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The map label for this gene is 119944976

Identifier: 119944976

GI number: 119944976

Start: 1528348

End: 1528875

Strand: Reverse

Name: 119944976

Synonym: Ping_1227

Alternate gene names: NA

Gene position: 1528875-1528348 (Counterclockwise)

Preceding gene: 119944990

Following gene: 119944974

Centisome position: 33.53

GC content: 41.29

Gene sequence:

>528_bases
ATGAAAGCACAATCAATGATTTGGGATCCACTCGTTCGTTTTTTTCATTGGACAGTGGCAGCCTCGTTTCTGCTCAACTT
CCTGATTTTTGAAGAAGGTGAAACAAACCATCGCTGGGCTGGTTATTATATTTTAGCCGCCTTGGCAATTCGTATACTAT
GGGGGTTTATTGGCTCTAAAAATGCGCGTTTTAAAGACTTTTTACCAACGTCTAGTGGCATTAAGCAGCATTTAAATTTA
CTTATATCAGGACGGTTCGAAGTCTCAGAGGGTCATACTCCTCTTGGTGGCTTAATGGTCTTCGCATTATTATTTTGCCT
GTTAAGCACCGGTCTCTCCGGTTGGATGACGGAGTTAGATGTATTCTGGGTAGGTGATTGGCTTGAGGAGATACATGAGT
TCTTAGCAAGCACAACCATGACCTTAGTGGTTATTCATGTGTCGGCAGTTTTCTTGTTAAGCAAATTTGGTCCTGTAAAT
TTAATTAAGCAAATGATCACCGGACAACGGGACAACTGTTCTAAATAG

Upstream 100 bases:

>100_bases
TTAGGGTTATAACCAAAAAACAAAGAGTAGAAATATATTTCCACCCGAAAGCGCTGAAATTCTCAAACAAGAAATAGACG
ACTAATAACAGGTAATGACT

Downstream 100 bases:

>100_bases
CATTTTAATCACTCCCCTTCATAGTACAGCATGATTAATTTGTAATCGGGCCTTACAAAAGTTCAGATCATCAATCAATC
GTAATACGCCACACAGTTAT

Product: cytochrome B561

Products: NA

Alternate protein names: Cytochrome; Hydrogenase Cytochrome B-Type Subunit; B-Type Cytochrome; Nickel-Dependent Hydrogenase Cytochrome B-Type Subunit; Cytochrome B/B6 Domain; Nickel-Dependent Hydrogenase Cytochrome B Subunit; Cytochrome B Oxidoreductase Protein; Hydrogenase Cytochrome B-Type Subunit Protein; Cytochrome C Family Protein; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKAQSMIWDPLVRFFHWTVAASFLLNFLIFEEGETNHRWAGYYILAALAIRILWGFIGSKNARFKDFLPTSSGIKQHLNL
LISGRFEVSEGHTPLGGLMVFALLFCLLSTGLSGWMTELDVFWVGDWLEEIHEFLASTTMTLVVIHVSAVFLLSKFGPVN
LIKQMITGQRDNCSK

Sequences:

>Translated_175_residues
MKAQSMIWDPLVRFFHWTVAASFLLNFLIFEEGETNHRWAGYYILAALAIRILWGFIGSKNARFKDFLPTSSGIKQHLNL
LISGRFEVSEGHTPLGGLMVFALLFCLLSTGLSGWMTELDVFWVGDWLEEIHEFLASTTMTLVVIHVSAVFLLSKFGPVN
LIKQMITGQRDNCSK
>Mature_175_residues
MKAQSMIWDPLVRFFHWTVAASFLLNFLIFEEGETNHRWAGYYILAALAIRILWGFIGSKNARFKDFLPTSSGIKQHLNL
LISGRFEVSEGHTPLGGLMVFALLFCLLSTGLSGWMTELDVFWVGDWLEEIHEFLASTTMTLVVIHVSAVFLLSKFGPVN
LIKQMITGQRDNCSK

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19830; Mature: 19830

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQSMIWDPLVRFFHWTVAASFLLNFLIFEEGETNHRWAGYYILAALAIRILWGFIGSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
NARFKDFLPTSSGIKQHLNLLISGRFEVSEGHTPLGGLMVFALLFCLLSTGLSGWMTELD
CCCHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
VFWVGDWLEEIHEFLASTTMTLVVIHVSAVFLLSKFGPVNLIKQMITGQRDNCSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKAQSMIWDPLVRFFHWTVAASFLLNFLIFEEGETNHRWAGYYILAALAIRILWGFIGSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
NARFKDFLPTSSGIKQHLNLLISGRFEVSEGHTPLGGLMVFALLFCLLSTGLSGWMTELD
CCCHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
VFWVGDWLEEIHEFLASTTMTLVVIHVSAVFLLSKFGPVNLIKQMITGQRDNCSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA