| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is eutB [H]
Identifier: 119944061
GI number: 119944061
Start: 361059
End: 362459
Strand: Direct
Name: eutB [H]
Synonym: Ping_0276
Alternate gene names: 119944061
Gene position: 361059-362459 (Clockwise)
Preceding gene: 119944059
Following gene: 119944062
Centisome position: 7.92
GC content: 46.54
Gene sequence:
>1401_bases ATGGCCAATTATCGTTATCAGCTCGGCAGTCACGTTTATCAATTTGCCAGTCTTGCCGATGTGATGGCAAAAGCCTCTCC TTTAAGGTCAGGGGATCAACTTGCAGGCGTTGCTGCACTCTCCTCTGAGCAGCGCGTGGTTGCACAAATGCTCTTAGCAG ATATGCCGTTGAAAGATTTTCTGCAGGAAATGCTTATTCCCTACGAAAGTGATGAAATTACTCGCCTTATTATTGATGAG CATGATTCAGGTGCTTTCGCTGAAATAGCCCATTTAACCGTTGGTGATTTTCGTAATTGGCTGTTAAAAGAAACAACCAC GGCAGTAGAGCTGGCAAGAGTTCGTTCGGGTATTACCCCGGAGATGGCGGCAGCAGTAAGCAAAATTATGCGCAATCAGG ATTTAATTCTTGTTGCTAAAAAGTGTCATATTATCACTCAATTTCGCAACACTATTGGTTTGTCCGGACATTTATCAACA CGCCTGCAACCAAATCATCCGACAGACGATGTCAATGGCATCGCGGCCTCTCTTTTTGATGGTCTAATGTATGGTAATGG TGATGCTGTGATCGGTATAAATCCGGCAACGGACAATGTGCAGCAAGCGGTCAAACTAATGAAGTTAATGGATGATGTTA TTCAGCATTATGAAATACCCACCCAGTCCTGTGTGTTAACCCATGTCACTAATACTATTGAAGCGATCGAGCTTGGTGCA CCCGTCGACCTTGTTTTTCAGTCTATTGGTGGTACTGAAGCGACCAACCAGGGCTTTGGCATCAATCTTAATGTGCTCAA TGAAGCGCACCAGGCAGCACTGGAATTAAAGCGCGGCACCGTGGGCAATAACCTGATGTATTTTGAAACCGGGCAGGGCA GCGCGCTCTCTGCCAATGGGCATCATAATATTGACCAACAGACCTGTGAAGCCCGTGCTTATGCGGTTGCGCGTAAGTTT AATCCGTTGCTGGTCAATACCGTGGTGGGCTTTATTGGTCCTGAATATTTGTTTGACGGCAAGCAGATTATTCGAGCAGG GTTGGAAGATCATTTTTGCGGCAAGTTACTGGGTCTACCGATGGGGTGCGACATCTGTTACACCAACCATGCCTATGCAG ATCAGAATGATATGGATAACTTACTGACCCTGCTGGGGGTGGCTGAATGCTCCTTCATCATGGGTATTCCGGGCTCCGAT GACATTATGCTTAATTACCAGACCACCTCTTTTCATGATGCGCTCTATGCCCGGCAGGTGTTGGGGCTTCGCCCTGCACC TGAATTCGATCAATGGCTAAAAAAGATGAACATCTCATCCGCAGATAACCGTTTTCAGCTCAGTGACCAACTACCGGCAA GTTTTGCGCACCCATTGGAAATGATTAAGGAAGCTTTATGA
Upstream 100 bases:
>100_bases ACGTTATTCACTTGGAACGATATTCGCTTCACCTTACTTAGATGCTTTGTAAAGTTTGTTTGCAAAGTTCGCGCCCACTT TAATATTCGAGGTATCTAAA
Downstream 100 bases:
>100_bases ATAAGGTTGTGCCAAGCAGTGAAGAGATGGTTCATAAAGATCCCTGGGAAAAATTACGTCAATTTACCAATGCTCGCATT GGACTTGGCCGGGTAGGAAC
Product: ethanolamine ammonia lyase large subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MANYRYQLGSHVYQFASLADVMAKASPLRSGDQLAGVAALSSEQRVVAQMLLADMPLKDFLQEMLIPYESDEITRLIIDE HDSGAFAEIAHLTVGDFRNWLLKETTTAVELARVRSGITPEMAAAVSKIMRNQDLILVAKKCHIITQFRNTIGLSGHLST RLQPNHPTDDVNGIAASLFDGLMYGNGDAVIGINPATDNVQQAVKLMKLMDDVIQHYEIPTQSCVLTHVTNTIEAIELGA PVDLVFQSIGGTEATNQGFGINLNVLNEAHQAALELKRGTVGNNLMYFETGQGSALSANGHHNIDQQTCEARAYAVARKF NPLLVNTVVGFIGPEYLFDGKQIIRAGLEDHFCGKLLGLPMGCDICYTNHAYADQNDMDNLLTLLGVAECSFIMGIPGSD DIMLNYQTTSFHDALYARQVLGLRPAPEFDQWLKKMNISSADNRFQLSDQLPASFAHPLEMIKEAL
Sequences:
>Translated_466_residues MANYRYQLGSHVYQFASLADVMAKASPLRSGDQLAGVAALSSEQRVVAQMLLADMPLKDFLQEMLIPYESDEITRLIIDE HDSGAFAEIAHLTVGDFRNWLLKETTTAVELARVRSGITPEMAAAVSKIMRNQDLILVAKKCHIITQFRNTIGLSGHLST RLQPNHPTDDVNGIAASLFDGLMYGNGDAVIGINPATDNVQQAVKLMKLMDDVIQHYEIPTQSCVLTHVTNTIEAIELGA PVDLVFQSIGGTEATNQGFGINLNVLNEAHQAALELKRGTVGNNLMYFETGQGSALSANGHHNIDQQTCEARAYAVARKF NPLLVNTVVGFIGPEYLFDGKQIIRAGLEDHFCGKLLGLPMGCDICYTNHAYADQNDMDNLLTLLGVAECSFIMGIPGSD DIMLNYQTTSFHDALYARQVLGLRPAPEFDQWLKKMNISSADNRFQLSDQLPASFAHPLEMIKEAL >Mature_465_residues ANYRYQLGSHVYQFASLADVMAKASPLRSGDQLAGVAALSSEQRVVAQMLLADMPLKDFLQEMLIPYESDEITRLIIDEH DSGAFAEIAHLTVGDFRNWLLKETTTAVELARVRSGITPEMAAAVSKIMRNQDLILVAKKCHIITQFRNTIGLSGHLSTR LQPNHPTDDVNGIAASLFDGLMYGNGDAVIGINPATDNVQQAVKLMKLMDDVIQHYEIPTQSCVLTHVTNTIEAIELGAP VDLVFQSIGGTEATNQGFGINLNVLNEAHQAALELKRGTVGNNLMYFETGQGSALSANGHHNIDQQTCEARAYAVARKFN PLLVNTVVGFIGPEYLFDGKQIIRAGLEDHFCGKLLGLPMGCDICYTNHAYADQNDMDNLLTLLGVAECSFIMGIPGSDD IMLNYQTTSFHDALYARQVLGLRPAPEFDQWLKKMNISSADNRFQLSDQLPASFAHPLEMIKEAL
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=434, Percent_Identity=52.073732718894, Blast_Score=461, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 51087; Mature: 50956
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYRYQLGSHVYQFASLADVMAKASPLRSGDQLAGVAALSSEQRVVAQMLLADMPLKDF CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHH LQEMLIPYESDEITRLIIDEHDSGAFAEIAHLTVGDFRNWLLKETTTAVELARVRSGITP HHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EMAAAVSKIMRNQDLILVAKKCHIITQFRNTIGLSGHLSTRLQPNHPTDDVNGIAASLFD HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH GLMYGNGDAVIGINPATDNVQQAVKLMKLMDDVIQHYEIPTQSCVLTHVTNTIEAIELGA HHEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC PVDLVFQSIGGTEATNQGFGINLNVLNEAHQAALELKRGTVGNNLMYFETGQGSALSANG CHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCC HHNIDQQTCEARAYAVARKFNPLLVNTVVGFIGPEYLFDGKQIIRAGLEDHFCGKLLGLP CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCC MGCDICYTNHAYADQNDMDNLLTLLGVAECSFIMGIPGSDDIMLNYQTTSFHDALYARQV CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHHHHHHHHH LGLRPAPEFDQWLKKMNISSADNRFQLSDQLPASFAHPLEMIKEAL HCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure ANYRYQLGSHVYQFASLADVMAKASPLRSGDQLAGVAALSSEQRVVAQMLLADMPLKDF CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHH LQEMLIPYESDEITRLIIDEHDSGAFAEIAHLTVGDFRNWLLKETTTAVELARVRSGITP HHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EMAAAVSKIMRNQDLILVAKKCHIITQFRNTIGLSGHLSTRLQPNHPTDDVNGIAASLFD HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH GLMYGNGDAVIGINPATDNVQQAVKLMKLMDDVIQHYEIPTQSCVLTHVTNTIEAIELGA HHEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC PVDLVFQSIGGTEATNQGFGINLNVLNEAHQAALELKRGTVGNNLMYFETGQGSALSANG CHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCC HHNIDQQTCEARAYAVARKFNPLLVNTVVGFIGPEYLFDGKQIIRAGLEDHFCGKLLGLP CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCC MGCDICYTNHAYADQNDMDNLLTLLGVAECSFIMGIPGSDDIMLNYQTTSFHDALYARQV CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHHHHHHHHH LGLRPAPEFDQWLKKMNISSADNRFQLSDQLPASFAHPLEMIKEAL HCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]