| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944043
Identifier: 119944043
GI number: 119944043
Start: 334620
End: 337346
Strand: Direct
Name: 119944043
Synonym: Ping_0257
Alternate gene names: NA
Gene position: 334620-337346 (Clockwise)
Preceding gene: 119944041
Following gene: 119944045
Centisome position: 7.34
GC content: 36.3
Gene sequence:
>2727_bases ATGAATGACAACAACAGCCCGGACGAAAATAATGTCTGGCGTATTGATAAAACACCTAACTTACTCCATCGATGTTTTAT TTCAGAACAGTTGTGTGTCGAGGAAAGAAAAATTTGTAAGTATTGGGAGGAAAGACAAAGTGGCAAGAATACACCTCAAG CATTTGTGGTCATGGCCTTTAATTTCCGTAACAACATGCTATACGAACGACAAATTAAACCTATGCTGGCCAATCTAGAT GAACCTCTGCTCCCTTGCCGTGCAGATACTCTTATACGTACGGGTTATATTGTGTGCAGAAAGGTTTGCCAGCCGATTCT TGAGTCCGACTTAGTGGTGGTGGAATTAACCATACTCAATAAAAACGTCACTTACGAACTTGGACTGAGCTTGGCACTGG AGCGTAAAATATTATTAATGGTTCAGGAGCAAGAGCCGGAAGAAAAAATAGATTTATCGAATGACGTTAATAATCTGTTC AGAAGATTAGATATTAAAGAATCCGAATTATTTCGCTACAAGCCATTTGGCTTTATCACAACAAGTGCGCAAGAGTTACA AAATTCCCTTTGGAAGGGAGCCGATAAAGAATTGCGACAAACAGATAGCCTGCAATGCAGGATAGGAGTTCTCGGCGCGG ATCATCTGGTGCCATTATCAACTTCAAATATAGATTTTCAGATACCGTTACCAAATTCAAATATAGAAACTCAACCTAAA AGTCAATTAACAGATGCCCTCAGATGCCACCTAGGGAATGTCATTCGTGATGCAGTATGTAATATACTTGGTTATGAATC AGAAAAAGAATATGAAGAATACCTTAAAAGCCGGGGGAATAGTAAACAAAAAAAAGAAGACAAAGTCGATGTTGATAAGT GCAAGGAGCGCAACGATTTTCTTGGAAACTACACGGCGACTCAAGGCAAAAAGTTTAGCGATATATCTGCACAAGAATAC AACAAAAAGAAATATTACCCATGGATGCATTTACAGTCGATGCGAACTGATAAAAAATCATTCACTGAAATAGTTGATTT TATTGATAGTCGAGAGTGTTTGGCCATTGATTTAACCAAAACAGGCAATAATCTCAATGATGCAATCAATCTGTTCTGGC TCGGATATGCACACGGTAAAGGCAAAACAGTGATCCCTGTCTATGCTTATAGCTCAGATAAGGAACAAGCCGAATTAGGT CATAGTAACTTTGACGTTCAGGGGCTCTATTTTCTTGGTTATGATATAAGAAACCCAAAAGCGATCGATGATGATTTAAT GGCCATGTTTAAGGACATATTAGAAAGCACAGAAACAGAAAGATCGCGAAACAAACTGTGGAAGCCTATTTTTGAAGGAG CGGATTTACAAATATCGGTAGGAGCAACAGTACATAAAGGCAGCGAAAAATACTCTTTGATAGAATGGGATCATATGGTC TTAGCTGAATTGCACAGTTTCATCTCAGAAAAAAGGTCAACACTACACTACAAAATAAGTTACCCGACCTATCAACAACC GGACACAGTGAACAAAAAACTCATAGAGGGTGTTTGTTTAGATAAATTTTTGCAAGGAAAAATAGAGAAGCAAAATGTAA TAATCATTGGCTCCCCTGATGTCAATATCATCACAGAATTAGTGCTGGCAAAGGCAAAGGGCATTGCACCATTCAGTCCA GAAAAAATAACAAAGGAAAGTCAAAAATTTTTCGAAGGGTTAGTCTCAGTGAAAAGTAACAATAATAATACACGAGGAAT TAGATACTATTATAAAGACAGCAAGGACAAAGAAGAAGATAAATATGAATCTAGTTATAATTATAGGTTCTTAGATAAAC CTGATAATTCAGAGCAATCTGACGATAAAGTTGTCAGTTCTAATCAATATACTTTTTTTCAAAATGAAGATGAAGATGAA GATGAAGATAAAGACAAAGAAGAAAAAGAAAAAGAAAAAAAAGGAGAAAAAGCAAAAAAAGATAAAGGCTCAACAGGCTT TACTAAATTTCATCGTTCCTATGGGCATATCGCCATCTTCGAAAATCCTTATTCAGAAGGAAAAAGAATAATAGTTCTAT CTGGCATTAGCGGGCCTGCAACTCTGGCATTGGCGCAGATGCTAACCGGCTGTATAAATGAAGAAACAAACTACCAGCTG CAATATAGAGTAGATAAAGAAAAGATTAAAGTAGATGAAAGAAAGATCCATATTTTAGGAGGAGTAGCTGAAAATGAAAA TGAAAATGAAAATGATAAAAGTAAAACGGAGTCTTTTATAGCGGATTTATTTTATGAACACCAAGACCAAGAAGATTTAA GATCTATATTTAAAGGAGTTAAAGAAGATAACAAAACTGAAGAAGTTAAAAAGAAAATAAAATATGAAACTGACTCAGGA AAACAGAAGGGTTATAGACCGTTAAAGATCGACCTTTCCAAAAAATCACTAGAGATGCTTGAGAAAATAAATACAGAAAT AACTGAAGGTTATAAACAACAAACTAAAAATAAAAAACAGACTAATAATAATTTTATGGTCGAAGCTGTCGTCGAGGTCT TACTGACAGAAAATGTGGAACATGAGGATAAGAATACGGTCATTCATTGGCAAGATCCTAGAAAGGTTGTTGCCTGGCGG TTCGCCAAGGACCCATTCAGGACTAAGACTCCATTAAAGGACATCAGTTCTGATCTGCATTTCCCTAAAAGCGAGAAACA ACAGTAA
Upstream 100 bases:
>100_bases CGCAAAATGAGTAGGAAATAGCGCCATACTATCGACTTACCGGGGCCGTATAAATCTCGGGTAACAAAAGACTTTTACTT ATAGAAGAGAGGTAAACGTT
Downstream 100 bases:
>100_bases CAAGCAGTGACGGTACTGTTTGTATCAGTAGTTGCAGTTAGACGCAGCGCTTTAACTCGTTGTCGACAAGGTAACAGTCG GTTTTGATATAAATATCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 908; Mature: 908
Protein sequence:
>908_residues MNDNNSPDENNVWRIDKTPNLLHRCFISEQLCVEERKICKYWEERQSGKNTPQAFVVMAFNFRNNMLYERQIKPMLANLD EPLLPCRADTLIRTGYIVCRKVCQPILESDLVVVELTILNKNVTYELGLSLALERKILLMVQEQEPEEKIDLSNDVNNLF RRLDIKESELFRYKPFGFITTSAQELQNSLWKGADKELRQTDSLQCRIGVLGADHLVPLSTSNIDFQIPLPNSNIETQPK SQLTDALRCHLGNVIRDAVCNILGYESEKEYEEYLKSRGNSKQKKEDKVDVDKCKERNDFLGNYTATQGKKFSDISAQEY NKKKYYPWMHLQSMRTDKKSFTEIVDFIDSRECLAIDLTKTGNNLNDAINLFWLGYAHGKGKTVIPVYAYSSDKEQAELG HSNFDVQGLYFLGYDIRNPKAIDDDLMAMFKDILESTETERSRNKLWKPIFEGADLQISVGATVHKGSEKYSLIEWDHMV LAELHSFISEKRSTLHYKISYPTYQQPDTVNKKLIEGVCLDKFLQGKIEKQNVIIIGSPDVNIITELVLAKAKGIAPFSP EKITKESQKFFEGLVSVKSNNNNTRGIRYYYKDSKDKEEDKYESSYNYRFLDKPDNSEQSDDKVVSSNQYTFFQNEDEDE DEDKDKEEKEKEKKGEKAKKDKGSTGFTKFHRSYGHIAIFENPYSEGKRIIVLSGISGPATLALAQMLTGCINEETNYQL QYRVDKEKIKVDERKIHILGGVAENENENENDKSKTESFIADLFYEHQDQEDLRSIFKGVKEDNKTEEVKKKIKYETDSG KQKGYRPLKIDLSKKSLEMLEKINTEITEGYKQQTKNKKQTNNNFMVEAVVEVLLTENVEHEDKNTVIHWQDPRKVVAWR FAKDPFRTKTPLKDISSDLHFPKSEKQQ
Sequences:
>Translated_908_residues MNDNNSPDENNVWRIDKTPNLLHRCFISEQLCVEERKICKYWEERQSGKNTPQAFVVMAFNFRNNMLYERQIKPMLANLD EPLLPCRADTLIRTGYIVCRKVCQPILESDLVVVELTILNKNVTYELGLSLALERKILLMVQEQEPEEKIDLSNDVNNLF RRLDIKESELFRYKPFGFITTSAQELQNSLWKGADKELRQTDSLQCRIGVLGADHLVPLSTSNIDFQIPLPNSNIETQPK SQLTDALRCHLGNVIRDAVCNILGYESEKEYEEYLKSRGNSKQKKEDKVDVDKCKERNDFLGNYTATQGKKFSDISAQEY NKKKYYPWMHLQSMRTDKKSFTEIVDFIDSRECLAIDLTKTGNNLNDAINLFWLGYAHGKGKTVIPVYAYSSDKEQAELG HSNFDVQGLYFLGYDIRNPKAIDDDLMAMFKDILESTETERSRNKLWKPIFEGADLQISVGATVHKGSEKYSLIEWDHMV LAELHSFISEKRSTLHYKISYPTYQQPDTVNKKLIEGVCLDKFLQGKIEKQNVIIIGSPDVNIITELVLAKAKGIAPFSP EKITKESQKFFEGLVSVKSNNNNTRGIRYYYKDSKDKEEDKYESSYNYRFLDKPDNSEQSDDKVVSSNQYTFFQNEDEDE DEDKDKEEKEKEKKGEKAKKDKGSTGFTKFHRSYGHIAIFENPYSEGKRIIVLSGISGPATLALAQMLTGCINEETNYQL QYRVDKEKIKVDERKIHILGGVAENENENENDKSKTESFIADLFYEHQDQEDLRSIFKGVKEDNKTEEVKKKIKYETDSG KQKGYRPLKIDLSKKSLEMLEKINTEITEGYKQQTKNKKQTNNNFMVEAVVEVLLTENVEHEDKNTVIHWQDPRKVVAWR FAKDPFRTKTPLKDISSDLHFPKSEKQQ >Mature_908_residues MNDNNSPDENNVWRIDKTPNLLHRCFISEQLCVEERKICKYWEERQSGKNTPQAFVVMAFNFRNNMLYERQIKPMLANLD EPLLPCRADTLIRTGYIVCRKVCQPILESDLVVVELTILNKNVTYELGLSLALERKILLMVQEQEPEEKIDLSNDVNNLF RRLDIKESELFRYKPFGFITTSAQELQNSLWKGADKELRQTDSLQCRIGVLGADHLVPLSTSNIDFQIPLPNSNIETQPK SQLTDALRCHLGNVIRDAVCNILGYESEKEYEEYLKSRGNSKQKKEDKVDVDKCKERNDFLGNYTATQGKKFSDISAQEY NKKKYYPWMHLQSMRTDKKSFTEIVDFIDSRECLAIDLTKTGNNLNDAINLFWLGYAHGKGKTVIPVYAYSSDKEQAELG HSNFDVQGLYFLGYDIRNPKAIDDDLMAMFKDILESTETERSRNKLWKPIFEGADLQISVGATVHKGSEKYSLIEWDHMV LAELHSFISEKRSTLHYKISYPTYQQPDTVNKKLIEGVCLDKFLQGKIEKQNVIIIGSPDVNIITELVLAKAKGIAPFSP EKITKESQKFFEGLVSVKSNNNNTRGIRYYYKDSKDKEEDKYESSYNYRFLDKPDNSEQSDDKVVSSNQYTFFQNEDEDE DEDKDKEEKEKEKKGEKAKKDKGSTGFTKFHRSYGHIAIFENPYSEGKRIIVLSGISGPATLALAQMLTGCINEETNYQL QYRVDKEKIKVDERKIHILGGVAENENENENDKSKTESFIADLFYEHQDQEDLRSIFKGVKEDNKTEEVKKKIKYETDSG KQKGYRPLKIDLSKKSLEMLEKINTEITEGYKQQTKNKKQTNNNFMVEAVVEVLLTENVEHEDKNTVIHWQDPRKVVAWR FAKDPFRTKTPLKDISSDLHFPKSEKQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105146; Mature: 105146
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNNSPDENNVWRIDKTPNLLHRCFISEQLCVEERKICKYWEERQSGKNTPQAFVVMAF CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE NFRNNMLYERQIKPMLANLDEPLLPCRADTLIRTGYIVCRKVCQPILESDLVVVELTILN ECCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEC KNVTYELGLSLALERKILLMVQEQEPEEKIDLSNDVNNLFRRLDIKESELFRYKPFGFIT CCEEEEECCHHHCCCEEEEEEECCCCHHHCCCHHHHHHHHHHCCCCHHHHEEECCCEEEE TSAQELQNSLWKGADKELRQTDSLQCRIGVLGADHLVPLSTSNIDFQIPLPNSNIETQPK CCHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCH SQLTDALRCHLGNVIRDAVCNILGYESEKEYEEYLKSRGNSKQKKEDKVDVDKCKERNDF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHCCC LGNYTATQGKKFSDISAQEYNKKKYYPWMHLQSMRTDKKSFTEIVDFIDSRECLAIDLTK CCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEC TGNNLNDAINLFWLGYAHGKGKTVIPVYAYSSDKEQAELGHSNFDVQGLYFLGYDIRNPK CCCCCCHHEEEEEEEEEECCCCEEEEEEEECCCCHHHHCCCCCCCCEEEEEEEEECCCCC AIDDDLMAMFKDILESTETERSRNKLWKPIFEGADLQISVGATVHKGSEKYSLIEWDHMV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCEEEEHHHHH LAELHSFISEKRSTLHYKISYPTYQQPDTVNKKLIEGVCLDKFLQGKIEKQNVIIIGSPD HHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC VNIITELVLAKAKGIAPFSPEKITKESQKFFEGLVSVKSNNNNTRGIRYYYKDSKDKEED HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHH KYESSYNYRFLDKPDNSEQSDDKVVSSNQYTFFQNEDEDEDEDKDKEEKEKEKKGEKAKK HHHCCCCEEEECCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCHHHHHHHHHCHHHHH DKGSTGFTKFHRSYGHIAIFENPYSEGKRIIVLSGISGPATLALAQMLTGCINEETNYQL CCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEE QYRVDKEKIKVDERKIHILGGVAENENENENDKSKTESFIADLFYEHQDQEDLRSIFKGV EEEECHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KEDNKTEEVKKKIKYETDSGKQKGYRPLKIDLSKKSLEMLEKINTEITEGYKQQTKNKKQ CCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHH TNNNFMVEAVVEVLLTENVEHEDKNTVIHWQDPRKVVAWRFAKDPFRTKTPLKDISSDLH CCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHCC FPKSEKQQ CCCCCCCC >Mature Secondary Structure MNDNNSPDENNVWRIDKTPNLLHRCFISEQLCVEERKICKYWEERQSGKNTPQAFVVMAF CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE NFRNNMLYERQIKPMLANLDEPLLPCRADTLIRTGYIVCRKVCQPILESDLVVVELTILN ECCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEC KNVTYELGLSLALERKILLMVQEQEPEEKIDLSNDVNNLFRRLDIKESELFRYKPFGFIT CCEEEEECCHHHCCCEEEEEEECCCCHHHCCCHHHHHHHHHHCCCCHHHHEEECCCEEEE TSAQELQNSLWKGADKELRQTDSLQCRIGVLGADHLVPLSTSNIDFQIPLPNSNIETQPK CCHHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCH SQLTDALRCHLGNVIRDAVCNILGYESEKEYEEYLKSRGNSKQKKEDKVDVDKCKERNDF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHCCC LGNYTATQGKKFSDISAQEYNKKKYYPWMHLQSMRTDKKSFTEIVDFIDSRECLAIDLTK CCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEC TGNNLNDAINLFWLGYAHGKGKTVIPVYAYSSDKEQAELGHSNFDVQGLYFLGYDIRNPK CCCCCCHHEEEEEEEEEECCCCEEEEEEEECCCCHHHHCCCCCCCCEEEEEEEEECCCCC AIDDDLMAMFKDILESTETERSRNKLWKPIFEGADLQISVGATVHKGSEKYSLIEWDHMV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCEEEEHHHHH LAELHSFISEKRSTLHYKISYPTYQQPDTVNKKLIEGVCLDKFLQGKIEKQNVIIIGSPD HHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC VNIITELVLAKAKGIAPFSPEKITKESQKFFEGLVSVKSNNNNTRGIRYYYKDSKDKEED HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHH KYESSYNYRFLDKPDNSEQSDDKVVSSNQYTFFQNEDEDEDEDKDKEEKEKEKKGEKAKK HHHCCCCEEEECCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCHHHHHHHHHCHHHHH DKGSTGFTKFHRSYGHIAIFENPYSEGKRIIVLSGISGPATLALAQMLTGCINEETNYQL CCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEE QYRVDKEKIKVDERKIHILGGVAENENENENDKSKTESFIADLFYEHQDQEDLRSIFKGV EEEECHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KEDNKTEEVKKKIKYETDSGKQKGYRPLKIDLSKKSLEMLEKINTEITEGYKQQTKNKKQ CCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHH TNNNFMVEAVVEVLLTENVEHEDKNTVIHWQDPRKVVAWRFAKDPFRTKTPLKDISSDLH CCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHCC FPKSEKQQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA