| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is pntA [H]
Identifier: 119944339
GI number: 119944339
Start: 734448
End: 735992
Strand: Reverse
Name: pntA [H]
Synonym: Ping_0566
Alternate gene names: 119944339
Gene position: 735992-734448 (Counterclockwise)
Preceding gene: 119944340
Following gene: 119944338
Centisome position: 16.14
GC content: 45.5
Gene sequence:
>1545_bases ATGCAGATAGGTATACCTAGAGAGATCCAAGAGAATGAAAACCGCGTGGCAGCAACACCAAATACTGTTGAGCTGCTCAT TAAACAGGGTTTTACTTTTCTTGTGGAAAAAAACGCCGGAATAGCTGCCAGCTTTTCTGATCAAGCCTACCAGAATTCTG GTGCCGAAATTGGCACTGATAAAAATCTGGTATGGCAATCAGATATTATTTTCAAAGTGAATGCGCCTACCGATACTGAG ATTACCTTAATGAAGGAAGGGGCGACCCTAGTCAGTTTCATCTGGCCAGCACAAAACCCTGAATTACTTGAAAAATTAAC CAGTAAAAAAATCAGTGTTATTGCAATGGATTCAGTACCACGTACTTCCCGGGCACAAGCACTTGATGCACTGAGCTCAA TGGCCAATATCGCAGGTTACCGTGCCGTTATTGAAGCCGCTAATCAGTTTGGCCGTTTCTTCACCGGACAGATCACGGCA GCAGGTAAAGTACCACCCGCCAAGGTACTGATTATAGGCGCGGGTGTTGCAGGTCTTTCTGCATTAGGCACCGCCGGCAG TTTAGGCGCAATTGTACGCGCATTTGATACTCGCCCTGAAGTAAAAGAGCAAGTTGAGAGTATGGGTGCTGAATTCTTAG TCGTTGAATACGAAGAAGAAAACGAGGTCAGCAGCTCGGGTTATGCTAAGACTATGAGCGAGGGTTATCAAAAAGCGCAA GCTGCAATGATGGCTGAGCAAGCTAAAGATGTTGACATCATTATTACAACGGCACTTATTCCAGGTAAACCGGCTCCGCT TCTTGTGACCAAAGAAATGATAGCATCGATGAAAGCGGGTAGTGTGATCGTTGATTTAGCAGCGCAAGCAGGCGGTAACG CGGCACTCACGGTTAAAGATGAAGTTTTCTTAACCGATAACGGTGTAAAAATCGTTGGCTATACGGATCTTCCCAGCCGT TTACCGACGCAATCAAGCCAGCTTTATTCAACCAATTTAGTTAACTTGATGAAGCTGCTTTGTAAAGATAAAGACGGCAT TATCAATATTGACTTCAACGATGAAGTTATCCGCGGTGCAACCGTTGTCAAAGAAGGTGAAATTTCCTGGCCACCACCGG CAATCAATGTCAGTGCTGCACCTGCGCCTAAAGCAGAAGCTGCAAAATCGGCTACCGTTGTTGAGAAAAAACCAGAAAAT AAATGGATTAAACCCGCTGCAGCTGTTGTTGCTGCCATCCTATTTGGATGGCTTGCAAGCGTCGCACCGGCAAACTTTCT CGCTCATTTTACCGTCTTTATACTGGCCTGTATTGTGGGTTACGGCGTGGTTTGGAATGTTGCCCATTCTCTGCATACAC CACTAATGAGTGTAACCAACGCAATCAGCGGCATTATCATCATCGGAGCGCTGCTGCAGGTAGGTCAAGGTAACGGTTTT GTGACTACCCTGTCGACCATTGCAATACTGATCGCCACTATCAATATCGTGGGTGGCTTTACCGTTACTCAGCGTATGTT GAAAATGTTCCAAAAGGATAAATAA
Upstream 100 bases:
>100_bases GCCTGTACAAATAAAAGCTGAATATGATCCAGATCTATTTATGCCTTTTTTTTGTACGTAAAATCAACAATTCATAATAA CAAGCGATCATGGACTTACT
Downstream 100 bases:
>100_bases GCATGTCTCAAGGATTAATTACAGCTGCATACATGATTGCAGCCATCCTCTTTATTGCCAGCCTTAACGGCTTAAGCAGT CAAGAAAGTGCCAAGCGTGG
Product: NAD(P) transhydrogenase subunit alpha
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MQIGIPREIQENENRVAATPNTVELLIKQGFTFLVEKNAGIAASFSDQAYQNSGAEIGTDKNLVWQSDIIFKVNAPTDTE ITLMKEGATLVSFIWPAQNPELLEKLTSKKISVIAMDSVPRTSRAQALDALSSMANIAGYRAVIEAANQFGRFFTGQITA AGKVPPAKVLIIGAGVAGLSALGTAGSLGAIVRAFDTRPEVKEQVESMGAEFLVVEYEEENEVSSSGYAKTMSEGYQKAQ AAMMAEQAKDVDIIITTALIPGKPAPLLVTKEMIASMKAGSVIVDLAAQAGGNAALTVKDEVFLTDNGVKIVGYTDLPSR LPTQSSQLYSTNLVNLMKLLCKDKDGIINIDFNDEVIRGATVVKEGEISWPPPAINVSAAPAPKAEAAKSATVVEKKPEN KWIKPAAAVVAAILFGWLASVAPANFLAHFTVFILACIVGYGVVWNVAHSLHTPLMSVTNAISGIIIIGALLQVGQGNGF VTTLSTIAILIATINIVGGFTVTQRMLKMFQKDK
Sequences:
>Translated_514_residues MQIGIPREIQENENRVAATPNTVELLIKQGFTFLVEKNAGIAASFSDQAYQNSGAEIGTDKNLVWQSDIIFKVNAPTDTE ITLMKEGATLVSFIWPAQNPELLEKLTSKKISVIAMDSVPRTSRAQALDALSSMANIAGYRAVIEAANQFGRFFTGQITA AGKVPPAKVLIIGAGVAGLSALGTAGSLGAIVRAFDTRPEVKEQVESMGAEFLVVEYEEENEVSSSGYAKTMSEGYQKAQ AAMMAEQAKDVDIIITTALIPGKPAPLLVTKEMIASMKAGSVIVDLAAQAGGNAALTVKDEVFLTDNGVKIVGYTDLPSR LPTQSSQLYSTNLVNLMKLLCKDKDGIINIDFNDEVIRGATVVKEGEISWPPPAINVSAAPAPKAEAAKSATVVEKKPEN KWIKPAAAVVAAILFGWLASVAPANFLAHFTVFILACIVGYGVVWNVAHSLHTPLMSVTNAISGIIIIGALLQVGQGNGF VTTLSTIAILIATINIVGGFTVTQRMLKMFQKDK >Mature_514_residues MQIGIPREIQENENRVAATPNTVELLIKQGFTFLVEKNAGIAASFSDQAYQNSGAEIGTDKNLVWQSDIIFKVNAPTDTE ITLMKEGATLVSFIWPAQNPELLEKLTSKKISVIAMDSVPRTSRAQALDALSSMANIAGYRAVIEAANQFGRFFTGQITA AGKVPPAKVLIIGAGVAGLSALGTAGSLGAIVRAFDTRPEVKEQVESMGAEFLVVEYEEENEVSSSGYAKTMSEGYQKAQ AAMMAEQAKDVDIIITTALIPGKPAPLLVTKEMIASMKAGSVIVDLAAQAGGNAALTVKDEVFLTDNGVKIVGYTDLPSR LPTQSSQLYSTNLVNLMKLLCKDKDGIINIDFNDEVIRGATVVKEGEISWPPPAINVSAAPAPKAEAAKSATVVEKKPEN KWIKPAAAVVAAILFGWLASVAPANFLAHFTVFILACIVGYGVVWNVAHSLHTPLMSVTNAISGIIIIGALLQVGQGNGF VTTLSTIAILIATINIVGGFTVTQRMLKMFQKDK
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=539, Percent_Identity=50.0927643784787, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI122939153, Length=539, Percent_Identity=50.0927643784787, Blast_Score=469, Evalue=1e-132, Organism=Escherichia coli, GI1787887, Length=513, Percent_Identity=69.0058479532164, Blast_Score=709, Evalue=0.0, Organism=Caenorhabditis elegans, GI17550456, Length=520, Percent_Identity=52.5, Blast_Score=496, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 54524; Mature: 54524
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS00836 ALADH_PNT_1 ; PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIGIPREIQENENRVAATPNTVELLIKQGFTFLVEKNAGIAASFSDQAYQNSGAEIGTD CCCCCCCHHHCCCCEEEECCHHHHHHHHCCCEEEEECCCCEEECCCCHHHHCCCCCCCCC KNLVWQSDIIFKVNAPTDTEITLMKEGATLVSFIWPAQNPELLEKLTSKKISVIAMDSVP CCEEEECCEEEEECCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCC RTSRAQALDALSSMANIAGYRAVIEAANQFGRFFTGQITAAGKVPPAKVLIIGAGVAGLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECEEEECCCCCCCEEEEEECCHHHHH ALGTAGSLGAIVRAFDTRPEVKEQVESMGAEFLVVEYEEENEVSSSGYAKTMSEGYQKAQ HHCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH AAMMAEQAKDVDIIITTALIPGKPAPLLVTKEMIASMKAGSVIVDLAAQAGGNAALTVKD HHHHHHHCCCCEEEEEEEECCCCCCCEEEEHHHHHHHCCCCEEEEEHHCCCCCEEEEEEC EVFLTDNGVKIVGYTDLPSRLPTQSSQLYSTNLVNLMKLLCKDKDGIINIDFNDEVIRGA EEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCC TVVKEGEISWPPPAINVSAAPAPKAEAAKSATVVEKKPENKWIKPAAAVVAAILFGWLAS EEEECCCCCCCCCCCCCCCCCCCCHHHHCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHH VAPANFLAHFTVFILACIVGYGVVWNVAHSLHTPLMSVTNAISGIIIIGALLQVGQGNGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VTTLSTIAILIATINIVGGFTVTQRMLKMFQKDK EHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure MQIGIPREIQENENRVAATPNTVELLIKQGFTFLVEKNAGIAASFSDQAYQNSGAEIGTD CCCCCCCHHHCCCCEEEECCHHHHHHHHCCCEEEEECCCCEEECCCCHHHHCCCCCCCCC KNLVWQSDIIFKVNAPTDTEITLMKEGATLVSFIWPAQNPELLEKLTSKKISVIAMDSVP CCEEEECCEEEEECCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCC RTSRAQALDALSSMANIAGYRAVIEAANQFGRFFTGQITAAGKVPPAKVLIIGAGVAGLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECEEEECCCCCCCEEEEEECCHHHHH ALGTAGSLGAIVRAFDTRPEVKEQVESMGAEFLVVEYEEENEVSSSGYAKTMSEGYQKAQ HHCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH AAMMAEQAKDVDIIITTALIPGKPAPLLVTKEMIASMKAGSVIVDLAAQAGGNAALTVKD HHHHHHHCCCCEEEEEEEECCCCCCCEEEEHHHHHHHCCCCEEEEEHHCCCCCEEEEEEC EVFLTDNGVKIVGYTDLPSRLPTQSSQLYSTNLVNLMKLLCKDKDGIINIDFNDEVIRGA EEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCC TVVKEGEISWPPPAINVSAAPAPKAEAAKSATVVEKKPENKWIKPAAAVVAAILFGWLAS EEEECCCCCCCCCCCCCCCCCCCCHHHHCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHH VAPANFLAHFTVFILACIVGYGVVWNVAHSLHTPLMSVTNAISGIIIIGALLQVGQGNGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE VTTLSTIAILIATINIVGGFTVTQRMLKMFQKDK EHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3525165; 1633824; 9097039; 9278503; 1932078 [H]