| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944189
Identifier: 119944189
GI number: 119944189
Start: 518486
End: 519268
Strand: Reverse
Name: 119944189
Synonym: Ping_0409
Alternate gene names: NA
Gene position: 519268-518486 (Counterclockwise)
Preceding gene: 119944192
Following gene: 119944188
Centisome position: 11.39
GC content: 33.97
Gene sequence:
>783_bases ATGATCGATTGGTATTACTCTAGAAATGACATCGCTGCTGATATTCTCGAAAGAGATAAAATAATTGCTCTAATAAAGAC ACGGTTGAATGCGACTGTACCTTTTCTGCATCAAGATCTCGTTAATGTATGTGAAAGGAGAAATATCACCCCTGTAATTT TATCATTATTCCCAGAGCAATCGCTAACAACTATTTTTACACATAAAATATGGATGATGTTTAAAAACGACCCGCAACTC ATCAATGAATTCACAGGCCAGCAACCAAATTTTAGAAGGAGAAAACTTCATCAGGAGATAAAAAATATAGATAAAAGTGG AAATATGCCCGATATTGGTCTGTACGATGCATATCAACTGATTAAGTTATCAAAAATAAAAATAACCCTTATTTTAGATA GGATTGATAGTGCTATATTTCAAAAACGAAAGAGTGTGATATCACTCTTTTCCGACCTTCAAAATATTCGTGATAACACT CTAAACGCTCAGATAATATTTGCTGTAGAGGAGGATGTTAATTCAGCATTTATAAAGGAAAAACAAGTGACGACTATAGA ACTTCGAAGTGTAGAGCCTGATACATTGGTCAATCATGCGCTAGATACTGCATCTCAAGTCAGTCCGCATTTTAAAATAT CTAAAGATGAGGCAATGAATTTTTTTTTGAAATCAGACTCTGCCGAAAACTATATTGAAAAGCTACAAAAAATGGTCCTC CACCAAAATTCAGATTTTAAAAAAGATAGTATACAGGGAGATGCATACTCCCCCTTCAATTAG
Upstream 100 bases:
>100_bases TAGTGGTCAAAATAATTTAGCCATAACACTAGATTGCTCAATAAAATCAGAAGTTAACTTTGAGTCTTTGTAAATTATCC ATACTAAAAAGGCGAAAGAT
Downstream 100 bases:
>100_bases AGGGTTATCACGGTATATAAATTTATTATAGGATCCTTTGTACCTTGGCTTTCTAAGGCGCAAAGGGGCACATAGCGCCT TAGAGTTTTTGCTCTATTAA
Product: dipeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MIDWYYSRNDIAADILERDKIIALIKTRLNATVPFLHQDLVNVCERRNITPVILSLFPEQSLTTIFTHKIWMMFKNDPQL INEFTGQQPNFRRRKLHQEIKNIDKSGNMPDIGLYDAYQLIKLSKIKITLILDRIDSAIFQKRKSVISLFSDLQNIRDNT LNAQIIFAVEEDVNSAFIKEKQVTTIELRSVEPDTLVNHALDTASQVSPHFKISKDEAMNFFLKSDSAENYIEKLQKMVL HQNSDFKKDSIQGDAYSPFN
Sequences:
>Translated_260_residues MIDWYYSRNDIAADILERDKIIALIKTRLNATVPFLHQDLVNVCERRNITPVILSLFPEQSLTTIFTHKIWMMFKNDPQL INEFTGQQPNFRRRKLHQEIKNIDKSGNMPDIGLYDAYQLIKLSKIKITLILDRIDSAIFQKRKSVISLFSDLQNIRDNT LNAQIIFAVEEDVNSAFIKEKQVTTIELRSVEPDTLVNHALDTASQVSPHFKISKDEAMNFFLKSDSAENYIEKLQKMVL HQNSDFKKDSIQGDAYSPFN >Mature_260_residues MIDWYYSRNDIAADILERDKIIALIKTRLNATVPFLHQDLVNVCERRNITPVILSLFPEQSLTTIFTHKIWMMFKNDPQL INEFTGQQPNFRRRKLHQEIKNIDKSGNMPDIGLYDAYQLIKLSKIKITLILDRIDSAIFQKRKSVISLFSDLQNIRDNT LNAQIIFAVEEDVNSAFIKEKQVTTIELRSVEPDTLVNHALDTASQVSPHFKISKDEAMNFFLKSDSAENYIEKLQKMVL HQNSDFKKDSIQGDAYSPFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30181; Mature: 30181
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDWYYSRNDIAADILERDKIIALIKTRLNATVPFLHQDLVNVCERRNITPVILSLFPEQ CCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCH SLTTIFTHKIWMMFKNDPQLINEFTGQQPNFRRRKLHQEIKNIDKSGNMPDIGLYDAYQL HHHHHHHHHEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH IKLSKIKITLILDRIDSAIFQKRKSVISLFSDLQNIRDNTLNAQIIFAVEEDVNSAFIKE HHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHC KQVTTIELRSVEPDTLVNHALDTASQVSPHFKISKDEAMNFFLKSDSAENYIEKLQKMVL CCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCHHHHHHHHHHHHH HQNSDFKKDSIQGDAYSPFN HCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIDWYYSRNDIAADILERDKIIALIKTRLNATVPFLHQDLVNVCERRNITPVILSLFPEQ CCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCH SLTTIFTHKIWMMFKNDPQLINEFTGQQPNFRRRKLHQEIKNIDKSGNMPDIGLYDAYQL HHHHHHHHHEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH IKLSKIKITLILDRIDSAIFQKRKSVISLFSDLQNIRDNTLNAQIIFAVEEDVNSAFIKE HHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHC KQVTTIELRSVEPDTLVNHALDTASQVSPHFKISKDEAMNFFLKSDSAENYIEKLQKMVL CCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCHHHHHHHHHHHHH HQNSDFKKDSIQGDAYSPFN HCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA