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The map label for this gene is ybiT [H]

Identifier: 119944771

GI number: 119944771

Start: 1274344

End: 1275912

Strand: Reverse

Name: ybiT [H]

Synonym: Ping_1013

Alternate gene names: 119944771

Gene position: 1275912-1274344 (Counterclockwise)

Preceding gene: 119944772

Following gene: 119944769

Centisome position: 27.98

GC content: 40.73

Gene sequence:

>1569_bases
ATGCAGTTTGGCGCTGAGCCTTTGTTTGAAAATATTTCAGCTAAATTTAGTAAGGGCAACCGCTATGGTCTAATTGGCGC
GAATGGTTGCGGCAAATCTACTTTTATGAAAATCCTCAGTGGTGAGCAGGCACCAAGCTCAGGTAATGTGTCTCAGTCAG
TGGGGCTTAAAGTAGGTATTCTAAGCCAGGATCAATTTGCGTTTGAGCAATATAATGTTATTGATGTTGTCATAATGGGC
GATCTTGCATTATGGAAAGTTAAACAAGAACGTGATCGTATCTACGCAAAAGCTGAAATGACTGAAGCCGATGGGATGGC
TGTTGGCGAATTGGAAAGTGAATTTGCTGAAATGGATGGTTACACCGCAGAAAGTCGTGCCGGTGAAATTTTGTTATCCG
CGGGTATTGAAGAAGAATTTCATTTTGGCTTGATGCAGCAGGTTGCACCGGGTTGGAAATTACGTGTACTGCTTGCACAA
GCATTGTTTGCTAATCCCGACCTTCTGCTGCTTGATGAGCCTACCAATAACCTGGACATTAATACTATTGACTGGTTATC
GGGCGAGCTTAACCAGCGTAAATGTACCATGATCATTATTTCTCATGACCGACATTTTTTAAACTCAGTCTGTACACATA
TGGCTGATATTGATTACGGTGAATTACGTATTTACCCCGGTAATTATGAATACTTTATGGCCGCAGCAGGTTTGATTCGT
GAACAATTATTGGCCGAAAATTCCAAGAAAAGTGCTGAAATTAACGAATTACAAGACTTTGTTAACCGCTTTGGCGCCAA
TGCCTCTAAAGCAAAACAGGCGAGTTCGCGCGCTAAAAAGATGGATAAAATTAAACTTGATGAAGTTAAACCATCAAGTC
GTATGTCACCTTCATTGAGTTTTCCAGAGGGTAAAAAAATGCACCGCCAGGCATTAATACTGGAAGATATTGGCCACGGT
TTTGATGATCAGATGTTATTTGAAGGTGGTGAACTGATTTTAGAAGCCGGCGCAAAATTAGCCGTGATCGGTGAAAACGG
TGTGGGTAAATCCACTTTTCTGCGTTGTTTAGTGAATGAACTGCAAAACAAAGAAGGTGTGGTTAAGTGGTCTGAAAATG
CATCTGTTGGTTATTGCCCGCAGGATAGTACTGCTGACTTTGATAATGACTTAAATCTGTTTGATTGGATCTCACAGTGG
CGCACCATTAAACACGATGACCTTATCGTACGGGGTATGTTGGGCCGTTTATTATTTACCGCCGATGATGCTAATAAAAA
AGCCAGAAATTGCTCCGGTGGTGAAAAAAATCGCCTGCTATTTGGTAAGTTAATGATGCAGGATATTAATGTATTAGTCA
TGGATGAGCCGACTAACCACATGGATATCGAAGCGATTGATGCCTTAAATGATGCCCTGAAAGTTTATCAGGGTACCTTG
ATTTTTGTCAGTCATGACCGCAAATTTGTTTCATCGTTAGCGACGCGCATTATTGATATTAAAGATAAAAAATTGGTTAA
CTTCCAGGGTACTTATAATGAGTATGTTGCTAATCAACGTTTTGCTTAA

Upstream 100 bases:

>100_bases
TAAGGTAATTTTTTTTATATAACCTTACCTTTGAATTTAAAGAATTTTAAGAATTTTAACGTGGAGTGAACAAATTATCA
TTAGTACAGCTAACATCACT

Downstream 100 bases:

>100_bases
TAAAGCATCCTTTAAATAAAATTAAAAAGCACAGTCAGTTTTTCTGACTGTGCTTTTTTGTTTATAGCAAAGGAGTTAAT
TAATGGAATCGGTATTATGT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MQFGAEPLFENISAKFSKGNRYGLIGANGCGKSTFMKILSGEQAPSSGNVSQSVGLKVGILSQDQFAFEQYNVIDVVIMG
DLALWKVKQERDRIYAKAEMTEADGMAVGELESEFAEMDGYTAESRAGEILLSAGIEEEFHFGLMQQVAPGWKLRVLLAQ
ALFANPDLLLLDEPTNNLDINTIDWLSGELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFMAAAGLIR
EQLLAENSKKSAEINELQDFVNRFGANASKAKQASSRAKKMDKIKLDEVKPSSRMSPSLSFPEGKKMHRQALILEDIGHG
FDDQMLFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNELQNKEGVVKWSENASVGYCPQDSTADFDNDLNLFDWISQW
RTIKHDDLIVRGMLGRLLFTADDANKKARNCSGGEKNRLLFGKLMMQDINVLVMDEPTNHMDIEAIDALNDALKVYQGTL
IFVSHDRKFVSSLATRIIDIKDKKLVNFQGTYNEYVANQRFA

Sequences:

>Translated_522_residues
MQFGAEPLFENISAKFSKGNRYGLIGANGCGKSTFMKILSGEQAPSSGNVSQSVGLKVGILSQDQFAFEQYNVIDVVIMG
DLALWKVKQERDRIYAKAEMTEADGMAVGELESEFAEMDGYTAESRAGEILLSAGIEEEFHFGLMQQVAPGWKLRVLLAQ
ALFANPDLLLLDEPTNNLDINTIDWLSGELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFMAAAGLIR
EQLLAENSKKSAEINELQDFVNRFGANASKAKQASSRAKKMDKIKLDEVKPSSRMSPSLSFPEGKKMHRQALILEDIGHG
FDDQMLFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNELQNKEGVVKWSENASVGYCPQDSTADFDNDLNLFDWISQW
RTIKHDDLIVRGMLGRLLFTADDANKKARNCSGGEKNRLLFGKLMMQDINVLVMDEPTNHMDIEAIDALNDALKVYQGTL
IFVSHDRKFVSSLATRIIDIKDKKLVNFQGTYNEYVANQRFA
>Mature_522_residues
MQFGAEPLFENISAKFSKGNRYGLIGANGCGKSTFMKILSGEQAPSSGNVSQSVGLKVGILSQDQFAFEQYNVIDVVIMG
DLALWKVKQERDRIYAKAEMTEADGMAVGELESEFAEMDGYTAESRAGEILLSAGIEEEFHFGLMQQVAPGWKLRVLLAQ
ALFANPDLLLLDEPTNNLDINTIDWLSGELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFMAAAGLIR
EQLLAENSKKSAEINELQDFVNRFGANASKAKQASSRAKKMDKIKLDEVKPSSRMSPSLSFPEGKKMHRQALILEDIGHG
FDDQMLFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNELQNKEGVVKWSENASVGYCPQDSTADFDNDLNLFDWISQW
RTIKHDDLIVRGMLGRLLFTADDANKKARNCSGGEKNRLLFGKLMMQDINVLVMDEPTNHMDIEAIDALNDALKVYQGTL
IFVSHDRKFVSSLATRIIDIKDKKLVNFQGTYNEYVANQRFA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=526, Percent_Identity=30.0380228136882, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI27881506, Length=527, Percent_Identity=27.5142314990512, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI10947137, Length=527, Percent_Identity=27.5142314990512, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI10947135, Length=526, Percent_Identity=27.3764258555133, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI69354671, Length=526, Percent_Identity=27.3764258555133, Blast_Score=201, Evalue=1e-51,
Organism=Escherichia coli, GI1787041, Length=519, Percent_Identity=63.0057803468208, Blast_Score=690, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=519, Percent_Identity=31.0211946050096, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1787182, Length=505, Percent_Identity=30.2970297029703, Blast_Score=220, Evalue=2e-58,
Organism=Escherichia coli, GI2367384, Length=520, Percent_Identity=28.0769230769231, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI1788165, Length=181, Percent_Identity=28.1767955801105, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787500, Length=216, Percent_Identity=23.1481481481481, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87081709, Length=215, Percent_Identity=24.6511627906977, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1787029, Length=228, Percent_Identity=25, Blast_Score=66, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17553372, Length=528, Percent_Identity=30.6818181818182, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI17555318, Length=533, Percent_Identity=27.2045028142589, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17559834, Length=530, Percent_Identity=26.6037735849057, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI193202349, Length=208, Percent_Identity=27.8846153846154, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=526, Percent_Identity=30.9885931558935, Blast_Score=251, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6321121, Length=531, Percent_Identity=29.9435028248588, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6324314, Length=407, Percent_Identity=25.3071253071253, Blast_Score=113, Evalue=8e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=24.4791666666667, Blast_Score=103, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6323278, Length=233, Percent_Identity=27.8969957081545, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24666836, Length=522, Percent_Identity=30.0766283524904, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI24641342, Length=523, Percent_Identity=29.6367112810707, Blast_Score=235, Evalue=4e-62,
Organism=Drosophila melanogaster, GI24642252, Length=530, Percent_Identity=28.3018867924528, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI18859989, Length=530, Percent_Identity=28.3018867924528, Blast_Score=233, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58256; Mature: 58256

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFGAEPLFENISAKFSKGNRYGLIGANGCGKSTFMKILSGEQAPSSGNVSQSVGLKVGI
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
LSQDQFAFEQYNVIDVVIMGDLALWKVKQERDRIYAKAEMTEADGMAVGELESEFAEMDG
ECCCCHHHHHCCEEEEEEECCHHEEHHHHHHHHEEEEEECCCCCCCEEHHHHHHHHHHCC
YTAESRAGEILLSAGIEEEFHFGLMQQVAPGWKLRVLLAQALFANPDLLLLDEPTNNLDI
CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC
NTIDWLSGELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFMAAAGLIR
CEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
EQLLAENSKKSAEINELQDFVNRFGANASKAKQASSRAKKMDKIKLDEVKPSSRMSPSLS
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FPEGKKMHRQALILEDIGHGFDDQMLFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNE
CCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHH
LQNKEGVVKWSENASVGYCPQDSTADFDNDLNLFDWISQWRTIKHDDLIVRGMLGRLLFT
HCCCCCCEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHEEE
ADDANKKARNCSGGEKNRLLFGKLMMQDINVLVMDEPTNHMDIEAIDALNDALKVYQGTL
ECCCCCHHCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE
IFVSHDRKFVSSLATRIIDIKDKKLVNFQGTYNEYVANQRFA
EEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCC
>Mature Secondary Structure
MQFGAEPLFENISAKFSKGNRYGLIGANGCGKSTFMKILSGEQAPSSGNVSQSVGLKVGI
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
LSQDQFAFEQYNVIDVVIMGDLALWKVKQERDRIYAKAEMTEADGMAVGELESEFAEMDG
ECCCCHHHHHCCEEEEEEECCHHEEHHHHHHHHEEEEEECCCCCCCEEHHHHHHHHHHCC
YTAESRAGEILLSAGIEEEFHFGLMQQVAPGWKLRVLLAQALFANPDLLLLDEPTNNLDI
CCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC
NTIDWLSGELNQRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEYFMAAAGLIR
CEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
EQLLAENSKKSAEINELQDFVNRFGANASKAKQASSRAKKMDKIKLDEVKPSSRMSPSLS
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FPEGKKMHRQALILEDIGHGFDDQMLFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNE
CCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHH
LQNKEGVVKWSENASVGYCPQDSTADFDNDLNLFDWISQWRTIKHDDLIVRGMLGRLLFT
HCCCCCCEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHEEE
ADDANKKARNCSGGEKNRLLFGKLMMQDINVLVMDEPTNHMDIEAIDALNDALKVYQGTL
ECCCCCHHCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE
IFVSHDRKFVSSLATRIIDIKDKKLVNFQGTYNEYVANQRFA
EEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]