| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944750
Identifier: 119944750
GI number: 119944750
Start: 1250582
End: 1251025
Strand: Reverse
Name: 119944750
Synonym: Ping_0992
Alternate gene names: NA
Gene position: 1251025-1250582 (Counterclockwise)
Preceding gene: 119944751
Following gene: 119944745
Centisome position: 27.44
GC content: 35.14
Gene sequence:
>444_bases ATGGTATTCCAAGTGACAGAATTAACCCTTACAGCTATTAGCAAGCAATTGACTGCATTAAATTTCAATGCGGATAAAAT CAAAATTATAACCGTCAGTGCAATGGATGAGGCCGCTTTAAACAACTGTACCAGTAAAGAAAATGAGAGTTTTTACAACA GTTATATGAATGTCATTTATCGCCGCGGTGAAAGGTATGTACTTGGTTACCGTTGTGAAGACCCTTTGCTTGAACATGCC ATCATTAAAATTGGGGATCGCTACTTTGATCCGACACAACAGGCGAATAGTGAATTTATCCCCTATCAGTTTGCTGTATT AACTGAGTTTAAAATCTTCGATATGATGAAACATGCCAAAACAAACAAAGATTTTCCGCCTGATATTGATTACTTGCTGA CCAAGAAAAAACATTTCAAAAATATTATTAATAGCGAAAAATAA
Upstream 100 bases:
>100_bases TTCTTAGTAAAGGGCTTGATTTGTCTTGGTAAAGGACTCGCGCGTTTAAGTGCGTTCAGAGAAATATTAAAGTATAATAT CGGCGATTTTTATTAACCAG
Downstream 100 bases:
>100_bases AAAATCCTGTTCGTATAAAAAAAAACCATACGCTCAATTTGACTTTATCAGCGTATGGTTTTCAGATTAAGAATAAGCCA GTGCAATATTAATTAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MVFQVTELTLTAISKQLTALNFNADKIKIITVSAMDEAALNNCTSKENESFYNSYMNVIYRRGERYVLGYRCEDPLLEHA IIKIGDRYFDPTQQANSEFIPYQFAVLTEFKIFDMMKHAKTNKDFPPDIDYLLTKKKHFKNIINSEK
Sequences:
>Translated_147_residues MVFQVTELTLTAISKQLTALNFNADKIKIITVSAMDEAALNNCTSKENESFYNSYMNVIYRRGERYVLGYRCEDPLLEHA IIKIGDRYFDPTQQANSEFIPYQFAVLTEFKIFDMMKHAKTNKDFPPDIDYLLTKKKHFKNIINSEK >Mature_147_residues MVFQVTELTLTAISKQLTALNFNADKIKIITVSAMDEAALNNCTSKENESFYNSYMNVIYRRGERYVLGYRCEDPLLEHA IIKIGDRYFDPTQQANSEFIPYQFAVLTEFKIFDMMKHAKTNKDFPPDIDYLLTKKKHFKNIINSEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17166; Mature: 17166
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFQVTELTLTAISKQLTALNFNADKIKIITVSAMDEAALNNCTSKENESFYNSYMNVIY CEEEEHHHHHHHHHHHHHEEECCCCEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHH RRGERYVLGYRCEDPLLEHAIIKIGDRYFDPTQQANSEFIPYQFAVLTEFKIFDMMKHAK HCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHHC TNKDFPPDIDYLLTKKKHFKNIINSEK CCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVFQVTELTLTAISKQLTALNFNADKIKIITVSAMDEAALNNCTSKENESFYNSYMNVIY CEEEEHHHHHHHHHHHHHEEECCCCEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHH RRGERYVLGYRCEDPLLEHAIIKIGDRYFDPTQQANSEFIPYQFAVLTEFKIFDMMKHAK HCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHHC TNKDFPPDIDYLLTKKKHFKNIINSEK CCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA