGYTLYYATNFMFTGLAVAVAFSAG
LFNIGGEGQAYMGGLGVGIACLALDSSLPFWAILPITMFASMAFGALWALIPAYLQAYRGSHIVITTIMFNFIAASLMVY
LMVNVFKLDGQMAPVSRIIEDSAKLPMFHEMAAWIDWSFESSPLNLSFFIALVCCLLVWILLWRTRWGYAIRAMGSSPTA
AEYGGINYKKLTIIVMLISGALSGLLGINEVQGYSHQLKLDFVAGYGFTGIAVCLIGRNHPVGIILASLLFGVLYQGGAE
LSFDFPNIDREMIQVIQALVVLFSGALAFMLVKPTEHFFVFLDKRKTLSLKQTNPET
>Mature_377_residues
MNDSKIPVWVNVFVLPMVNILLAFAFSAIIFIAVDVDPIEAAQVMIRGAFGYQEGIGYTLYYATNFMFTGLAVAVAFSAG
LFNIGGEGQAYMGGLGVGIACLALDSSLPFWAILPITMFASMAFGALWALIPAYLQAYRGSHIVITTIMFNFIAASLMVY
LMVNVFKLDGQMAPVSRIIEDSAKLPMFHEMAAWIDWSFESSPLNLSFFIALVCCLLVWILLWRTRWGYAIRAMGSSPTA
AEYGGINYKKLTIIVMLISGALSGLLGINEVQGYSHQLKLDFVAGYGFTGIAVCLIGRNHPVGIILASLLFGVLYQGGAE
LSFDFPNIDREMIQVIQALVVLFSGALAFMLVKPTEHFFVFLDKRKTLSLKQTNPET

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 41287; Mature: 41287

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSKIPVWVNVFVLPMVNILLAFAFSAIIFIAVDVDPIEAAQVMIRGAFGYQEGIGYTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCHHCCCCEEE
YYATNFMFTGLAVAVAFSAGLFNIGGEGQAYMGGLGVGIACLALDSSLPFWAILPITMFA
EEHHHHHHHHHHHHHHHHCCCEECCCCCCEEECHHHHHHEEEEECCCCCHHHHHHHHHHH
SMAFGALWALIPAYLQAYRGSHIVITTIMFNFIAASLMVYLMVNVFKLDGQMAPVSRIIE
HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
DSAKLPMFHEMAAWIDWSFESSPLNLSFFIALVCCLLVWILLWRTRWGYAIRAMGSSPTA
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
AEYGGINYKKLTIIVMLISGALSGLLGINEVQGYSHQLKLDFVAGYGFTGIAVCLIGRNH
HHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEEEECCCHHHEEEEEECCCC
PVGIILASLLFGVLYQGGAELSFDFPNIDREMIQVIQALVVLFSGALAFMLVKPTEHFFV
CHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEE
FLDKRKTLSLKQTNPET
EEECCCEEEECCCCCCC
>Mature Secondary Structure
MNDSKIPVWVNVFVLPMVNILLAFAFSAIIFIAVDVDPIEAAQVMIRGAFGYQEGIGYTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCHHCCCCEEE
YYATNFMFTGLAVAVAFSAGLFNIGGEGQAYMGGLGVGIACLALDSSLPFWAILPITMFA
EEHHHHHHHHHHHHHHHHCCCEECCCCCCEEECHHHHHHEEEEECCCCCHHHHHHHHHHH
SMAFGALWALIPAYLQAYRGSHIVITTIMFNFIAASLMVYLMVNVFKLDGQMAPVSRIIE
HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
DSAKLPMFHEMAAWIDWSFESSPLNLSFFIALVCCLLVWILLWRTRWGYAIRAMGSSPTA
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
AEYGGINYKKLTIIVMLISGALSGLLGINEVQGYSHQLKLDFVAGYGFTGIAVCLIGRNH
HHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEEEECCCHHHEEEEEECCCC
PVGIILASLLFGVLYQGGAELSFDFPNIDREMIQVIQALVVLFSGALAFMLVKPTEHFFV
CHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEE
FLDKRKTLSLKQTNPET
EEECCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]