| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is terD [H]
Identifier: 119945014
GI number: 119945014
Start: 1573363
End: 1573941
Strand: Direct
Name: terD [H]
Synonym: Ping_1266
Alternate gene names: 119945014
Gene position: 1573363-1573941 (Clockwise)
Preceding gene: 119945013
Following gene: 119945015
Centisome position: 34.51
GC content: 38.86
Gene sequence:
>579_bases ATGGCAGTTTCTTTGCAAAAAGGCGGTAACGTCTCTTTAGAAAAAATAGCGCCCTCCATGCAGAATTGCTTGCTTGGTTT GGGATGGGATGCAAATTCAATGAATGGTCATGATTTTGATCTAGACGCATCTGCATTTATGCTTAATTCAGAAAATAAAA TTCTTTCTGATTCTCATTTTATTTTCTATGGTCAATTGTTATCTCCATGCCAATCTATTGAACACACGGGTGATAATTTA ACCGGTGAGGGTGACGGAGATGATGAATCCATTAAAGTGGACTTAGGCGCAGTGCCTGCCGAGGTTGCTAAAATTGTTGT CGGTGTCACTATTCATGAAGCAGAGAAACGCCATCAAAATTTCGGGCAGGTTTCAAATGCATTTATGCGTTTAATAGATG AAAGCAATCATCAAGAAGTGGTGCGTTATGATTTATCTGAGGATTATTCCACAGAAACTGCATTAATTTTTGGTGAATTA TACCGCCATAAAGGAGAGTGGAAATTTAAAGCAATTGGTCAAGGTTACTCAGGTGGACTGCATGCGATGGCAGTCAACTA TGGGATTAATATTACCTAA
Upstream 100 bases:
>100_bases ACTCTTTGTTGTGATCAGTTAGCTATCCACTTTTATCTTTATATTAAATGACATTAAATATCTTTACATTAAATGACACT AAACTATTATAGGACATAAA
Downstream 100 bases:
>100_bases CATTTTTTGATGTTAGGTAAAACGTACTGAATATAATTAGAGATATTAAATGAACACAATAGAAAACGTATGGCCCTTTT TATTAATTATTTTTTCATGT
Product: stress protein, tellurium resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAVSLQKGGNVSLEKIAPSMQNCLLGLGWDANSMNGHDFDLDASAFMLNSENKILSDSHFIFYGQLLSPCQSIEHTGDNL TGEGDGDDESIKVDLGAVPAEVAKIVVGVTIHEAEKRHQNFGQVSNAFMRLIDESNHQEVVRYDLSEDYSTETALIFGEL YRHKGEWKFKAIGQGYSGGLHAMAVNYGINIT
Sequences:
>Translated_192_residues MAVSLQKGGNVSLEKIAPSMQNCLLGLGWDANSMNGHDFDLDASAFMLNSENKILSDSHFIFYGQLLSPCQSIEHTGDNL TGEGDGDDESIKVDLGAVPAEVAKIVVGVTIHEAEKRHQNFGQVSNAFMRLIDESNHQEVVRYDLSEDYSTETALIFGEL YRHKGEWKFKAIGQGYSGGLHAMAVNYGINIT >Mature_191_residues AVSLQKGGNVSLEKIAPSMQNCLLGLGWDANSMNGHDFDLDASAFMLNSENKILSDSHFIFYGQLLSPCQSIEHTGDNLT GEGDGDDESIKVDLGAVPAEVAKIVVGVTIHEAEKRHQNFGQVSNAFMRLIDESNHQEVVRYDLSEDYSTETALIFGELY RHKGEWKFKAIGQGYSGGLHAMAVNYGINIT
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 21013; Mature: 20881
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSLQKGGNVSLEKIAPSMQNCLLGLGWDANSMNGHDFDLDASAFMLNSENKILSDSHF CEEECCCCCCEEHHHHCCHHHHCEEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCE IFYGQLLSPCQSIEHTGDNLTGEGDGDDESIKVDLGAVPAEVAKIVVGVTIHEAEKRHQN EEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHEEEEHHHHHHHHH FGQVSNAFMRLIDESNHQEVVRYDLSEDYSTETALIFGELYRHKGEWKFKAIGQGYSGGL HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCE HAMAVNYGINIT EEEEEECCCEEC >Mature Secondary Structure AVSLQKGGNVSLEKIAPSMQNCLLGLGWDANSMNGHDFDLDASAFMLNSENKILSDSHF EEECCCCCCEEHHHHCCHHHHCEEECCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCE IFYGQLLSPCQSIEHTGDNLTGEGDGDDESIKVDLGAVPAEVAKIVVGVTIHEAEKRHQN EEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHEEEEHHHHHHHHH FGQVSNAFMRLIDESNHQEVVRYDLSEDYSTETALIFGELYRHKGEWKFKAIGQGYSGGL HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCE HAMAVNYGINIT EEEEEECCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3049247 [H]