| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944383
Identifier: 119944383
GI number: 119944383
Start: 792426
End: 793628
Strand: Direct
Name: 119944383
Synonym: Ping_0610
Alternate gene names: NA
Gene position: 792426-793628 (Clockwise)
Preceding gene: 119944382
Following gene: 119944389
Centisome position: 17.38
GC content: 42.48
Gene sequence:
>1203_bases ATGATCATTAAACCCAAGATTCGTGGCTTTATTTGTACAACAACTCACCCCGTGGGCTGCGAAAAAAATATACAGGCACA AATCGAATACACTAAACAACAAGGGAAAATTGCCAATGGCCCTAAACGTGTATTAGTGATTGGTTCTTCAGCAGGTTACG GTATGTCTTCGCGCGTTGCTGCAGCATACGGCAGCGATGCATCAACCATTGGTGTGTTTTTTGAAAAACCGGCAACGGAG AAAAAACCAGGATCTGCAGGTTGGTACAACAGTGCAGCTTTTGAAAAACAAGCAAAAGCGGATGGTTTATATGCTAAAAG TATTAATGGAGATGCCTTCTCTCACGAAATAAAAGCAAAAGTGGTTGAATTAATCAAACAAGACTTAGGCCAAATAGATG CGATTATCTACTCGGTTGCCGCGCCGGTTCGTAAATTACCGGATACTGGCGAAGTGATTCGATCAAGCTTAAAACCCATT GGTGAAACTTACATTTCAACGGCGATTGATACTAATAAAGATGTGATTATCAATGCAACGGTTGAACCGGCAACAGAAGA AGAAGTGGCTGATACCGTGACGGTAATGGGCGGACAGGACTGGGAGTTATGGTTAAGTGCGCTGGGCGAAGCCGGTGTAT TAGCTGAAGGCCTTAAAACCGTTGCTTACTCATACATTGGTACCGAGCTAACTTGGCCCATTTACTGGGATGGCGCATTG GGTAAAGCTAAAATAGATTTGGACCGGGCATCGACCGCTATTCAGGCGCAGCTTGCACCTCTTAATGGTGAAGCTTATGT TTCGGTACAAAAAAGTGTTGTCACCCAAGCAAGCTCTGCCATTCCTGTTATGCCGCTGTATATCTCCATGGTATTTAAAA TAATGAAAGAGAAAGGCCTTCACGAAGGTTGTATGGAGCAGATTTATCGTTTGTTTACCAGCCAACTTTATAAACAAGAC GGCAGTGCACCGGAAACGGATCAAGCTCGTCGTATACGTCTTGATGATTGGGAGTTACGTGATGATGTTCAACAGGCTTG TAAAGAATTATGGCCTAAAATTACCACGGAAAATTTGTTCGAATTAACCGATTATAAAGAATATAAAGAAGAATTTGTGC AACTTTTCGGTTTTTCTATAGATGGTGTGGACTATGATGCTGACGTTGATACTGTCGTTGAGTTTGACTGCCTTTCAGTT TAA
Upstream 100 bases:
>100_bases GTATTTTCAAGTGTTTTACCGGCAGCTATTTTGTGCAACTAAAAAAACAGTGTATATTACCCAAAACTCATATTAAATCT AACTTAGAAGAGCTCAAATT
Downstream 100 bases:
>100_bases AAAACGCAACATATCCTATTAAAAACAGCCGCTATTGTGGCTGTTTTTGTTAGTGCTTTGTTCAATAGACTCGGCTCTAG TCCTGGGTATTCATCATGCT
Product: trans-2-enoyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MIIKPKIRGFICTTTHPVGCEKNIQAQIEYTKQQGKIANGPKRVLVIGSSAGYGMSSRVAAAYGSDASTIGVFFEKPATE KKPGSAGWYNSAAFEKQAKADGLYAKSINGDAFSHEIKAKVVELIKQDLGQIDAIIYSVAAPVRKLPDTGEVIRSSLKPI GETYISTAIDTNKDVIINATVEPATEEEVADTVTVMGGQDWELWLSALGEAGVLAEGLKTVAYSYIGTELTWPIYWDGAL GKAKIDLDRASTAIQAQLAPLNGEAYVSVQKSVVTQASSAIPVMPLYISMVFKIMKEKGLHEGCMEQIYRLFTSQLYKQD GSAPETDQARRIRLDDWELRDDVQQACKELWPKITTENLFELTDYKEYKEEFVQLFGFSIDGVDYDADVDTVVEFDCLSV
Sequences:
>Translated_400_residues MIIKPKIRGFICTTTHPVGCEKNIQAQIEYTKQQGKIANGPKRVLVIGSSAGYGMSSRVAAAYGSDASTIGVFFEKPATE KKPGSAGWYNSAAFEKQAKADGLYAKSINGDAFSHEIKAKVVELIKQDLGQIDAIIYSVAAPVRKLPDTGEVIRSSLKPI GETYISTAIDTNKDVIINATVEPATEEEVADTVTVMGGQDWELWLSALGEAGVLAEGLKTVAYSYIGTELTWPIYWDGAL GKAKIDLDRASTAIQAQLAPLNGEAYVSVQKSVVTQASSAIPVMPLYISMVFKIMKEKGLHEGCMEQIYRLFTSQLYKQD GSAPETDQARRIRLDDWELRDDVQQACKELWPKITTENLFELTDYKEYKEEFVQLFGFSIDGVDYDADVDTVVEFDCLSV >Mature_400_residues MIIKPKIRGFICTTTHPVGCEKNIQAQIEYTKQQGKIANGPKRVLVIGSSAGYGMSSRVAAAYGSDASTIGVFFEKPATE KKPGSAGWYNSAAFEKQAKADGLYAKSINGDAFSHEIKAKVVELIKQDLGQIDAIIYSVAAPVRKLPDTGEVIRSSLKPI GETYISTAIDTNKDVIINATVEPATEEEVADTVTVMGGQDWELWLSALGEAGVLAEGLKTVAYSYIGTELTWPIYWDGAL GKAKIDLDRASTAIQAQLAPLNGEAYVSVQKSVVTQASSAIPVMPLYISMVFKIMKEKGLHEGCMEQIYRLFTSQLYKQD GSAPETDQARRIRLDDWELRDDVQQACKELWPKITTENLFELTDYKEYKEEFVQLFGFSIDGVDYDADVDTVVEFDCLSV
Specific function: Probable reductase
COG id: COG3007
COG function: function code S; Uncharacterized paraquat-inducible protein B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TER reductase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y610_PSYIN (A1SSJ9)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942063.1 - STRING: A1SSJ9 - GeneID: 4624347 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0610 - eggNOG: COG3007 - HOGENOM: HBG288357 - OMA: WELWINA - ProtClustDB: PRK13656 - BioCyc: PING357804:PING_0610-MONOMER - HAMAP: MF_01838 - InterPro: IPR010758
Pfam domain/function: PF07055 scADH
EC number: NA
Molecular weight: Translated: 43937; Mature: 43937
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKPKIRGFICTTTHPVGCEKNIQAQIEYTKQQGKIANGPKRVLVIGSSAGYGMSSRVA CCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCCCH AAYGSDASTIGVFFEKPATEKKPGSAGWYNSAAFEKQAKADGLYAKSINGDAFSHEIKAK HHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHH VVELIKQDLGQIDAIIYSVAAPVRKLPDTGEVIRSSLKPIGETYISTAIDTNKDVIINAT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE VEPATEEEVADTVTVMGGQDWELWLSALGEAGVLAEGLKTVAYSYIGTELTWPIYWDGAL CCCCCHHHHHHEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC GKAKIDLDRASTAIQAQLAPLNGEAYVSVQKSVVTQASSAIPVMPLYISMVFKIMKEKGL CCEEEEHHHHHHHHEEEEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC HEGCMEQIYRLFTSQLYKQDGSAPETDQARRIRLDDWELRDDVQQACKELWPKITTENLF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCHHH ELTDYKEYKEEFVQLFGFSIDGVDYDADVDTVVEFDCLSV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCC >Mature Secondary Structure MIIKPKIRGFICTTTHPVGCEKNIQAQIEYTKQQGKIANGPKRVLVIGSSAGYGMSSRVA CCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCCCCH AAYGSDASTIGVFFEKPATEKKPGSAGWYNSAAFEKQAKADGLYAKSINGDAFSHEIKAK HHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHH VVELIKQDLGQIDAIIYSVAAPVRKLPDTGEVIRSSLKPIGETYISTAIDTNKDVIINAT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE VEPATEEEVADTVTVMGGQDWELWLSALGEAGVLAEGLKTVAYSYIGTELTWPIYWDGAL CCCCCHHHHHHEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC GKAKIDLDRASTAIQAQLAPLNGEAYVSVQKSVVTQASSAIPVMPLYISMVFKIMKEKGL CCEEEEHHHHHHHHEEEEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC HEGCMEQIYRLFTSQLYKQDGSAPETDQARRIRLDDWELRDDVQQACKELWPKITTENLF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCHHH ELTDYKEYKEEFVQLFGFSIDGVDYDADVDTVVEFDCLSV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA