| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is aroK
Identifier: 119943950
GI number: 119943950
Start: 213919
End: 214434
Strand: Direct
Name: aroK
Synonym: Ping_0163
Alternate gene names: 119943950
Gene position: 213919-214434 (Clockwise)
Preceding gene: 119943949
Following gene: 119943951
Centisome position: 4.69
GC content: 40.7
Gene sequence:
>516_bases ATGGCAGAACAACGTAATATTTTCTTAATTGGCCCAATGGGCGCCGGCAAAAGCACAATTGGTCGTCATTTAGCACAAAT GTTACACCTTGATTTTCTTGATTCTGATGCAGAGATTGAGAAAAAAACGGGTGCAGACATTGCGTGGGTTTTTGATGTAG AGGGCGAAGAGGGTTTCCGTAATCGCGAACAAAGCATGATTGATGAGCTGACACAAAAGCATGGTATCGTTTTAGCAACA GGTGGCGGAGCACTTATTCGCCCTGAAAATAGGATACATTTGTCGGCACGAGGTATTGTTGTTTACTTAAAAACCAGTGT AAATAAACAGTTAGCCCGGACATTAAAAGATAAACGCCGTCCCTTATTACAAACAGATGATCCACGAACGGTATTAGAAG CATTAGCTGAAAAACGTAATGAGTTTTATGATGAAGTAGCTGATTATACGATGGAAACAGATGAGCAAAGCGCGAAGGTT GTCGCTAGTCAAATCATTGCATTATTGGATTTCTAA
Upstream 100 bases:
>100_bases ATGGGCTTGCAATGGCTTATTAACAATTGCGATAATATACAACACTTCTCTTTTTCTAAAGGGTGTTCCCAGTAATTAAT CACTTGAGTAATAATTCAAC
Downstream 100 bases:
>100_bases TGGAAAAAATAGTTGTAGCGCTGGGTAAGCGTAGTTATCCGATATCAATTGGTGAAGGTTTATTAACTCATGCTGAGTTA TTCAAATCGGCAATCAAGGG
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAEQRNIFLIGPMGAGKSTIGRHLAQMLHLDFLDSDAEIEKKTGADIAWVFDVEGEEGFRNREQSMIDELTQKHGIVLAT GGGALIRPENRIHLSARGIVVYLKTSVNKQLARTLKDKRRPLLQTDDPRTVLEALAEKRNEFYDEVADYTMETDEQSAKV VASQIIALLDF
Sequences:
>Translated_171_residues MAEQRNIFLIGPMGAGKSTIGRHLAQMLHLDFLDSDAEIEKKTGADIAWVFDVEGEEGFRNREQSMIDELTQKHGIVLAT GGGALIRPENRIHLSARGIVVYLKTSVNKQLARTLKDKRRPLLQTDDPRTVLEALAEKRNEFYDEVADYTMETDEQSAKV VASQIIALLDF >Mature_170_residues AEQRNIFLIGPMGAGKSTIGRHLAQMLHLDFLDSDAEIEKKTGADIAWVFDVEGEEGFRNREQSMIDELTQKHGIVLATG GGALIRPENRIHLSARGIVVYLKTSVNKQLARTLKDKRRPLLQTDDPRTVLEALAEKRNEFYDEVADYTMETDEQSAKVV ASQIIALLDF
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=171, Percent_Identity=67.2514619883041, Blast_Score=241, Evalue=2e-65, Organism=Escherichia coli, GI1786587, Length=159, Percent_Identity=31.4465408805031, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_PSYIN (A1SRB6)
Other databases:
- EMBL: CP000510 - RefSeq: YP_941630.1 - ProteinModelPortal: A1SRB6 - SMR: A1SRB6 - STRING: A1SRB6 - GeneID: 4626293 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0163 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: VIYLRAN - PhylomeDB: A1SRB6 - BioCyc: PING357804:PING_0163-MONOMER - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 19183; Mature: 19052
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 36-36 BINDING 60-60 BINDING 82-82 BINDING 120-120 BINDING 139-139 BINDING 156-156
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQRNIFLIGPMGAGKSTIGRHLAQMLHLDFLDSDAEIEKKTGADIAWVFDVEGEEGFR CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCHH NREQSMIDELTQKHGIVLATGGGALIRPENRIHLSARGIVVYLKTSVNKQLARTLKDKRR HHHHHHHHHHHHHCCEEEEECCCEEECCCCEEEEEECEEEEEEECHHHHHHHHHHHHHCC PLLQTDDPRTVLEALAEKRNEFYDEVADYTMETDEQSAKVVASQIIALLDF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEQRNIFLIGPMGAGKSTIGRHLAQMLHLDFLDSDAEIEKKTGADIAWVFDVEGEEGFR CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCHH NREQSMIDELTQKHGIVLATGGGALIRPENRIHLSARGIVVYLKTSVNKQLARTLKDKRR HHHHHHHHHHHHHCCEEEEECCCEEECCCCEEEEEECEEEEEEECHHHHHHHHHHHHHCC PLLQTDDPRTVLEALAEKRNEFYDEVADYTMETDEQSAKVVASQIIALLDF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA