| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is engB
Identifier: 119943997
GI number: 119943997
Start: 264061
End: 264717
Strand: Direct
Name: engB
Synonym: Ping_0211
Alternate gene names: 119943997
Gene position: 264061-264717 (Clockwise)
Preceding gene: 119943988
Following gene: 119943998
Centisome position: 5.79
GC content: 39.88
Gene sequence:
>657_bases TTGGAATTTCAAAAAATACATTTTCAAAAAGCGCATTTCTTAATCAGTGCGCCGGATATTCGTCATTTAGATAAGCACTT ACCCCCAGAAAGTGGTATTGAAATTGCGTTTGCCGGGCGTTCAAACGCAGGTAAATCCAGTGCGCTTAACCGATTGACTC GTCAGAAAGGCTTAGCACGTACCAGTAAAACACCTGGTCGTACCCAATTAATCAATGTTTTTGAGATTGAAGAGGGCAAG CGTTTAATTGATTTGCCGGGATATGGTTTTGCTAAAGTGCCGCTCGCCATGAAGTTAAAATGGCAAAAATCTTTAGGGGA ATATTTACAGGAGCGTGAATCATTAAAAGGTTTAGTTGTTTTAATGGATATTCGTCAACCCTTTAAAGAGCTTGACCAGC AATTGATTTATTGGGCGATTGATGCTGATATTCCAGTGTTAGCTTTATTAACTAAAGCTGATAAATTAAAACAGGGTGCA CGTAAAACAACCTTGTTGAAAATGCGTGAAGAAGCTAAAAACTTTGAAGGCGATGTTCAGGTAGAGCTATTTTCCTCCTT AAAAGGGATTGGTCTGGAGATGTTAGAGCAAAAAGTGACATCCTGGTACGCACAGGGCGAAACCCCAAGTACAGCATTAG ACGAGATCAGCATTTAA
Upstream 100 bases:
>100_bases TTTGGGTATATGTTTAAGCATGCTATAATCCGCCCAAACAGTAGTTTACACAAATTTAATACAAGTAACAATTTTGCTAC ATGGCATAACGAGGCATATC
Downstream 100 bases:
>100_bases GCTGTATGCCGCCATAAGCAAGCGTCTCCTTAGCCGATTACCGATAAAACATTACCTGTAAATAGTGCCGAAATATATTG GCAATACTCATTCTGATAAT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MEFQKIHFQKAHFLISAPDIRHLDKHLPPESGIEIAFAGRSNAGKSSALNRLTRQKGLARTSKTPGRTQLINVFEIEEGK RLIDLPGYGFAKVPLAMKLKWQKSLGEYLQERESLKGLVVLMDIRQPFKELDQQLIYWAIDADIPVLALLTKADKLKQGA RKTTLLKMREEAKNFEGDVQVELFSSLKGIGLEMLEQKVTSWYAQGETPSTALDEISI
Sequences:
>Translated_218_residues MEFQKIHFQKAHFLISAPDIRHLDKHLPPESGIEIAFAGRSNAGKSSALNRLTRQKGLARTSKTPGRTQLINVFEIEEGK RLIDLPGYGFAKVPLAMKLKWQKSLGEYLQERESLKGLVVLMDIRQPFKELDQQLIYWAIDADIPVLALLTKADKLKQGA RKTTLLKMREEAKNFEGDVQVELFSSLKGIGLEMLEQKVTSWYAQGETPSTALDEISI >Mature_218_residues MEFQKIHFQKAHFLISAPDIRHLDKHLPPESGIEIAFAGRSNAGKSSALNRLTRQKGLARTSKTPGRTQLINVFEIEEGK RLIDLPGYGFAKVPLAMKLKWQKSLGEYLQERESLKGLVVLMDIRQPFKELDQQLIYWAIDADIPVLALLTKADKLKQGA RKTTLLKMREEAKNFEGDVQVELFSSLKGIGLEMLEQKVTSWYAQGETPSTALDEISI
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=136, Percent_Identity=33.0882352941176, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI145693205, Length=201, Percent_Identity=65.1741293532338, Blast_Score=279, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6320543, Length=130, Percent_Identity=33.8461538461538, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_PSYIN (A1SRG3)
Other databases:
- EMBL: CP000510 - RefSeq: YP_941677.1 - ProteinModelPortal: A1SRG3 - SMR: A1SRG3 - STRING: A1SRG3 - GeneID: 4627149 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0211 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: QARFFIT - PhylomeDB: A1SRG3 - ProtClustDB: PRK00454 - BioCyc: PING357804:PING_0211-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 24619; Mature: 24619
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFQKIHFQKAHFLISAPDIRHLDKHLPPESGIEIAFAGRSNAGKSSALNRLTRQKGLAR CCCHHHHHHHHEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH TSKTPGRTQLINVFEIEEGKRLIDLPGYGFAKVPLAMKLKWQKSLGEYLQERESLKGLVV CCCCCCHHHEEEEEEECCCCEEEECCCCCHHHCCHHEEEHHHHHHHHHHHHHHHHCCEEE LMDIRQPFKELDQQLIYWAIDADIPVLALLTKADKLKQGARKTTLLKMREEAKNFEGDVQ EHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VELFSSLKGIGLEMLEQKVTSWYAQGETPSTALDEISI HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure MEFQKIHFQKAHFLISAPDIRHLDKHLPPESGIEIAFAGRSNAGKSSALNRLTRQKGLAR CCCHHHHHHHHEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH TSKTPGRTQLINVFEIEEGKRLIDLPGYGFAKVPLAMKLKWQKSLGEYLQERESLKGLVV CCCCCCHHHEEEEEEECCCCEEEECCCCCHHHCCHHEEEHHHHHHHHHHHHHHHHCCEEE LMDIRQPFKELDQQLIYWAIDADIPVLALLTKADKLKQGARKTTLLKMREEAKNFEGDVQ EHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VELFSSLKGIGLEMLEQKVTSWYAQGETPSTALDEISI HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA