| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944992
Identifier: 119944992
GI number: 119944992
Start: 1551925
End: 1552404
Strand: Reverse
Name: 119944992
Synonym: Ping_1243
Alternate gene names: NA
Gene position: 1552404-1551925 (Counterclockwise)
Preceding gene: 119944993
Following gene: 119944990
Centisome position: 34.05
GC content: 39.58
Gene sequence:
>480_bases ATGAATGAGGAGTATTCACTGCAGGATTTATTAGGTCAGGAAAGCGAACTGCAATTTGCATTCTTTAATAATCAGACCGC CTGGAAATTAGGCTGTCAATTAAAAAAAATAGCCGAGGATAACAGTACTCTGGTAGCCATTGAAGTGTATGCCTTTAGCC AAACTTTATTTAGTTATGCTATGTCTGGCACACAACTTGATAATCAAATCTGGATAAAACGAAAACGGCAGACTGTATTA CGTTTTGGTCACAGCTCTTATTATATTGGTCAATACAATAAAGCTAAAAACAGAGAATTTGAACAGCAGGTGCATATTAA TGCTGATGATTATTGCGCCCATGGAGGGGCATTCCCGATTAGGATAAAAAAATGTGGTTTGGTGGGGGTGGTGACAGTCT CTGGCCTTCCGCAACGGGAAGATCATCAGATGGTCATTGACGCCCTCACTGATTTAATTAAATCAGTGCAAAAGAGCTAA
Upstream 100 bases:
>100_bases CTAAACCTCCCGTATTGGCAGAAGATGCATTGTGGAATATTAAACTGATTAAATTAGCGATGGAAAGCAGCCGCTTAGGA AAAACAATGAAGGTTGAATT
Downstream 100 bases:
>100_bases AAACCTTAACTACCCTGCTTGTTAATTCCCCGATGGCAGCTGCTTAAATGGATACGCGTTAGAGCAGCTAAGCGGACGGT TTATCAATATTAATTAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYAMSGTQLDNQIWIKRKRQTVL RFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPIRIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS
Sequences:
>Translated_159_residues MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYAMSGTQLDNQIWIKRKRQTVL RFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPIRIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS >Mature_159_residues MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYAMSGTQLDNQIWIKRKRQTVL RFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPIRIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS
Specific function: Unknown
COG id: COG4702
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0303 family
Homologues:
Organism=Saccharomyces cerevisiae, GI6319613, Length=149, Percent_Identity=33.5570469798658, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1243_PSYIN (A1SUA8)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942672.1 - ProteinModelPortal: A1SUA8 - STRING: A1SUA8 - GeneID: 4625000 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_1243 - eggNOG: COG4702 - HOGENOM: HBG367719 - OMA: TNEDALQ - PhylomeDB: A1SUA8 - ProtClustDB: CLSK2487533 - BioCyc: PING357804:PING_1243-MONOMER - HAMAP: MF_00761 - InterPro: IPR005624 - InterPro: IPR010371 - PIRSF: PIRSF008757
Pfam domain/function: PF03928 DUF336
EC number: NA
Molecular weight: Translated: 18146; Mature: 18146
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYA CCCCCCHHHHCCCCCCEEEEEECCCEEEECCCHHHHHCCCCCEEEEEEEHHHHHHHHHHH MSGTQLDNQIWIKRKRQTVLRFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPI HCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEEECCCCCCCCCCCCCEE RIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS EEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNEEYSLQDLLGQESELQFAFFNNQTAWKLGCQLKKIAEDNSTLVAIEVYAFSQTLFSYA CCCCCCHHHHCCCCCCEEEEEECCCEEEECCCHHHHHCCCCCEEEEEEEHHHHHHHHHHH MSGTQLDNQIWIKRKRQTVLRFGHSSYYIGQYNKAKNREFEQQVHINADDYCAHGGAFPI HCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHEEECCCCCCCCCCCCCEE RIKKCGLVGVVTVSGLPQREDHQMVIDALTDLIKSVQKS EEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA