| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is ptsP [H]
Identifier: 119944277
GI number: 119944277
Start: 637456
End: 639738
Strand: Direct
Name: ptsP [H]
Synonym: Ping_0503
Alternate gene names: 119944277
Gene position: 637456-639738 (Clockwise)
Preceding gene: 119944276
Following gene: 119944279
Centisome position: 13.98
GC content: 39.99
Gene sequence:
>2283_bases ATGTTAAGTCAATTGCGGAATATAGTAGAGCAGGTCGGCAATGCAAAAAATTTAACTGAGGCCATGGACATTCTGGTGCG CCAAACCAAATTAGCCATGGAAGTCGACTGCTGCTCTATTTATATTACCGATCAAAGTACTTCTCAACTTAATTTAATAG CCAGTGAAGGCCTTGCAAGCCAAGTTGTTGGTTTTTCCTATCTCAAATTTGGCGAAGGTATTATAGGCTTAATTCACCAG AAGGGAGAGCCTTTAAACATTGCCAACATCACCGAACACCCCAATTACAAATATCTGCCGAGCAGTGGAGAGGAGTCTTT TAATTCATTATTAGGCACCCCGATTATCCATCGTCGAAAAGCATTAGGGGTGTTGGTTGTACAGCAAAAAGAACCCCGTT TATTCAGCGAATTAGAAGAATCTTTTTTACTTACCCTCGCAATGCATTTAGCCAGTGTACTTGACCAGCCGTTTAGTTTA GATGTTGAACGATTAAACCAGCCAAGGGCATCAATTTATCTGCAGGGCTCTCCTGCAAGTCCGGGCATTGCAATTGCAGA TGCGTATGTTGTACGTTCTATTATGACATTAGCGGAAGTTATCATAGGAAAAAGTCACTCGGTCGTTAAAGAGCTCCTGC TGTTTGAGATAATAGTCAAAAAATGCATCGACGAATTTTCTAATCTGGCATTAACACTTAAAGAACAAGTGTCAAAAGAT GCCTTCATTCTGTTTGATATTTACTCGCATATTCTAAAGGATAAAACATTTTTAAATGCCATTAGATCACAAATCAATGA ATCTCATTTAAATGCCCCCAGTGCAGTTAAAGTTGTCGCAGAGTCTTATATCAAACAATTTGAGGCAATGAGTGATCCCT ATTTAAGTCAACGCTCTTCAGATATTCGCGATGTTGCCCAACGTTTGTTATACCATCTTACGCATCAGGTTGAAGATGAT TTAAAGTTACCCGATAAGCTTATTCTAGTGGCTAATGAAGTGACTTTATCTATGGTTGCGAGTATCCCAAATGACAAGTT ACAGGGCATTGTCTCGGTTCACGGTGGCATTGGTTCTCACGTGGCGATTTTAGCGCGAACACTCGGTATTCCGGCGGTAA TGGGGGTGCAATTTTCCTTAGATAATATTAATCAAAAAAGTTTAATTATCGATGGTTATGAAGGTGGCGTGATTCTGCTG CCTGAGCAATCATTAGTGAGTCATTATCAATCTGTGCTAGATGAAGAAAATGAATTAAAAAAGCTGGTTGAATCTGATCC GCATGAAAAAGCCGTTACCCTTGATGGTCATGCTATTTCGATACTGCTCAACACAGGTTTAAATGCCAAGCAGCACGGGA CAATATTAGGGCATTTTGATGGCATAGGTTTATACCGCAGTGAATTACCTTTTATATTGACGGACTCTTTTCCTACCGAA CAGGAACAGGTGCAAGTCTACCAACGACTACTTGATCAATATCCCAAGTTACCGGTGACCATGCGCACCTTGGATATTGG TGGTGATAAATCCCTGAGTTATTTTCCGATAGTTGAAGATAACCCTTTTCTTGGCTGGCGTGGAATTCGTTTAACCTTGG ATCATCCTGAAATATTTTTGGTTCAGATTAGAGCGATGTTAAGAGCCAGTGTAAAGCATCAAAATTTACGTATTATGCTG CCAATGGTCACTTCAATTGAAGAAGTGGACGAAGCCCATAAATTGATTACCCAAGCATGGAATGAAATTAAGTTTGAGCT TAATTATTCCTCCGAAGCATTCCCTATGCCTGCGATAGGTGCAATGGTTGAGGTACCTGCTGCTGTTTTCCTTATTCCTG CACTTGCCAAAAAAGTAGACTTTGTTTCAGTTGGCAGCAATGACCTTATCCAATATTTATTAGCGGTGGATAGAAATAAT AGTCGTGTGGCGTCGCTTTACGATAGTTATCATCCTGCCGTGCTGCAAGCGCTAAAAATGATTATAGATAACAGTAAGCG TTTTGATTTGGAAGTGAGTATCTGCGGCGAGCTTGCCAGTGATCCTATTGGTGCTTTAATTTTGATCGGTCTGGGCTATA CCAAATTGAGCATGAACTCCTATAATATGGGCCGAATCAAGTATTTAATTAATGCGCTTCCCCGTTATGAATTAGAGTCT TGTGTAGAGCAGGCTTTAAAGGCAAACAAGGGTACAGATATTCGCGCTATTTTTGTTGATTACCTTAATATAAAAGAATT AGGCGGGTTTATTCGTGCAGGTAATAGCAAAAAAAATAATTAA
Upstream 100 bases:
>100_bases TAATGAAAAAAAGTTCAGACAAGAAAAGGAATAAACGGCCTCGTCGGGCATCTTTTTATAAAAAAAGATAACAGAGCTTT TTCTAAGAAAGGCGTTTTGT
Downstream 100 bases:
>100_bases GCGATTACATTATAAAATAGGCACAACCCCTTTAACTGTTAGTTTAAAGGAGTATTTTTACCTTTTAATTTAGATCACCC TTTTTTTAGTCTAAATAATC
Product: phosphoenolpyruvate-protein phosphotransferase PtsP
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 760; Mature: 760
Protein sequence:
>760_residues MLSQLRNIVEQVGNAKNLTEAMDILVRQTKLAMEVDCCSIYITDQSTSQLNLIASEGLASQVVGFSYLKFGEGIIGLIHQ KGEPLNIANITEHPNYKYLPSSGEESFNSLLGTPIIHRRKALGVLVVQQKEPRLFSELEESFLLTLAMHLASVLDQPFSL DVERLNQPRASIYLQGSPASPGIAIADAYVVRSIMTLAEVIIGKSHSVVKELLLFEIIVKKCIDEFSNLALTLKEQVSKD AFILFDIYSHILKDKTFLNAIRSQINESHLNAPSAVKVVAESYIKQFEAMSDPYLSQRSSDIRDVAQRLLYHLTHQVEDD LKLPDKLILVANEVTLSMVASIPNDKLQGIVSVHGGIGSHVAILARTLGIPAVMGVQFSLDNINQKSLIIDGYEGGVILL PEQSLVSHYQSVLDEENELKKLVESDPHEKAVTLDGHAISILLNTGLNAKQHGTILGHFDGIGLYRSELPFILTDSFPTE QEQVQVYQRLLDQYPKLPVTMRTLDIGGDKSLSYFPIVEDNPFLGWRGIRLTLDHPEIFLVQIRAMLRASVKHQNLRIML PMVTSIEEVDEAHKLITQAWNEIKFELNYSSEAFPMPAIGAMVEVPAAVFLIPALAKKVDFVSVGSNDLIQYLLAVDRNN SRVASLYDSYHPAVLQALKMIIDNSKRFDLEVSICGELASDPIGALILIGLGYTKLSMNSYNMGRIKYLINALPRYELES CVEQALKANKGTDIRAIFVDYLNIKELGGFIRAGNSKKNN
Sequences:
>Translated_760_residues MLSQLRNIVEQVGNAKNLTEAMDILVRQTKLAMEVDCCSIYITDQSTSQLNLIASEGLASQVVGFSYLKFGEGIIGLIHQ KGEPLNIANITEHPNYKYLPSSGEESFNSLLGTPIIHRRKALGVLVVQQKEPRLFSELEESFLLTLAMHLASVLDQPFSL DVERLNQPRASIYLQGSPASPGIAIADAYVVRSIMTLAEVIIGKSHSVVKELLLFEIIVKKCIDEFSNLALTLKEQVSKD AFILFDIYSHILKDKTFLNAIRSQINESHLNAPSAVKVVAESYIKQFEAMSDPYLSQRSSDIRDVAQRLLYHLTHQVEDD LKLPDKLILVANEVTLSMVASIPNDKLQGIVSVHGGIGSHVAILARTLGIPAVMGVQFSLDNINQKSLIIDGYEGGVILL PEQSLVSHYQSVLDEENELKKLVESDPHEKAVTLDGHAISILLNTGLNAKQHGTILGHFDGIGLYRSELPFILTDSFPTE QEQVQVYQRLLDQYPKLPVTMRTLDIGGDKSLSYFPIVEDNPFLGWRGIRLTLDHPEIFLVQIRAMLRASVKHQNLRIML PMVTSIEEVDEAHKLITQAWNEIKFELNYSSEAFPMPAIGAMVEVPAAVFLIPALAKKVDFVSVGSNDLIQYLLAVDRNN SRVASLYDSYHPAVLQALKMIIDNSKRFDLEVSICGELASDPIGALILIGLGYTKLSMNSYNMGRIKYLINALPRYELES CVEQALKANKGTDIRAIFVDYLNIKELGGFIRAGNSKKNN >Mature_760_residues MLSQLRNIVEQVGNAKNLTEAMDILVRQTKLAMEVDCCSIYITDQSTSQLNLIASEGLASQVVGFSYLKFGEGIIGLIHQ KGEPLNIANITEHPNYKYLPSSGEESFNSLLGTPIIHRRKALGVLVVQQKEPRLFSELEESFLLTLAMHLASVLDQPFSL DVERLNQPRASIYLQGSPASPGIAIADAYVVRSIMTLAEVIIGKSHSVVKELLLFEIIVKKCIDEFSNLALTLKEQVSKD AFILFDIYSHILKDKTFLNAIRSQINESHLNAPSAVKVVAESYIKQFEAMSDPYLSQRSSDIRDVAQRLLYHLTHQVEDD LKLPDKLILVANEVTLSMVASIPNDKLQGIVSVHGGIGSHVAILARTLGIPAVMGVQFSLDNINQKSLIIDGYEGGVILL PEQSLVSHYQSVLDEENELKKLVESDPHEKAVTLDGHAISILLNTGLNAKQHGTILGHFDGIGLYRSELPFILTDSFPTE QEQVQVYQRLLDQYPKLPVTMRTLDIGGDKSLSYFPIVEDNPFLGWRGIRLTLDHPEIFLVQIRAMLRASVKHQNLRIML PMVTSIEEVDEAHKLITQAWNEIKFELNYSSEAFPMPAIGAMVEVPAAVFLIPALAKKVDFVSVGSNDLIQYLLAVDRNN SRVASLYDSYHPAVLQALKMIIDNSKRFDLEVSICGELASDPIGALILIGLGYTKLSMNSYNMGRIKYLINALPRYELES CVEQALKANKGTDIRAIFVDYLNIKELGGFIRAGNSKKNN
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=754, Percent_Identity=43.1034482758621, Blast_Score=642, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=572, Percent_Identity=35.1398601398601, Blast_Score=298, Evalue=8e-82, Organism=Escherichia coli, GI48994992, Length=478, Percent_Identity=31.3807531380753, Blast_Score=242, Evalue=8e-65, Organism=Escherichia coli, GI1788726, Length=529, Percent_Identity=32.3251417769376, Blast_Score=236, Evalue=4e-63, Organism=Escherichia coli, GI1787994, Length=407, Percent_Identity=26.2899262899263, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 84403; Mature: 84403
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSQLRNIVEQVGNAKNLTEAMDILVRQTKLAMEVDCCSIYITDQSTSQLNLIASEGLAS CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCEEEEHHCCHHH QVVGFSYLKFGEGIIGLIHQKGEPLNIANITEHPNYKYLPSSGEESFNSLLGTPIIHRRK HHHHHHHHHHCCCHHHHEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH ALGVLVVQQKEPRLFSELEESFLLTLAMHLASVLDQPFSLDVERLNQPRASIYLQGSPAS HCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEECCCCC PGIAIADAYVVRSIMTLAEVIIGKSHSVVKELLLFEIIVKKCIDEFSNLALTLKEQVSKD CCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCC AFILFDIYSHILKDKTFLNAIRSQINESHLNAPSAVKVVAESYIKQFEAMSDPYLSQRSS CEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCC DIRDVAQRLLYHLTHQVEDDLKLPDKLILVANEVTLSMVASIPNDKLQGIVSVHGGIGSH HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCHHHCEEEEECCCCCHH VAILARTLGIPAVMGVQFSLDNINQKSLIIDGYEGGVILLPEQSLVSHYQSVLDEENELK HHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHCCHHHHH KLVESDPHEKAVTLDGHAISILLNTGLNAKQHGTILGHFDGIGLYRSELPFILTDSFPTE HHHHCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEECCCCCCHHHCCCEEEECCCCCH QEQVQVYQRLLDQYPKLPVTMRTLDIGGDKSLSYFPIVEDNPFLGWRGIRLTLDHPEIFL HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHH VQIRAMLRASVKHQNLRIMLPMVTSIEEVDEAHKLITQAWNEIKFELNYSSEAFPMPAIG HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHH AMVEVPAAVFLIPALAKKVDFVSVGSNDLIQYLLAVDRNNSRVASLYDSYHPAVLQALKM HHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHH IIDNSKRFDLEVSICGELASDPIGALILIGLGYTKLSMNSYNMGRIKYLINALPRYELES HHCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHCCCHHHHH CVEQALKANKGTDIRAIFVDYLNIKELGGFIRAGNSKKNN HHHHHHHCCCCCCEEEEEEHHHHHHHHCHHHCCCCCCCCC >Mature Secondary Structure MLSQLRNIVEQVGNAKNLTEAMDILVRQTKLAMEVDCCSIYITDQSTSQLNLIASEGLAS CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCEEEEHHCCHHH QVVGFSYLKFGEGIIGLIHQKGEPLNIANITEHPNYKYLPSSGEESFNSLLGTPIIHRRK HHHHHHHHHHCCCHHHHEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH ALGVLVVQQKEPRLFSELEESFLLTLAMHLASVLDQPFSLDVERLNQPRASIYLQGSPAS HCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEECCCCC PGIAIADAYVVRSIMTLAEVIIGKSHSVVKELLLFEIIVKKCIDEFSNLALTLKEQVSKD CCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCC AFILFDIYSHILKDKTFLNAIRSQINESHLNAPSAVKVVAESYIKQFEAMSDPYLSQRSS CEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCC DIRDVAQRLLYHLTHQVEDDLKLPDKLILVANEVTLSMVASIPNDKLQGIVSVHGGIGSH HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCCCHHHCEEEEECCCCCHH VAILARTLGIPAVMGVQFSLDNINQKSLIIDGYEGGVILLPEQSLVSHYQSVLDEENELK HHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCEEEECCHHHHHHHHHHHCCHHHHH KLVESDPHEKAVTLDGHAISILLNTGLNAKQHGTILGHFDGIGLYRSELPFILTDSFPTE HHHHCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEECCCCCCHHHCCCEEEECCCCCH QEQVQVYQRLLDQYPKLPVTMRTLDIGGDKSLSYFPIVEDNPFLGWRGIRLTLDHPEIFL HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHH VQIRAMLRASVKHQNLRIMLPMVTSIEEVDEAHKLITQAWNEIKFELNYSSEAFPMPAIG HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHH AMVEVPAAVFLIPALAKKVDFVSVGSNDLIQYLLAVDRNNSRVASLYDSYHPAVLQALKM HHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHH IIDNSKRFDLEVSICGELASDPIGALILIGLGYTKLSMNSYNMGRIKYLINALPRYELES HHCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHCCCHHHHH CVEQALKANKGTDIRAIFVDYLNIKELGGFIRAGNSKKNN HHHHHHHCCCCCCEEEEEEHHHHHHHHCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]