Click here to switch to the map view.

The map label for this gene is scrA [H]

Identifier: 119944731

GI number: 119944731

Start: 1220122

End: 1221579

Strand: Reverse

Name: scrA [H]

Synonym: Ping_0972

Alternate gene names: 119944731

Gene position: 1221579-1220122 (Counterclockwise)

Preceding gene: 119944734

Following gene: 119944730

Centisome position: 26.79

GC content: 45.88

Gene sequence:

>1458_bases
ATGAATTACCCTAAAGTTGCAAGCCAGCTAATAGAAATGCTTGGCGGTAAAGATAATATTAAAGCACTGGCGCATTGTGC
TACGCGTTTACGTCTTGCGATTAACGACGAATCCCTGATTAATGAACAAGGCATTGGCGAACTTGAAGGTGTTAAAGGCC
AGTTTAAGGTCGCAGGTCAATACCAAATCATTTTTGGTTCCGGCATCGTTAACCAGGTTTATACGCAGATGACAAAACTG
ACTGGTATAGATGAGATGAGCACCAAGGATGTTGCCTCTGCAGGTGCCGAGAAACAAAATATTATCCAACAAGCGGTTAA
AGGCTTGTCAGATATATTTGTCCCTATTATTCCGGCAATCGTTGCCGGCGGCCTGTTAATGGGTATCTTTAACCTGTTAG
TCGCACCGGGATTATTTATTGACGGACTGTCACTGGTTGAAGCGAATCCGGGGTTAGCCGATCTTGCTGCAATGATTAAT
ACCTTTGCTAATGCGCCCTTTGTATACCTTCCTATTCTTATCGCATTTTCTGCCAGTAAAAAGTTTGGTGGCAACCCCTA
TTTAGGCGCTGCGCTAGGCATGTTGATGGTTCACCCGGACTTACTTAATGGTTGGGGATTCGGTGGTGCAGCGGTTGCCG
GTGATATTCCGGTTTGGAATATCCTTGGTTTTGAAATCCAAAAAGTGGGTTATCAGGGGTCTGTATTACCGGTATTAGTC
GCAGCCTTTATTCTAGCCAAAATTGAAAATGGCCTGCGCAGATTTATCCCATCGGTGTTAGATAACCTTCTAACTCCCCT
GCTTGCTCTCTTTATCACCGGTGTGCTTACCTTTACCATTGTCGGTCCCTTCACCCGTGATCTTGGCTTCCTGCTGGGTG
ACGGTCTGAACTGGTTATACGATTCTGCAGGTTTCATCGGTGGCGCCCTCTTTGGCTTCATCTACGCTCCCTTTGTCATA
ACAGGTATGCATCACAGCTTTATCGCGATTGAAATTCAACTGCTTGCTGATATTGCAGTGACGGGCGGTACCTTTATCTT
CCCTATTGCAGCAATGTCAAATATTGCCCAAGGCGGTGCTGCATTAGCCGTCGGATTTACAACCAAAGATATCAAAATGA
AAGGTATTGCAATGCCATCCGGTGTGACGGCGCTGCTGGGTATTACCGAGCCGGCTCTGTTTGGTGTTAACTTGAAACTT
CGCTATCCGTTTATTGCGGCAATTTGTGCAGCAGCCGCTGCAAGTGCATTTATTACACTCTTTAATGTGAAAGCCAGTGC
GCTAGGCGCAGCCGGTCTACCGGGCATTATCTCTATTCGTCAAGGCGATGTGACACCTTATGTTATGGGCATGGCGATTT
CATTTGCAAGCGCATTTGTGCTAACAGTAATACTCGGTAAACGTGCTGACGCGAAAAATAAAAAACAAGCTGAAGTAATC
CAACAAGCGACGGCATAA

Upstream 100 bases:

>100_bases
GGCTGCCTGAATATGCGTTTAGCAAACGTTCCCAAAAAACAATTAATAACCTTTTGTAAGTAGCATGACTATTACAGAAA
TGATCATACGGAGTATAAAG

Downstream 100 bases:

>100_bases
TAGTCATTGGTTAGATATTATTTGAAAAACCAGTAGTGCTTATCAGATACTGGTTTTTCTGTATCAAAAACAGTATTCTC
AATAAAATACTGGTTTTTTA

Product: PTS system, sucrose-specific IIBC subunit

Products: NA

Alternate protein names: EIIBC-Scr; EII-Scr; Sucrose-specific phosphotransferase enzyme IIB component; PTS system sucrose-specific EIIB component; Sucrose permease IIC component; PTS system sucrose-specific EIIC component [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MNYPKVASQLIEMLGGKDNIKALAHCATRLRLAINDESLINEQGIGELEGVKGQFKVAGQYQIIFGSGIVNQVYTQMTKL
TGIDEMSTKDVASAGAEKQNIIQQAVKGLSDIFVPIIPAIVAGGLLMGIFNLLVAPGLFIDGLSLVEANPGLADLAAMIN
TFANAPFVYLPILIAFSASKKFGGNPYLGAALGMLMVHPDLLNGWGFGGAAVAGDIPVWNILGFEIQKVGYQGSVLPVLV
AAFILAKIENGLRRFIPSVLDNLLTPLLALFITGVLTFTIVGPFTRDLGFLLGDGLNWLYDSAGFIGGALFGFIYAPFVI
TGMHHSFIAIEIQLLADIAVTGGTFIFPIAAMSNIAQGGAALAVGFTTKDIKMKGIAMPSGVTALLGITEPALFGVNLKL
RYPFIAAICAAAAASAFITLFNVKASALGAAGLPGIISIRQGDVTPYVMGMAISFASAFVLTVILGKRADAKNKKQAEVI
QQATA

Sequences:

>Translated_485_residues
MNYPKVASQLIEMLGGKDNIKALAHCATRLRLAINDESLINEQGIGELEGVKGQFKVAGQYQIIFGSGIVNQVYTQMTKL
TGIDEMSTKDVASAGAEKQNIIQQAVKGLSDIFVPIIPAIVAGGLLMGIFNLLVAPGLFIDGLSLVEANPGLADLAAMIN
TFANAPFVYLPILIAFSASKKFGGNPYLGAALGMLMVHPDLLNGWGFGGAAVAGDIPVWNILGFEIQKVGYQGSVLPVLV
AAFILAKIENGLRRFIPSVLDNLLTPLLALFITGVLTFTIVGPFTRDLGFLLGDGLNWLYDSAGFIGGALFGFIYAPFVI
TGMHHSFIAIEIQLLADIAVTGGTFIFPIAAMSNIAQGGAALAVGFTTKDIKMKGIAMPSGVTALLGITEPALFGVNLKL
RYPFIAAICAAAAASAFITLFNVKASALGAAGLPGIISIRQGDVTPYVMGMAISFASAFVLTVILGKRADAKNKKQAEVI
QQATA
>Mature_485_residues
MNYPKVASQLIEMLGGKDNIKALAHCATRLRLAINDESLINEQGIGELEGVKGQFKVAGQYQIIFGSGIVNQVYTQMTKL
TGIDEMSTKDVASAGAEKQNIIQQAVKGLSDIFVPIIPAIVAGGLLMGIFNLLVAPGLFIDGLSLVEANPGLADLAAMIN
TFANAPFVYLPILIAFSASKKFGGNPYLGAALGMLMVHPDLLNGWGFGGAAVAGDIPVWNILGFEIQKVGYQGSVLPVLV
AAFILAKIENGLRRFIPSVLDNLLTPLLALFITGVLTFTIVGPFTRDLGFLLGDGLNWLYDSAGFIGGALFGFIYAPFVI
TGMHHSFIAIEIQLLADIAVTGGTFIFPIAAMSNIAQGGAALAVGFTTKDIKMKGIAMPSGVTALLGITEPALFGVNLKL
RYPFIAAICAAAAASAFITLFNVKASALGAAGLPGIISIRQGDVTPYVMGMAISFASAFVLTVILGKRADAKNKKQAEVI
QQATA

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG1263

COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI2367362, Length=439, Percent_Identity=35.9908883826879, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1790159, Length=491, Percent_Identity=30.3462321792261, Blast_Score=214, Evalue=9e-57,
Organism=Escherichia coli, GI48994906, Length=495, Percent_Identity=28.2828282828283, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1788769, Length=498, Percent_Identity=30.7228915662651, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018113
- InterPro:   IPR004719
- InterPro:   IPR001996
- InterPro:   IPR003352
- InterPro:   IPR013013
- InterPro:   IPR011535
- InterPro:   IPR010973 [H]

Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 50743; Mature: 50743

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYPKVASQLIEMLGGKDNIKALAHCATRLRLAINDESLINEQGIGELEGVKGQFKVAGQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCHHHHCCCCCCCCCCCCCCEEEECE
YQIIFGSGIVNQVYTQMTKLTGIDEMSTKDVASAGAEKQNIIQQAVKGLSDIFVPIIPAI
EEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAGGLLMGIFNLLVAPGLFIDGLSLVEANPGLADLAAMINTFANAPFVYLPILIAFSASK
HHHHHHHHHHHHHHCCCHHHCCCHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
KFGGNPYLGAALGMLMVHPDLLNGWGFGGAAVAGDIPVWNILGFEIQKVGYQGSVLPVLV
CCCCCCCHHHHHHHHHHCHHHHCCCCCCCCHHCCCCCEEHHHCHHHEECCCCCCHHHHHH
AAFILAKIENGLRRFIPSVLDNLLTPLLALFITGVLTFTIVGPFTRDLGFLLGDGLNWLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHH
DSAGFIGGALFGFIYAPFVITGMHHSFIAIEIQLLADIAVTGGTFIFPIAAMSNIAQGGA
HCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
ALAVGFTTKDIKMKGIAMPSGVTALLGITEPALFGVNLKLRYPFIAAICAAAAASAFITL
EEEEEEEECCEEEECEECCCCCHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHH
FNVKASALGAAGLPGIISIRQGDVTPYVMGMAISFASAFVLTVILGKRADAKNKKQAEVI
HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QQATA
HHHCC
>Mature Secondary Structure
MNYPKVASQLIEMLGGKDNIKALAHCATRLRLAINDESLINEQGIGELEGVKGQFKVAGQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCHHHHCCCCCCCCCCCCCCEEEECE
YQIIFGSGIVNQVYTQMTKLTGIDEMSTKDVASAGAEKQNIIQQAVKGLSDIFVPIIPAI
EEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAGGLLMGIFNLLVAPGLFIDGLSLVEANPGLADLAAMINTFANAPFVYLPILIAFSASK
HHHHHHHHHHHHHHCCCHHHCCCHHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
KFGGNPYLGAALGMLMVHPDLLNGWGFGGAAVAGDIPVWNILGFEIQKVGYQGSVLPVLV
CCCCCCCHHHHHHHHHHCHHHHCCCCCCCCHHCCCCCEEHHHCHHHEECCCCCCHHHHHH
AAFILAKIENGLRRFIPSVLDNLLTPLLALFITGVLTFTIVGPFTRDLGFLLGDGLNWLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHH
DSAGFIGGALFGFIYAPFVITGMHHSFIAIEIQLLADIAVTGGTFIFPIAAMSNIAQGGA
HCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
ALAVGFTTKDIKMKGIAMPSGVTALLGITEPALFGVNLKLRYPFIAAICAAAAASAFITL
EEEEEEEECCEEEECEECCCCCHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHH
FNVKASALGAAGLPGIISIRQGDVTPYVMGMAISFASAFVLTVILGKRADAKNKKQAEVI
HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QQATA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2174811; 2060795 [H]