| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944288
Identifier: 119944288
GI number: 119944288
Start: 654765
End: 655757
Strand: Reverse
Name: 119944288
Synonym: Ping_0514
Alternate gene names: NA
Gene position: 655757-654765 (Counterclockwise)
Preceding gene: 119944290
Following gene: 119944285
Centisome position: 14.38
GC content: 52.77
Gene sequence:
>993_bases ATGTTTGGATTTACGCTTATTCTTAACCTGATTGCCTCTCTGATGCATGGCTATCTCACCTGGCGTATTGCATCTCTCAA CTGCTTCAAGCCAGTTCATCTCCGTCGCAGGCTATGGCTGCTTTCCCTGACACTGTGGCTGTTATACCTGGTCGGCATAC ACGCTGGTGATGATGTCAGCGGAAGTCTGCTGAGCCTGCTAAATCAGCTTGCCCTGAACTGGCTGGGAGCGCTGTTTCTT GCTACCACTATCCAGCTTATGCTCGAACTACTGAGCGGCTTTGGTTTTTGGGCAAAACCCTATCTTAATCAGCTTCGCAG CAGTGCCCTTTTGCTCTCGTTGCTATTGATTGTCGTGGCACTGGTGCAGGGTATGCGTGCGCCGATCGTTAGCCGGCACG AGGTTACCCTGACTGCACTGCCCGTATCGCTCGACGGCACTCGTATTGTGGTGCTATCAGATCTGCATCTCGGCAGTCAG TTGGGAGCGCAATGGCTTAATGCGCGGGTTGCTCAGGTTGAAGGACTCAAACCAGATCTGATCGTTCTGTTGGGTGATAT CTTTGAGGGACATGGCAGAATAGATAGCGGCCTGCAAGCTGTCTTTGCGCGCCTGAAAGCGCCGATGGGAGTCTATGCCG TCACCGGTAATCACGAGTTCCACGGTGACAGTACGGCAGCCATCGCCATCAGCGAGAAGGCCAGCGTAGTATGGCTGCGC AACTGCTGGCAGGAGGTCGCCCCCGGATTACTGCTTGCAGGCGTAGATAATCTATCCAGACAGCAGCTCAATAATAATAA CGGGGATCGGGTATTGTCGTTACTCGATGGGAATTATAAGGGCGCTATAGTACTACTTTCGCACTCACCGTTGCAGGTGA AAAAGGCCAAAAATAGGGGTGTCGGGCTGATGTTGTCAGGCCACACTCACGGAGGCCAAATCTGGCCCTTCGGCCTTCTG GTCAAACAATACTATCCCTACTTCGATGGGTGA
Upstream 100 bases:
>100_bases AAGAAAAAGTAGCGTTTAATTCCTGCGCCAACTTACATAACCTGCACCGTTGGGCTGTTGATTCTAGGGATCAAATGCCC AACGGCCTAGAGGAAAAGCT
Downstream 100 bases:
>100_bases TATCAGATCGGCAAGATGAGCCTGATCGTTAGTTGCGGCACCGGCCTGTGCGACCTCACATGCGGCTGTGGCAGCCGGGT GAAATTATTGAAGTGACACT
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MFGFTLILNLIASLMHGYLTWRIASLNCFKPVHLRRRLWLLSLTLWLLYLVGIHAGDDVSGSLLSLLNQLALNWLGALFL ATTIQLMLELLSGFGFWAKPYLNQLRSSALLLSLLLIVVALVQGMRAPIVSRHEVTLTALPVSLDGTRIVVLSDLHLGSQ LGAQWLNARVAQVEGLKPDLIVLLGDIFEGHGRIDSGLQAVFARLKAPMGVYAVTGNHEFHGDSTAAIAISEKASVVWLR NCWQEVAPGLLLAGVDNLSRQQLNNNNGDRVLSLLDGNYKGAIVLLSHSPLQVKKAKNRGVGLMLSGHTHGGQIWPFGLL VKQYYPYFDG
Sequences:
>Translated_330_residues MFGFTLILNLIASLMHGYLTWRIASLNCFKPVHLRRRLWLLSLTLWLLYLVGIHAGDDVSGSLLSLLNQLALNWLGALFL ATTIQLMLELLSGFGFWAKPYLNQLRSSALLLSLLLIVVALVQGMRAPIVSRHEVTLTALPVSLDGTRIVVLSDLHLGSQ LGAQWLNARVAQVEGLKPDLIVLLGDIFEGHGRIDSGLQAVFARLKAPMGVYAVTGNHEFHGDSTAAIAISEKASVVWLR NCWQEVAPGLLLAGVDNLSRQQLNNNNGDRVLSLLDGNYKGAIVLLSHSPLQVKKAKNRGVGLMLSGHTHGGQIWPFGLL VKQYYPYFDG >Mature_330_residues MFGFTLILNLIASLMHGYLTWRIASLNCFKPVHLRRRLWLLSLTLWLLYLVGIHAGDDVSGSLLSLLNQLALNWLGALFL ATTIQLMLELLSGFGFWAKPYLNQLRSSALLLSLLLIVVALVQGMRAPIVSRHEVTLTALPVSLDGTRIVVLSDLHLGSQ LGAQWLNARVAQVEGLKPDLIVLLGDIFEGHGRIDSGLQAVFARLKAPMGVYAVTGNHEFHGDSTAAIAISEKASVVWLR NCWQEVAPGLLLAGVDNLSRQQLNNNNGDRVLSLLDGNYKGAIVLLSHSPLQVKKAKNRGVGLMLSGHTHGGQIWPFGLL VKQYYPYFDG
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031196, Length=242, Percent_Identity=30.1652892561983, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI210031210, Length=245, Percent_Identity=30.2040816326531, Blast_Score=101, Evalue=8e-22, Organism=Caenorhabditis elegans, GI115535030, Length=248, Percent_Identity=31.4516129032258, Blast_Score=104, Evalue=7e-23, Organism=Caenorhabditis elegans, GI115535028, Length=248, Percent_Identity=31.4516129032258, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI71996034, Length=250, Percent_Identity=27.6, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 36152; Mature: 36152
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGFTLILNLIASLMHGYLTWRIASLNCFKPVHLRRRLWLLSLTLWLLYLVGIHAGDDVS CHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GSLLSLLNQLALNWLGALFLATTIQLMLELLSGFGFWAKPYLNQLRSSALLLSLLLIVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVQGMRAPIVSRHEVTLTALPVSLDGTRIVVLSDLHLGSQLGAQWLNARVAQVEGLKPDL HHCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC IVLLGDIFEGHGRIDSGLQAVFARLKAPMGVYAVTGNHEFHGDSTAAIAISEKASVVWLR EEHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEECCCCEEEEEEECCCCCHHHH NCWQEVAPGLLLAGVDNLSRQQLNNNNGDRVLSLLDGNYKGAIVLLSHSPLQVKKAKNRG HHHHHHCCCEEEECCCHHHHHHHCCCCCHHEEEEECCCCCCEEEEEECCCCHHHHHCCCC VGLMLSGHTHGGQIWPFGLLVKQYYPYFDG EEEEEECCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MFGFTLILNLIASLMHGYLTWRIASLNCFKPVHLRRRLWLLSLTLWLLYLVGIHAGDDVS CHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GSLLSLLNQLALNWLGALFLATTIQLMLELLSGFGFWAKPYLNQLRSSALLLSLLLIVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVQGMRAPIVSRHEVTLTALPVSLDGTRIVVLSDLHLGSQLGAQWLNARVAQVEGLKPDL HHCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC IVLLGDIFEGHGRIDSGLQAVFARLKAPMGVYAVTGNHEFHGDSTAAIAISEKASVVWLR EEHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEECCCCEEEEEEECCCCCHHHH NCWQEVAPGLLLAGVDNLSRQQLNNNNGDRVLSLLDGNYKGAIVLLSHSPLQVKKAKNRG HHHHHHCCCEEEECCCHHHHHHHCCCCCHHEEEEECCCCCCEEEEEECCCCHHHHHCCCC VGLMLSGHTHGGQIWPFGLLVKQYYPYFDG EEEEEECCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]