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The map label for this gene is visC [H]

Identifier: 119944382

GI number: 119944382

Start: 791039

End: 792241

Strand: Direct

Name: visC [H]

Synonym: Ping_0609

Alternate gene names: 119944382

Gene position: 791039-792241 (Clockwise)

Preceding gene: 119944381

Following gene: 119944383

Centisome position: 17.35

GC content: 43.06

Gene sequence:

>1203_bases
ATGATGCAATCATACGACTTAACCATAGTGGGCGGCGGAATTGTCGGGCTGACGTTGGCAGCCTCCCTAGCAGACAGTGC
ATTATCGATTGCGCTGATTGAAACCAGCAACAGGCCAATATTACCCGAAAAGCCAGTTAATCGAGTCAGTGCTATTAGCT
TCGCCAGTAAAAAGATTTTTGAAAAATTAAGCGTCTGGCAGCAGCTTGATAGTGGAAGAATAACGGCATACGACAGCATG
CTGGTCTGGGACAAGGATAGTTTTGGAAAAATTGAATTTTCTGCTCAGCAAGTCGGATATTCGGAGCTCGGTTACATTAT
TGAGAATGACAATCTTTGCCTTGCCTTACTCGATACAGTACAAAAACAAAAGAATGTCTCTTTTTACAGTCCAGATAGCT
TAAATGATATTGTTTTTGGTGAAGGTGAAGCCTGGTTAACCCTGCACAGTGGTAAAACTCTGACCTCGAAATTGGTTGTA
GGGGCTGACGGTGCAAATTCATGGTTACGGGAAAAATCCACTATTCCTTTAACCTTTTGGGATTACCAGCATCATGCACT
GGTCGCGACGATTAAAACAGAACTGCCGCATGAGCATTGTGCCCGGCAAATTTTCACGCCCGACGGGCCACTCGCTTTTT
TGCCTCTTTTTGAACAGAATTTATGCTCTATTGTTTGGTCAGTATCACCGCAAAAAGCTGAGCAGTTAAAAAATTTAACG
GCTGTCGAGTTTAATAAACAATTATCGCGCAATTTTGATAACCGTTTAGGGCTGTGTGAATTGCAAAGTGAGCGCTTCAG
CTTTCCTCTTCGCATGCGTTATGCGCGAGACTTTGCCAAACACCGAATCGCTTTAATTGGCGATGCTGCACATACTATCC
ATCCTCTAGCGGGGCAGGGGGTTAACCTTGGTTTGTTAGATGCGGTCAGTTTAGGACAAACCATTGAACAAAATATTGCG
GCAGAAAAGGATATTGGTTTATATAAAAACCTCCGTTATTTTGAGCGTTGGAGAAAAACTGAAGCCGCACAAATGATTGC
GTCAATGGAATTGTTAAAGCAATTATTTGAGGGAGACAATCCCCTCCAGAAAGCCCTTCGCGATGTTGCACTGGTTTTTA
CCGACCAAGTCAGTCCACTGAAAAAATCATTTATTAAACAGGCAATGGGCTTAAGTGGAGAATTACCCCTATTGGCAAAA
TAA

Upstream 100 bases:

>100_bases
ATGTTGTCTTACAGGCGATGCGTTATTTACCCGATTTATCAGCTCCTATTATAAAACAGGCGAAAGGGCAGTTTCCATTA
CTCAGCAGAGATACAAACAA

Downstream 100 bases:

>100_bases
AGTCAGTTATACCCAAACTATTTGAAGATGCAGTAATCTGGATCTTCAAGTAATTTGGGTAGATAAATCTAAGGCTTTGA
ATTTGTATTTTCAAGTGTTT

Product: ubiquinone biosynthesis visC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MMQSYDLTIVGGGIVGLTLAASLADSALSIALIETSNRPILPEKPVNRVSAISFASKKIFEKLSVWQQLDSGRITAYDSM
LVWDKDSFGKIEFSAQQVGYSELGYIIENDNLCLALLDTVQKQKNVSFYSPDSLNDIVFGEGEAWLTLHSGKTLTSKLVV
GADGANSWLREKSTIPLTFWDYQHHALVATIKTELPHEHCARQIFTPDGPLAFLPLFEQNLCSIVWSVSPQKAEQLKNLT
AVEFNKQLSRNFDNRLGLCELQSERFSFPLRMRYARDFAKHRIALIGDAAHTIHPLAGQGVNLGLLDAVSLGQTIEQNIA
AEKDIGLYKNLRYFERWRKTEAAQMIASMELLKQLFEGDNPLQKALRDVALVFTDQVSPLKKSFIKQAMGLSGELPLLAK

Sequences:

>Translated_400_residues
MMQSYDLTIVGGGIVGLTLAASLADSALSIALIETSNRPILPEKPVNRVSAISFASKKIFEKLSVWQQLDSGRITAYDSM
LVWDKDSFGKIEFSAQQVGYSELGYIIENDNLCLALLDTVQKQKNVSFYSPDSLNDIVFGEGEAWLTLHSGKTLTSKLVV
GADGANSWLREKSTIPLTFWDYQHHALVATIKTELPHEHCARQIFTPDGPLAFLPLFEQNLCSIVWSVSPQKAEQLKNLT
AVEFNKQLSRNFDNRLGLCELQSERFSFPLRMRYARDFAKHRIALIGDAAHTIHPLAGQGVNLGLLDAVSLGQTIEQNIA
AEKDIGLYKNLRYFERWRKTEAAQMIASMELLKQLFEGDNPLQKALRDVALVFTDQVSPLKKSFIKQAMGLSGELPLLAK
>Mature_400_residues
MMQSYDLTIVGGGIVGLTLAASLADSALSIALIETSNRPILPEKPVNRVSAISFASKKIFEKLSVWQQLDSGRITAYDSM
LVWDKDSFGKIEFSAQQVGYSELGYIIENDNLCLALLDTVQKQKNVSFYSPDSLNDIVFGEGEAWLTLHSGKTLTSKLVV
GADGANSWLREKSTIPLTFWDYQHHALVATIKTELPHEHCARQIFTPDGPLAFLPLFEQNLCSIVWSVSPQKAEQLKNLT
AVEFNKQLSRNFDNRLGLCELQSERFSFPLRMRYARDFAKHRIALIGDAAHTIHPLAGQGVNLGLLDAVSLGQTIEQNIA
AEKDIGLYKNLRYFERWRKTEAAQMIASMELLKQLFEGDNPLQKALRDVALVFTDQVSPLKKSFIKQAMGLSGELPLLAK

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=404, Percent_Identity=30.9405940594059, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI32967307, Length=350, Percent_Identity=31.1428571428571, Blast_Score=145, Evalue=5e-35,
Organism=Escherichia coli, GI1789273, Length=397, Percent_Identity=52.1410579345088, Blast_Score=416, Evalue=1e-117,
Organism=Escherichia coli, GI1786883, Length=391, Percent_Identity=33.2480818414322, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1789274, Length=390, Percent_Identity=29.4871794871795, Blast_Score=180, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI25146631, Length=427, Percent_Identity=32.0843091334895, Blast_Score=188, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6321694, Length=457, Percent_Identity=26.6958424507659, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI19920760, Length=434, Percent_Identity=30.184331797235, Blast_Score=162, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 44578; Mature: 44578

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQSYDLTIVGGGIVGLTLAASLADSALSIALIETSNRPILPEKPVNRVSAISFASKKIF
CCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
EKLSVWQQLDSGRITAYDSMLVWDKDSFGKIEFSAQQVGYSELGYIIENDNLCLALLDTV
HHHHHHHHHCCCCEEEECCEEEECCCCCCEEEEHHHHCCHHHCCEEEECCCEEEHHHHHH
QKQKNVSFYSPDSLNDIVFGEGEAWLTLHSGKTLTSKLVVGADGANSWLREKSTIPLTFW
HHHCCCCEECCCCCCCEEEECCCEEEEEECCCCEEEEEEEECCCCHHHHHCCCCCCEEEE
DYQHHALVATIKTELPHEHCARQIFTPDGPLAFLPLFEQNLCSIVWSVSPQKAEQLKNLT
CCCCCEEEEEEEHHCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCH
AVEFNKQLSRNFDNRLGLCELQSERFSFPLRMRYARDFAKHRIALIGDAAHTIHPLAGQG
HHHHHHHHHCCHHCCCCEEEECHHHCCCCHHHHHHHHHHHCEEEEEECCHHHHCCCCCCC
VNLGLLDAVSLGQTIEQNIAAEKDIGLYKNLRYFERWRKTEAAQMIASMELLKQLFEGDN
CCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLQKALRDVALVFTDQVSPLKKSFIKQAMGLSGELPLLAK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMQSYDLTIVGGGIVGLTLAASLADSALSIALIETSNRPILPEKPVNRVSAISFASKKIF
CCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
EKLSVWQQLDSGRITAYDSMLVWDKDSFGKIEFSAQQVGYSELGYIIENDNLCLALLDTV
HHHHHHHHHCCCCEEEECCEEEECCCCCCEEEEHHHHCCHHHCCEEEECCCEEEHHHHHH
QKQKNVSFYSPDSLNDIVFGEGEAWLTLHSGKTLTSKLVVGADGANSWLREKSTIPLTFW
HHHCCCCEECCCCCCCEEEECCCEEEEEECCCCEEEEEEEECCCCHHHHHCCCCCCEEEE
DYQHHALVATIKTELPHEHCARQIFTPDGPLAFLPLFEQNLCSIVWSVSPQKAEQLKNLT
CCCCCEEEEEEEHHCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHCCH
AVEFNKQLSRNFDNRLGLCELQSERFSFPLRMRYARDFAKHRIALIGDAAHTIHPLAGQG
HHHHHHHHHCCHHCCCCEEEECHHHCCCCHHHHHHHHHHHCEEEEEECCHHHHCCCCCCC
VNLGLLDAVSLGQTIEQNIAAEKDIGLYKNLRYFERWRKTEAAQMIASMELLKQLFEGDN
CCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLQKALRDVALVFTDQVSPLKKSFIKQAMGLSGELPLLAK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]