| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944041
Identifier: 119944041
GI number: 119944041
Start: 332086
End: 333144
Strand: Direct
Name: 119944041
Synonym: Ping_0255
Alternate gene names: NA
Gene position: 332086-333144 (Clockwise)
Preceding gene: 119944040
Following gene: 119944043
Centisome position: 7.28
GC content: 43.15
Gene sequence:
>1059_bases TTGGAAGAAGTAGTGATTATCGGCGGTGGCGTTGCTGGACTATCGTGCCTAAATGCATTGTTGGATCAAGGTATATCGGC GCTTTTAATCGAAGGCTCAACCATCGGCACGCCTAAAATGTGTGGCGAATTCTTAGCACCGATTGCGGCACAGCAACTAC AGCGTTGGGACGTTGATCCTCTTATCCCCATTCCTCATGCCGCCTTTTATGCTGGCATTAGGCAATTAGATATTCACTTC ACCAAGCCCTCTGCTGCCATATCAAGAAGTGACGTTGAGCTAAAGTTAGCTGCACGAGCGCGCAGACTAGGTGGACGCAT ACGCGAAAACACATCTCTCGAGCACACAACACCTGCCACCGAGAGAACGCCATTTTATTTCAAATTATCCACGGGTGAAA TCATTGAGGCTAAAAGTGCTTTTTTTGCAACGGGTAAGTTTGGAAACAACAAAGACAATAAAAAAATTGCGCTACCCTAT TTTGGATTTAAATTGCATTTTTCCCATACTGAAAACGATCAGAGTCTTAAGATGTTCAGTCTGGATAAAGCTTATTTGGG CATTGTTCCGATCACCGAGACAATAAGTAACTGTGCCTGTTTGGCAAAACGAGAAGCGGTGGATGCTGCAACTTCGCCGA ATGAATACTTTCAGCATCTGACAAAATCTCATCCGGTGCTTAAAAAAATATTCACCCCGCTTGATCTTAGCTCTATTGAT ATTCTGTCGGGTCGCGCTCCTGCATTTACTCAAAAAAATCCGCCTAACTGGCCTAACAGCTACTGGATAGGTGATACATT AGCGTCGCTTTACCCTGCTATTGGCTCTGGATTTGCACATAGCGTTGATAGCGCTATTCAAGCTGTGCAGTTTTACTTAA AACAACAACCTAAGCTGTATCGTACCAATTATTCGAAATCGATTAAAACAAAAGTACTATTAGGGAACGTATTTAACACT GCATTACTGCACCCAAAAGTGGGTCAATTGGCTCTTCCTTTACTGAAACGATCCCCTAAGCTGGTTAACCTTGTACTCAA AAAGCTTGATTATGTTTAA
Upstream 100 bases:
>100_bases GCGGTTTTATCCGTCAAGAATTAATCACACTGTTAGAACAAGCTGGCATGAAACACTACCAAGTTAAATGGTGTTTCCCA TTTCGTTGGAGGGTTATCAT
Downstream 100 bases:
>100_bases TGCGGCTGGTTTATCTTAAGTAACATTGATTCTAAGGTTAATCCCGGTCCAAAAGCGCAACTAAAAATAGTTTCTTGATG ATTATTAACCGTCAAATGGG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MEEVVIIGGGVAGLSCLNALLDQGISALLIEGSTIGTPKMCGEFLAPIAAQQLQRWDVDPLIPIPHAAFYAGIRQLDIHF TKPSAAISRSDVELKLAARARRLGGRIRENTSLEHTTPATERTPFYFKLSTGEIIEAKSAFFATGKFGNNKDNKKIALPY FGFKLHFSHTENDQSLKMFSLDKAYLGIVPITETISNCACLAKREAVDAATSPNEYFQHLTKSHPVLKKIFTPLDLSSID ILSGRAPAFTQKNPPNWPNSYWIGDTLASLYPAIGSGFAHSVDSAIQAVQFYLKQQPKLYRTNYSKSIKTKVLLGNVFNT ALLHPKVGQLALPLLKRSPKLVNLVLKKLDYV
Sequences:
>Translated_352_residues MEEVVIIGGGVAGLSCLNALLDQGISALLIEGSTIGTPKMCGEFLAPIAAQQLQRWDVDPLIPIPHAAFYAGIRQLDIHF TKPSAAISRSDVELKLAARARRLGGRIRENTSLEHTTPATERTPFYFKLSTGEIIEAKSAFFATGKFGNNKDNKKIALPY FGFKLHFSHTENDQSLKMFSLDKAYLGIVPITETISNCACLAKREAVDAATSPNEYFQHLTKSHPVLKKIFTPLDLSSID ILSGRAPAFTQKNPPNWPNSYWIGDTLASLYPAIGSGFAHSVDSAIQAVQFYLKQQPKLYRTNYSKSIKTKVLLGNVFNT ALLHPKVGQLALPLLKRSPKLVNLVLKKLDYV >Mature_352_residues MEEVVIIGGGVAGLSCLNALLDQGISALLIEGSTIGTPKMCGEFLAPIAAQQLQRWDVDPLIPIPHAAFYAGIRQLDIHF TKPSAAISRSDVELKLAARARRLGGRIRENTSLEHTTPATERTPFYFKLSTGEIIEAKSAFFATGKFGNNKDNKKIALPY FGFKLHFSHTENDQSLKMFSLDKAYLGIVPITETISNCACLAKREAVDAATSPNEYFQHLTKSHPVLKKIFTPLDLSSID ILSGRAPAFTQKNPPNWPNSYWIGDTLASLYPAIGSGFAHSVDSAIQAVQFYLKQQPKLYRTNYSKSIKTKVLLGNVFNT ALLHPKVGQLALPLLKRSPKLVNLVLKKLDYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38712; Mature: 38712
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEVVIIGGGVAGLSCLNALLDQGISALLIEGSTIGTPKMCGEFLAPIAAQQLQRWDVDP CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC LIPIPHAAFYAGIRQLDIHFTKPSAAISRSDVELKLAARARRLGGRIRENTSLEHTTPAT CCCCCHHHHHHCHHEEEEEEECCCHHHCCCCCEEHHHHHHHHHCCHHHCCCCCCCCCCCC ERTPFYFKLSTGEIIEAKSAFFATGKFGNNKDNKKIALPYFGFKLHFSHTENDQSLKMFS CCCCEEEEECCCCEEECCCCEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEE LDKAYLGIVPITETISNCACLAKREAVDAATSPNEYFQHLTKSHPVLKKIFTPLDLSSID CCCHHEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCC ILSGRAPAFTQKNPPNWPNSYWIGDTLASLYPAIGSGFAHSVDSAIQAVQFYLKQQPKLY EECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEE RTNYSKSIKTKVLLGNVFNTALLHPKVGQLALPLLKRSPKLVNLVLKKLDYV CCCCCCCHHHHEEEHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MEEVVIIGGGVAGLSCLNALLDQGISALLIEGSTIGTPKMCGEFLAPIAAQQLQRWDVDP CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC LIPIPHAAFYAGIRQLDIHFTKPSAAISRSDVELKLAARARRLGGRIRENTSLEHTTPAT CCCCCHHHHHHCHHEEEEEEECCCHHHCCCCCEEHHHHHHHHHCCHHHCCCCCCCCCCCC ERTPFYFKLSTGEIIEAKSAFFATGKFGNNKDNKKIALPYFGFKLHFSHTENDQSLKMFS CCCCEEEEECCCCEEECCCCEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEE LDKAYLGIVPITETISNCACLAKREAVDAATSPNEYFQHLTKSHPVLKKIFTPLDLSSID CCCHHEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCC ILSGRAPAFTQKNPPNWPNSYWIGDTLASLYPAIGSGFAHSVDSAIQAVQFYLKQQPKLY EECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEE RTNYSKSIKTKVLLGNVFNTALLHPKVGQLALPLLKRSPKLVNLVLKKLDYV CCCCCCCHHHHEEEHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA