Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119944188

Identifier: 119944188

GI number: 119944188

Start: 516904

End: 517845

Strand: Reverse

Name: 119944188

Synonym: Ping_0408

Alternate gene names: NA

Gene position: 517845-516904 (Counterclockwise)

Preceding gene: 119944189

Following gene: 119944178

Centisome position: 11.36

GC content: 43.31

Gene sequence:

>942_bases
ATGATATATACAAATTCTCAGGCTACGACAGTCGCTATTTCAACAGGTGATCACAAGAAAGCTGCGCTTTATTTCGACAA
GTTAGTACCGACACATTCGAGTGGTGACGTTCCCAATATCCTTAGAGAGCCCGTTCACTTCGCAGACTACAAACTATCTG
AATTGTTTAGTGCAACGTCAGCAGTAGATATTGAGGAGGATCGCTCAAGTGAGGTTCAAACTGCTACCATTAGGCACGTT
TGGAGGGAGGCGCCAATGAGCGTTCGATATTCTAAAGATTACCTGGAGAATGTCTTTGCAAATGTTGTAAAATCTAGTCA
AGAAGCGTGGGCAGATAGTAAATTTGTTACGTCGCTAGTGCTGAGGAACGGGATGGTTGATAAGGGCCACTTTCTCATTC
CTACCTTTGATGATGACACGAGAGAACAGTCTTTCGCAAGGCTCGGTAATGATGAAGTCGTACAACTGACTCTCAGCAAC
CTAGACTTAATCGATACGAGTAAATTGGAATGGCCGCAAATACTAGAACTAAAAAGTGATAGTGACTCAGACAAAAAATT
GCGAAATCTTCTCCTTTTCCTGTACAAGAACTATAGCAATAAGTCGGTAGATTTCATCAGAGACGACTTGCTGCGACAGA
TTGATGAATACCAACAGGTCTGCAAGAAGCACGGTTTTAAACTTGTCACGAGTACTTTATCCACTTTATTGAGCTCTAAG
TCACTGCTCGCAACGACTGGTCTAAGTACTTTAGCTTTACTGTCCGGCTTGCCACTACAGGCATTAACTCCTGTTGCGAT
CTCCGCAGCTGGCTTGGAGATTGGTAAGATTGCAATTAACTATGTCGAGAAGAAACGTGATCTCATAGACTACAAAGAAA
CTCACCCTCTGTCGTATATCTTGCAATTGCCGCTACGCGACACCTTGGTATCGGCAAGATGA

Upstream 100 bases:

>100_bases
AGAATGCACACTAATACACTAATACGCTGCTAGCGTGTCAACACTGGACGATACTAGAGCGTCAACAGTATATTGTATCT
CTATAAAAGGAAGTGAATGA

Downstream 100 bases:

>100_bases
TCATAATCGAGGTCTTGTCTTTTTCCTAAAATAGCAAAACGCAAGCCAGATCCTAAGGGCAGCACATAATATCTAATAGA
TTCAACCATTGAAATCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MIYTNSQATTVAISTGDHKKAALYFDKLVPTHSSGDVPNILREPVHFADYKLSELFSATSAVDIEEDRSSEVQTATIRHV
WREAPMSVRYSKDYLENVFANVVKSSQEAWADSKFVTSLVLRNGMVDKGHFLIPTFDDDTREQSFARLGNDEVVQLTLSN
LDLIDTSKLEWPQILELKSDSDSDKKLRNLLLFLYKNYSNKSVDFIRDDLLRQIDEYQQVCKKHGFKLVTSTLSTLLSSK
SLLATTGLSTLALLSGLPLQALTPVAISAAGLEIGKIAINYVEKKRDLIDYKETHPLSYILQLPLRDTLVSAR

Sequences:

>Translated_313_residues
MIYTNSQATTVAISTGDHKKAALYFDKLVPTHSSGDVPNILREPVHFADYKLSELFSATSAVDIEEDRSSEVQTATIRHV
WREAPMSVRYSKDYLENVFANVVKSSQEAWADSKFVTSLVLRNGMVDKGHFLIPTFDDDTREQSFARLGNDEVVQLTLSN
LDLIDTSKLEWPQILELKSDSDSDKKLRNLLLFLYKNYSNKSVDFIRDDLLRQIDEYQQVCKKHGFKLVTSTLSTLLSSK
SLLATTGLSTLALLSGLPLQALTPVAISAAGLEIGKIAINYVEKKRDLIDYKETHPLSYILQLPLRDTLVSAR
>Mature_313_residues
MIYTNSQATTVAISTGDHKKAALYFDKLVPTHSSGDVPNILREPVHFADYKLSELFSATSAVDIEEDRSSEVQTATIRHV
WREAPMSVRYSKDYLENVFANVVKSSQEAWADSKFVTSLVLRNGMVDKGHFLIPTFDDDTREQSFARLGNDEVVQLTLSN
LDLIDTSKLEWPQILELKSDSDSDKKLRNLLLFLYKNYSNKSVDFIRDDLLRQIDEYQQVCKKHGFKLVTSTLSTLLSSK
SLLATTGLSTLALLSGLPLQALTPVAISAAGLEIGKIAINYVEKKRDLIDYKETHPLSYILQLPLRDTLVSAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35164; Mature: 35164

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYTNSQATTVAISTGDHKKAALYFDKLVPTHSSGDVPNILREPVHFADYKLSELFSATS
CEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH
AVDIEEDRSSEVQTATIRHVWREAPMSVRYSKDYLENVFANVVKSSQEAWADSKFVTSLV
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRNGMVDKGHFLIPTFDDDTREQSFARLGNDEVVQLTLSNLDLIDTSKLEWPQILELKSD
HHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCHHHEECCC
SDSDKKLRNLLLFLYKNYSNKSVDFIRDDLLRQIDEYQQVCKKHGFKLVTSTLSTLLSSK
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
SLLATTGLSTLALLSGLPLQALTPVAISAAGLEIGKIAINYVEKKRDLIDYKETHPLSYI
HHHHHHHHHHHHHHCCCCHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHH
LQLPLRDTLVSAR
HHCCHHHHHHCCC
>Mature Secondary Structure
MIYTNSQATTVAISTGDHKKAALYFDKLVPTHSSGDVPNILREPVHFADYKLSELFSATS
CEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH
AVDIEEDRSSEVQTATIRHVWREAPMSVRYSKDYLENVFANVVKSSQEAWADSKFVTSLV
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRNGMVDKGHFLIPTFDDDTREQSFARLGNDEVVQLTLSNLDLIDTSKLEWPQILELKSD
HHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCHHHEECCC
SDSDKKLRNLLLFLYKNYSNKSVDFIRDDLLRQIDEYQQVCKKHGFKLVTSTLSTLLSSK
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
SLLATTGLSTLALLSGLPLQALTPVAISAAGLEIGKIAINYVEKKRDLIDYKETHPLSYI
HHHHHHHHHHHHHHCCCCHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHH
LQLPLRDTLVSAR
HHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA