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The map label for this gene is hypC [H]

Identifier: 119944962

GI number: 119944962

Start: 1514677

End: 1514931

Strand: Reverse

Name: hypC [H]

Synonym: Ping_1211

Alternate gene names: 119944962

Gene position: 1514931-1514677 (Counterclockwise)

Preceding gene: 119944963

Following gene: 119944961

Centisome position: 33.23

GC content: 42.35

Gene sequence:

>255_bases
ATGATAATAAGAGAGCAGACTATGTGCCTAGCAATCCCTGGACAAGTTATTTCAATTAATCAATCAGCTTCGCCGATCAC
AGCAAAAGTTAATTTCAGCGGGATCATAAGAGAGGTCGTTGTTGAATGGATTGATCAAGTTGCAGTGAACGACTACGTGA
TTGTTCATGCCGGATTTGCCATCAGCAAACTGGATCAACAGGCGGCCTTAGAAACCCTGCAGCTTTTTGAACAATTTGAA
CAGCAGCAGGAATAA

Upstream 100 bases:

>100_bases
TTAAAATCATCCCCCTTTCCGCTACTTCCGGTGAGAATATGGAACAATTGAAGGATTGGTTGATTGCCGGAAAAGCGGAG
CTTCAATCAGGTTAAAGAAA

Downstream 100 bases:

>100_bases
ATCCTGCCGGCATAAAAAACAAAAATAAGGATCAGTTATGGCATCAGCAAGCATTAAAATGGCGCATGGCAGCGGCGGCC
GCCTTTCCAATGAACTTATT

Product: hydrogenase assembly chaperone hypC/hupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MIIREQTMCLAIPGQVISINQSASPITAKVNFSGIIREVVVEWIDQVAVNDYVIVHAGFAISKLDQQAALETLQLFEQFE
QQQE

Sequences:

>Translated_84_residues
MIIREQTMCLAIPGQVISINQSASPITAKVNFSGIIREVVVEWIDQVAVNDYVIVHAGFAISKLDQQAALETLQLFEQFE
QQQE
>Mature_84_residues
MIIREQTMCLAIPGQVISINQSASPITAKVNFSGIIREVVVEWIDQVAVNDYVIVHAGFAISKLDQQAALETLQLFEQFE
QQQE

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 9404; Mature: 9404

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIREQTMCLAIPGQVISINQSASPITAKVNFSGIIREVVVEWIDQVAVNDYVIVHAGFA
CCCCCCCEEEEECCEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCH
ISKLDQQAALETLQLFEQFEQQQE
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIREQTMCLAIPGQVISINQSASPITAKVNFSGIIREVVVEWIDQVAVNDYVIVHAGFA
CCCCCCCEEEEECCEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCH
ISKLDQQAALETLQLFEQFEQQQE
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]