| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944971
Identifier: 119944971
GI number: 119944971
Start: 1525637
End: 1526431
Strand: Direct
Name: 119944971
Synonym: Ping_1221
Alternate gene names: NA
Gene position: 1525637-1526431 (Clockwise)
Preceding gene: 119944970
Following gene: 119944972
Centisome position: 33.46
GC content: 41.38
Gene sequence:
>795_bases ATGATAAGTCTGGCGCAATTCTTTAATACTTTTATTGACACAGTTGTTGACGTTATTCCTATTGCGACCATCATTTTCGG GTTCCAAATTGTGGTGTTAAGAAAGCCTATAGCAAATTTGCACCGGGTTATATTGGGTTTTTTCTACGTAATTTTAGGAT TGACGCTGTTTTTGTTGGGGTTGGAGTTAGCACTTTTTCCCTTGGGTGAAACCATGGCGAAGCAGCTGACCGCACCAGAA TTTCTTTACTCTCTTAAAGATGATATTACAGAGTCTCTGAGCTGGATTGACTATTATTGGGTTTATCTATTCGCATTTGC TATCGGATTTAGCACCACCATTGCAGAGCCTTCGTTAATTGCCGTTGCGATAAAAGCCAATCAGGTTTCAGGTGGGGCGA TTAGGGTTAATGGTTTGCGTATTGCCGTAGCGTTAGGTGTCGCGATTGGAATTTCGTTAGGGAGTTACAGGATTGTGGTG GGTGACCCTATTCATTATTACATTATGGCTGGTTATACAGTGGTTATTATACAAACAAATTTTGCGCCAAAACAGATAAT AGCACTCGCCTATGATTCTGGTGGTGTTACAACATCTACGGTGACAGTGCCGTTGGTCACCGCATTAGGTTTAGGCTTAG CTTCCCAAGTGCCGGGAAGAAACCCTGTTATTGATGGTTTTGGATTGGTCGCATTTGCCAGTCTGTTTCCCATTATTTCA GTAATGGCATATGCTCAAATTACTCAATGGCTAAATTCAAGAGCATCTTCTAAGGAGAATGATAATGCGCTTTAA
Upstream 100 bases:
>100_bases CCATTAAAGGTCGAAATCCTATGGTGGACGGGTTTGGTTTGATTGCATTTGCTTCGCTGTTACCAATGATTTTTGTGATG CTCTATGGAATGTTTTTATC
Downstream 100 bases:
>100_bases ACTAATAATTGCCTTTGTAGAAGATACAAGGACAGATGCTGTCTTAGATGCGGCGCGCAAAGCAGGAGCGACCGGCGCAA CCGTCATTAATAACGCGAGA
Product: ABC transporter for copper permease protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MISLAQFFNTFIDTVVDVIPIATIIFGFQIVVLRKPIANLHRVILGFFYVILGLTLFLLGLELALFPLGETMAKQLTAPE FLYSLKDDITESLSWIDYYWVYLFAFAIGFSTTIAEPSLIAVAIKANQVSGGAIRVNGLRIAVALGVAIGISLGSYRIVV GDPIHYYIMAGYTVVIIQTNFAPKQIIALAYDSGGVTTSTVTVPLVTALGLGLASQVPGRNPVIDGFGLVAFASLFPIIS VMAYAQITQWLNSRASSKENDNAL
Sequences:
>Translated_264_residues MISLAQFFNTFIDTVVDVIPIATIIFGFQIVVLRKPIANLHRVILGFFYVILGLTLFLLGLELALFPLGETMAKQLTAPE FLYSLKDDITESLSWIDYYWVYLFAFAIGFSTTIAEPSLIAVAIKANQVSGGAIRVNGLRIAVALGVAIGISLGSYRIVV GDPIHYYIMAGYTVVIIQTNFAPKQIIALAYDSGGVTTSTVTVPLVTALGLGLASQVPGRNPVIDGFGLVAFASLFPIIS VMAYAQITQWLNSRASSKENDNAL >Mature_264_residues MISLAQFFNTFIDTVVDVIPIATIIFGFQIVVLRKPIANLHRVILGFFYVILGLTLFLLGLELALFPLGETMAKQLTAPE FLYSLKDDITESLSWIDYYWVYLFAFAIGFSTTIAEPSLIAVAIKANQVSGGAIRVNGLRIAVALGVAIGISLGSYRIVV GDPIHYYIMAGYTVVIIQTNFAPKQIIALAYDSGGVTTSTVTVPLVTALGLGLASQVPGRNPVIDGFGLVAFASLFPIIS VMAYAQITQWLNSRASSKENDNAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28476; Mature: 28476
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLAQFFNTFIDTVVDVIPIATIIFGFQIVVLRKPIANLHRVILGFFYVILGLTLFLLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LELALFPLGETMAKQLTAPEFLYSLKDDITESLSWIDYYWVYLFAFAIGFSTTIAEPSLI HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AVAIKANQVSGGAIRVNGLRIAVALGVAIGISLGSYRIVVGDPIHYYIMAGYTVVIIQTN EEEEEECCCCCCEEEECCEEHHHHHHHHHHCCCCCEEEEECCCCEEEEEECEEEEEEEEC FAPKQIIALAYDSGGVTTSTVTVPLVTALGLGLASQVPGRNPVIDGFGLVAFASLFPIIS CCCHHEEEEEECCCCCEEHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH VMAYAQITQWLNSRASSKENDNAL HHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MISLAQFFNTFIDTVVDVIPIATIIFGFQIVVLRKPIANLHRVILGFFYVILGLTLFLLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LELALFPLGETMAKQLTAPEFLYSLKDDITESLSWIDYYWVYLFAFAIGFSTTIAEPSLI HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AVAIKANQVSGGAIRVNGLRIAVALGVAIGISLGSYRIVVGDPIHYYIMAGYTVVIIQTN EEEEEECCCCCCEEEECCEEHHHHHHHHHHCCCCCEEEEECCCCEEEEEECEEEEEEEEC FAPKQIIALAYDSGGVTTSTVTVPLVTALGLGLASQVPGRNPVIDGFGLVAFASLFPIIS CCCHHEEEEEECCCCCEEHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHH VMAYAQITQWLNSRASSKENDNAL HHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA