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The map label for this gene is yfbS [C]

Identifier: 119944989

GI number: 119944989

Start: 1548392

End: 1550224

Strand: Direct

Name: yfbS [C]

Synonym: Ping_1240

Alternate gene names: 119944989

Gene position: 1548392-1550224 (Clockwise)

Preceding gene: 119944988

Following gene: 119944991

Centisome position: 33.96

GC content: 39.12

Gene sequence:

>1833_bases
ATGCCGTTAGTCACGTCTGTCAATAGCCATTCGATTGCAGTGATGCTTTTAACTCTTTTAGCACTCTTTCTTTTTAGCAG
AGAAAAAATTCCTTTAGAAACGTCCAGTCTTTTTATTATTGTGGCTTTGACAGTTGGTTTTACCATTTTCCCCTATCAAT
ATCAAAACACCGCCATCCATGCGATCGACTTTTTTTCTGGATTTGGGCACGAGGCTTTAATCGCTGTTTGTGCGCTGATG
GTTGCCGGGCAAGGATTAGTTAGAACCGGGGCTTTAGAGCCTGTTGGCAGATTATTGTCGAGGTTATGGAGTGTCTATCC
AAAATTATCCCTTCTTCTTACTCTGATCCTAGGAGCAACGTTAAGCGCCTTTGTTAATAATGTACCCATTGTTATTTTAC
TTTTACCTATTTTGACAACGGTATCAATACGGACAAATACTTCAGCTTCAAAGGTATTGATGCCGATGGGATTTGCCACC
CTAATAGGGGGAATGAGTACAACAATTGGCACATCGACCAATCTATTGGTTGTTTCAGTTGCTGTTGATATGGGATTAAA
AAGTTTTGCTATGTTTGATTTTTTCTTACCGGTCGCTGTTGCCGGGGCTTTTGCTATCGCCTATTTATGGTTAGTGGTTC
CCTATTTTATTAAAGAGCGGAAACCGCCTTTTTCTGATACTTCACCGAGAATATTTACGGCAAAACTCATGATTCCTGCC
GATTCAGTTTCTGAAAATCAAGCGCTGGAGCAGCTGGTAGCTAAAACAGATGGCATGATGAGGGTGTTAAGAATTCACCG
AAATAGCAGCGATATCTATTTATTACCAAATTCAAAAACAATTATAAAAGCCGATGATATGTTAGTGGTAGAGGATACGC
CTGAAAATTTAAAGAGTTTTGAAACAATATTGGGCGCTGTTTTATATACCAGTTTAGGGGCAGTGGATGAAGCTCATCCC
TTGATGGAAAAAGAGCAACAAATCGCCGAGGTTATTATTTCTCAGGGATCACGATTAAACAATACAATGCTTTCTCAAAC
ACGATTTTTAGAAAGACATAACCTGGTTGCCCTAGCACTGCATCGTCCCGGGAAAAAAACAGAAACCCTTTTTAAGGGAA
TGGCTGATATTTATTTAAAAGTGGGTGATGTTTTACTGATTCAAGGGAAAAGTGAGCATATCGTTGAATTGAAAAAAAAC
AGAGAATTATTGGTGTTAGATGCAACGTCTGATTTAACACACTCAAAACAGGCCCCTTGGGCATTTTTTATTATGTTTAC
TATTATTGCCATTTCGGCATTGGGTATTTTACCGATAGCAATCAGTGCCACATTAGGCGTGTTTTTGATGTTTGTTACCA
GCTGTATTAATTGGAAAGATGCTTCAAATGCGCTCAACACTCAAGTTATTTTAATCGTGGTTGCTTCTTTGGCCTTAGGC
CAGGCTTTACTGAAAACGGGAGCAGCTTCTTATTTAGCACATCTGTTTATATTAGCAACAGAGGGTAGCTCTACGACTTT
TATGTTAAGTGGTTTAATGTTGCTGATGGCAATTATGACCAATATAGTTTCAAATAATGCCGCAGCGGTGATCGGAACAC
CGATTGCGATAGGCATTGCACAACAGCTAAATTTACCTGCAGAACCTTTTGTTTTAGCCGTTCTTTTTGGTGCAAACATG
AGTTACGCCACACCCATGGCTTATAAAACAAATCTTTTAGTCATGACCGCGGGTGGATATACCTTTAATGATTTCTTAAA
AATAGGGATACCATTAATCATTATCATGTGGGTGGTGCTCAGTTGGACATTAACCATACTATATGACTTATAA

Upstream 100 bases:

>100_bases
ATACAGCAAAAAGAAGGGAAGAAATACAGCTTAAAGCTACACTATAAAAATGAATCAGAATTTCAGATACAAATAGCCTA
ATAAAGTCAAAAGGGTTTCT

Downstream 100 bases:

>100_bases
GTGGGCATATTGCTAAGCGAAATAGTTAACAGCAAGCAACCTCTTTGATCTATAGTAGTCTCGGCGAGTGACTCGCTTTA
CCAGCATGATTTTTTTCATT

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MPLVTSVNSHSIAVMLLTLLALFLFSREKIPLETSSLFIIVALTVGFTIFPYQYQNTAIHAIDFFSGFGHEALIAVCALM
VAGQGLVRTGALEPVGRLLSRLWSVYPKLSLLLTLILGATLSAFVNNVPIVILLLPILTTVSIRTNTSASKVLMPMGFAT
LIGGMSTTIGTSTNLLVVSVAVDMGLKSFAMFDFFLPVAVAGAFAIAYLWLVVPYFIKERKPPFSDTSPRIFTAKLMIPA
DSVSENQALEQLVAKTDGMMRVLRIHRNSSDIYLLPNSKTIIKADDMLVVEDTPENLKSFETILGAVLYTSLGAVDEAHP
LMEKEQQIAEVIISQGSRLNNTMLSQTRFLERHNLVALALHRPGKKTETLFKGMADIYLKVGDVLLIQGKSEHIVELKKN
RELLVLDATSDLTHSKQAPWAFFIMFTIIAISALGILPIAISATLGVFLMFVTSCINWKDASNALNTQVILIVVASLALG
QALLKTGAASYLAHLFILATEGSSTTFMLSGLMLLMAIMTNIVSNNAAAVIGTPIAIGIAQQLNLPAEPFVLAVLFGANM
SYATPMAYKTNLLVMTAGGYTFNDFLKIGIPLIIIMWVVLSWTLTILYDL

Sequences:

>Translated_610_residues
MPLVTSVNSHSIAVMLLTLLALFLFSREKIPLETSSLFIIVALTVGFTIFPYQYQNTAIHAIDFFSGFGHEALIAVCALM
VAGQGLVRTGALEPVGRLLSRLWSVYPKLSLLLTLILGATLSAFVNNVPIVILLLPILTTVSIRTNTSASKVLMPMGFAT
LIGGMSTTIGTSTNLLVVSVAVDMGLKSFAMFDFFLPVAVAGAFAIAYLWLVVPYFIKERKPPFSDTSPRIFTAKLMIPA
DSVSENQALEQLVAKTDGMMRVLRIHRNSSDIYLLPNSKTIIKADDMLVVEDTPENLKSFETILGAVLYTSLGAVDEAHP
LMEKEQQIAEVIISQGSRLNNTMLSQTRFLERHNLVALALHRPGKKTETLFKGMADIYLKVGDVLLIQGKSEHIVELKKN
RELLVLDATSDLTHSKQAPWAFFIMFTIIAISALGILPIAISATLGVFLMFVTSCINWKDASNALNTQVILIVVASLALG
QALLKTGAASYLAHLFILATEGSSTTFMLSGLMLLMAIMTNIVSNNAAAVIGTPIAIGIAQQLNLPAEPFVLAVLFGANM
SYATPMAYKTNLLVMTAGGYTFNDFLKIGIPLIIIMWVVLSWTLTILYDL
>Mature_609_residues
PLVTSVNSHSIAVMLLTLLALFLFSREKIPLETSSLFIIVALTVGFTIFPYQYQNTAIHAIDFFSGFGHEALIAVCALMV
AGQGLVRTGALEPVGRLLSRLWSVYPKLSLLLTLILGATLSAFVNNVPIVILLLPILTTVSIRTNTSASKVLMPMGFATL
IGGMSTTIGTSTNLLVVSVAVDMGLKSFAMFDFFLPVAVAGAFAIAYLWLVVPYFIKERKPPFSDTSPRIFTAKLMIPAD
SVSENQALEQLVAKTDGMMRVLRIHRNSSDIYLLPNSKTIIKADDMLVVEDTPENLKSFETILGAVLYTSLGAVDEAHPL
MEKEQQIAEVIISQGSRLNNTMLSQTRFLERHNLVALALHRPGKKTETLFKGMADIYLKVGDVLLIQGKSEHIVELKKNR
ELLVLDATSDLTHSKQAPWAFFIMFTIIAISALGILPIAISATLGVFLMFVTSCINWKDASNALNTQVILIVVASLALGQ
ALLKTGAASYLAHLFILATEGSSTTFMLSGLMLLMAIMTNIVSNNAAAVIGTPIAIGIAQQLNLPAEPFVLAVLFGANMS
YATPMAYKTNLLVMTAGGYTFNDFLKIGIPLIIIMWVVLSWTLTILYDL

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=631, Percent_Identity=26.6244057052298, Blast_Score=175, Evalue=8e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 66228; Mature: 66096

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLVTSVNSHSIAVMLLTLLALFLFSREKIPLETSSLFIIVALTVGFTIFPYQYQNTAIH
CCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEHHCCEEEEEEECCCEEE
AIDFFSGFGHEALIAVCALMVAGQGLVRTGALEPVGRLLSRLWSVYPKLSLLLTLILGAT
EEHHHHCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAFVNNVPIVILLLPILTTVSIRTNTSASKVLMPMGFATLIGGMSTTIGTSTNLLVVSV
HHHHHCCCCHHHHHHHHHHEEEEECCCCHHHHHHHCCHHHHHCCCHHCCCCCCCEEEEEE
AVDMGLKSFAMFDFFLPVAVAGAFAIAYLWLVVPYFIKERKPPFSDTSPRIFTAKLMIPA
EHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC
DSVSENQALEQLVAKTDGMMRVLRIHRNSSDIYLLPNSKTIIKADDMLVVEDTPENLKSF
CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCEEEEECCEEEEECCCHHHHHH
ETILGAVLYTSLGAVDEAHPLMEKEQQIAEVIISQGSRLNNTMLSQTRFLERHNLVALAL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEE
HRPGKKTETLFKGMADIYLKVGDVLLIQGKSEHIVELKKNRELLVLDATSDLTHSKQAPW
ECCCCHHHHHHHHHHHHHHEECCEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCCCCH
AFFIMFTIIAISALGILPIAISATLGVFLMFVTSCINWKDASNALNTQVILIVVASLALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
QALLKTGAASYLAHLFILATEGSSTTFMLSGLMLLMAIMTNIVSNNAAAVIGTPIAIGIA
HHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH
QQLNLPAEPFVLAVLFGANMSYATPMAYKTNLLVMTAGGYTFNDFLKIGIPLIIIMWVVL
HHCCCCCCHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
SWTLTILYDL
HHHHHHHCCC
>Mature Secondary Structure 
PLVTSVNSHSIAVMLLTLLALFLFSREKIPLETSSLFIIVALTVGFTIFPYQYQNTAIH
CCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEHHCCEEEEEEECCCEEE
AIDFFSGFGHEALIAVCALMVAGQGLVRTGALEPVGRLLSRLWSVYPKLSLLLTLILGAT
EEHHHHCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAFVNNVPIVILLLPILTTVSIRTNTSASKVLMPMGFATLIGGMSTTIGTSTNLLVVSV
HHHHHCCCCHHHHHHHHHHEEEEECCCCHHHHHHHCCHHHHHCCCHHCCCCCCCEEEEEE
AVDMGLKSFAMFDFFLPVAVAGAFAIAYLWLVVPYFIKERKPPFSDTSPRIFTAKLMIPA
EHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECC
DSVSENQALEQLVAKTDGMMRVLRIHRNSSDIYLLPNSKTIIKADDMLVVEDTPENLKSF
CCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCEEEEECCEEEEECCCHHHHHH
ETILGAVLYTSLGAVDEAHPLMEKEQQIAEVIISQGSRLNNTMLSQTRFLERHNLVALAL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEE
HRPGKKTETLFKGMADIYLKVGDVLLIQGKSEHIVELKKNRELLVLDATSDLTHSKQAPW
ECCCCHHHHHHHHHHHHHHEECCEEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCCCCH
AFFIMFTIIAISALGILPIAISATLGVFLMFVTSCINWKDASNALNTQVILIVVASLALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
QALLKTGAASYLAHLFILATEGSSTTFMLSGLMLLMAIMTNIVSNNAAAVIGTPIAIGIA
HHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH
QQLNLPAEPFVLAVLFGANMSYATPMAYKTNLLVMTAGGYTFNDFLKIGIPLIIIMWVVL
HHCCCCCCHHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
SWTLTILYDL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]