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The map label for this gene is yejB [H]

Identifier: 119944075

GI number: 119944075

Start: 377847

End: 378923

Strand: Direct

Name: yejB [H]

Synonym: Ping_0290

Alternate gene names: 119944075

Gene position: 377847-378923 (Clockwise)

Preceding gene: 119944074

Following gene: 119944076

Centisome position: 8.29

GC content: 39.74

Gene sequence:

>1077_bases
ATGAATTATTATATTTTAAGACGTTTATTACTTATTATTCCGACCTTGTTAGGCATTATGACCATTAATTTTTTTATTGT
GCAGATTGCCCCCGGTGGTCCCGTTGAACAAGCGATTGCACAATATCAGGGCATAGGCGATGCTAATACAACGCGTGTTG
CATCAGGCACTAACAGTGAAATAAAACAGGGTGGCGAAAGTAAATACAGGGGTTCCCGAGGGGTGGATCCTGAATATATT
AAAGCACTTGAAAAACTCTATGGTTTTGATAAACCTATTGTAGAGCGTTACTTTTCAATGTTATGGCGTTATATAAAATT
TGATTTTGGCGAAAGCTTTTATCGCAATGAAAAAGTCACCGATTTAATTATTTCAAAAATGCCCGTTTCAATTTCACTGG
GGCTTTGGACGACGCTGCTGGTCTACTTGATTTCTATCCCACTGGGCATTAAAAAAGCCACCTCCCATGGTCATTCTTTT
GACATTTGGACCAGTACTATTGTGACCGTTGCCTATGCGCTCCCAAGTTTTATTGTCGCTATTATGCTGATTGTTCTTTT
TGCCGGTGGCTCTTATTATGACTGGTTTCCTCTGCGCGGATTAACCTCGGATAATTTCTCGGAATTAAGCTTGATGGCGC
AAATTAAAGATTATTTCTGGCATCTTACCCTGCCTGTTTTTGCCTCTGTATTGGGCAGTTTTGCAACCCTGACTATGCTT
ACTAAAAACTCTTTCCTTGATGAAATTCATAAACAATATGTGGTGACTGCCCGCGCCAAGGGCTGCTCGGATAAGCGCAT
TTTGTATGGTCATGTTTTTAGAAATGCCATGTTATTAGTCTTGGCGGGTTTACCCGCGGCATTGATTGGTATTTTTTTTA
CTGGTTCGATGTTAATTGAAGTTATTTTTTCTTTAGACGGTTTAGGTCTATTAAGCTTTGAATCTGTTATCAACCGGGAT
TACCCGGTGATTTTTGCCTCGCTTTATATGTTTACTCTAGTGGGGCTGGTTTTAAAACTGATCAGTGATATCACTTATAC
TCTGATTGATCCACGCATTACTTTTGAGGGGCGTTAA

Upstream 100 bases:

>100_bases
GGAATAAATTCTCTCGTCCGAATATTGCGCCAATATATGATTTGGGTTTATCCACCTGGTGGTCAACGCAGGCTGAAAAT
GATCAGGAGGAGAGTCAATA

Downstream 100 bases:

>100_bases
GATGTCATTATTAAACACATGGCAAGAGATGCGCAACAATCCGGTGAATGTGGATCGCTGGTTGCAGTTCAAAAATAATA
AACGCGGTTATTGGTCGCTG

Product: ABC transporter substrate binding inner membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNYYILRRLLLIIPTLLGIMTINFFIVQIAPGGPVEQAIAQYQGIGDANTTRVASGTNSEIKQGGESKYRGSRGVDPEYI
KALEKLYGFDKPIVERYFSMLWRYIKFDFGESFYRNEKVTDLIISKMPVSISLGLWTTLLVYLISIPLGIKKATSHGHSF
DIWTSTIVTVAYALPSFIVAIMLIVLFAGGSYYDWFPLRGLTSDNFSELSLMAQIKDYFWHLTLPVFASVLGSFATLTML
TKNSFLDEIHKQYVVTARAKGCSDKRILYGHVFRNAMLLVLAGLPAALIGIFFTGSMLIEVIFSLDGLGLLSFESVINRD
YPVIFASLYMFTLVGLVLKLISDITYTLIDPRITFEGR

Sequences:

>Translated_358_residues
MNYYILRRLLLIIPTLLGIMTINFFIVQIAPGGPVEQAIAQYQGIGDANTTRVASGTNSEIKQGGESKYRGSRGVDPEYI
KALEKLYGFDKPIVERYFSMLWRYIKFDFGESFYRNEKVTDLIISKMPVSISLGLWTTLLVYLISIPLGIKKATSHGHSF
DIWTSTIVTVAYALPSFIVAIMLIVLFAGGSYYDWFPLRGLTSDNFSELSLMAQIKDYFWHLTLPVFASVLGSFATLTML
TKNSFLDEIHKQYVVTARAKGCSDKRILYGHVFRNAMLLVLAGLPAALIGIFFTGSMLIEVIFSLDGLGLLSFESVINRD
YPVIFASLYMFTLVGLVLKLISDITYTLIDPRITFEGR
>Mature_358_residues
MNYYILRRLLLIIPTLLGIMTINFFIVQIAPGGPVEQAIAQYQGIGDANTTRVASGTNSEIKQGGESKYRGSRGVDPEYI
KALEKLYGFDKPIVERYFSMLWRYIKFDFGESFYRNEKVTDLIISKMPVSISLGLWTTLLVYLISIPLGIKKATSHGHSF
DIWTSTIVTVAYALPSFIVAIMLIVLFAGGSYYDWFPLRGLTSDNFSELSLMAQIKDYFWHLTLPVFASVLGSFATLTML
TKNSFLDEIHKQYVVTARAKGCSDKRILYGHVFRNAMLLVLAGLPAALIGIFFTGSMLIEVIFSLDGLGLLSFESVINRD
YPVIFASLYMFTLVGLVLKLISDITYTLIDPRITFEGR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=365, Percent_Identity=61.6438356164384, Blast_Score=464, Evalue=1e-132,
Organism=Escherichia coli, GI1787497, Length=356, Percent_Identity=30.6179775280899, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1789965, Length=374, Percent_Identity=27.807486631016, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1789888, Length=353, Percent_Identity=28.0453257790368, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1787053, Length=356, Percent_Identity=26.123595505618, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787761, Length=299, Percent_Identity=24.4147157190635, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1787550, Length=267, Percent_Identity=22.4719101123595, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40194; Mature: 40194

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYYILRRLLLIIPTLLGIMTINFFIVQIAPGGPVEQAIAQYQGIGDANTTRVASGTNSE
CCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCCCCCEECCCCCHH
IKQGGESKYRGSRGVDPEYIKALEKLYGFDKPIVERYFSMLWRYIKFDFGESFYRNEKVT
HHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHH
DLIISKMPVSISLGLWTTLLVYLISIPLGIKKATSHGHSFDIWTSTIVTVAYALPSFIVA
HHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IMLIVLFAGGSYYDWFPLRGLTSDNFSELSLMAQIKDYFWHLTLPVFASVLGSFATLTML
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKNSFLDEIHKQYVVTARAKGCSDKRILYGHVFRNAMLLVLAGLPAALIGIFFTGSMLIE
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFSLDGLGLLSFESVINRDYPVIFASLYMFTLVGLVLKLISDITYTLIDPRITFEGR
HHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
>Mature Secondary Structure
MNYYILRRLLLIIPTLLGIMTINFFIVQIAPGGPVEQAIAQYQGIGDANTTRVASGTNSE
CCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCCCCCEECCCCCHH
IKQGGESKYRGSRGVDPEYIKALEKLYGFDKPIVERYFSMLWRYIKFDFGESFYRNEKVT
HHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHH
DLIISKMPVSISLGLWTTLLVYLISIPLGIKKATSHGHSFDIWTSTIVTVAYALPSFIVA
HHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IMLIVLFAGGSYYDWFPLRGLTSDNFSELSLMAQIKDYFWHLTLPVFASVLGSFATLTML
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKNSFLDEIHKQYVVTARAKGCSDKRILYGHVFRNAMLLVLAGLPAALIGIFFTGSMLIE
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFSLDGLGLLSFESVINRDYPVIFASLYMFTLVGLVLKLISDITYTLIDPRITFEGR
HHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]