Click here to switch to the map view.

The map label for this gene is yceJ [H]

Identifier: 119944800

GI number: 119944800

Start: 1314946

End: 1315473

Strand: Reverse

Name: yceJ [H]

Synonym: Ping_1042

Alternate gene names: 119944800

Gene position: 1315473-1314946 (Counterclockwise)

Preceding gene: 119944801

Following gene: 119944799

Centisome position: 28.85

GC content: 39.77

Gene sequence:

>528_bases
ATGTCACAAGCAGTCACAAAATATAATATCACCGCTAAACTCCTGCATTGGGTTTCAGCTCTGTTAGTTATTGGCTTATT
TAGTTTAGGGCTGTGGATGGTTGATCTAACCTATTACAATGACTGGTATAATACAGCACCCTATATACATAAATCCGTTG
GCTTGTGTTTATTTGCACTGACCCTGATGCGGGTTGTCTGGAAACTGTTCACCGCCCATCCTGACATTGAAGGTCAAAAA
TGGGAAATTAAAGCGGCTAAAACAGCCCATTTCGCTCTTTACCTTTTATTATTCAGTCTTTTTATTGCGGGATACCTGAT
TTCAACAGCCGACGGTCGTGCGATAGCAGTGTTTAATTGGTTTTCCGTGCCCGGTTTTGGCTCGTTTATTGAAAACCAGG
AAGATATTGCTGGTATTATTCATTATTATCTGGCATTTACATTGATTGGCTTAGCCGCTTTGCACGCCTTAGCTGCCCTA
AAACATCACTTTATTAATAAAGATAATACACTCAAGAAAATGCTCTAA

Upstream 100 bases:

>100_bases
GAATAAACTATTCTACTTTTCTATCTTTGCTTATCAAATAGTTAATCTACAATGAACTTAATTAAAATTTTGTTAAGTTC
ACATTTAAAAAGGGCATTAA

Downstream 100 bases:

>100_bases
CTTAAACTCGAATAGGAATTAAATAATGAAAAAATCACTTATCGCAGCCGCACTCAGCACAGCGCTGTTTATGCCAACCT
TTGCCAACGCCGCTGATTAT

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSQAVTKYNITAKLLHWVSALLVIGLFSLGLWMVDLTYYNDWYNTAPYIHKSVGLCLFALTLMRVVWKLFTAHPDIEGQK
WEIKAAKTAHFALYLLLFSLFIAGYLISTADGRAIAVFNWFSVPGFGSFIENQEDIAGIIHYYLAFTLIGLAALHALAAL
KHHFINKDNTLKKML

Sequences:

>Translated_175_residues
MSQAVTKYNITAKLLHWVSALLVIGLFSLGLWMVDLTYYNDWYNTAPYIHKSVGLCLFALTLMRVVWKLFTAHPDIEGQK
WEIKAAKTAHFALYLLLFSLFIAGYLISTADGRAIAVFNWFSVPGFGSFIENQEDIAGIIHYYLAFTLIGLAALHALAAL
KHHFINKDNTLKKML
>Mature_174_residues
SQAVTKYNITAKLLHWVSALLVIGLFSLGLWMVDLTYYNDWYNTAPYIHKSVGLCLFALTLMRVVWKLFTAHPDIEGQKW
EIKAAKTAHFALYLLLFSLFIAGYLISTADGRAIAVFNWFSVPGFGSFIENQEDIAGIIHYYLAFTLIGLAALHALAALK
HHFINKDNTLKKML

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=176, Percent_Identity=45.4545454545455, Blast_Score=170, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 19802; Mature: 19670

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAVTKYNITAKLLHWVSALLVIGLFSLGLWMVDLTYYNDWYNTAPYIHKSVGLCLFAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TLMRVVWKLFTAHPDIEGQKWEIKAAKTAHFALYLLLFSLFIAGYLISTADGRAIAVFNW
HHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
FSVPGFGSFIENQEDIAGIIHYYLAFTLIGLAALHALAALKHHFINKDNTLKKML
CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure 
SQAVTKYNITAKLLHWVSALLVIGLFSLGLWMVDLTYYNDWYNTAPYIHKSVGLCLFAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TLMRVVWKLFTAHPDIEGQKWEIKAAKTAHFALYLLLFSLFIAGYLISTADGRAIAVFNW
HHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
FSVPGFGSFIENQEDIAGIIHYYLAFTLIGLAALHALAALKHHFINKDNTLKKML
CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]