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The map label for this gene is pilQ [H]

Identifier: 119943949

GI number: 119943949

Start: 211679

End: 213748

Strand: Direct

Name: pilQ [H]

Synonym: Ping_0162

Alternate gene names: 119943949

Gene position: 211679-213748 (Clockwise)

Preceding gene: 119943948

Following gene: 119943950

Centisome position: 4.64

GC content: 40.48

Gene sequence:

>2070_bases
ATGAACACATCATATTTAAAAACATTATTTAATATTTTTCCGCTGGTATTCTTGCTTTATTCCCCTATTGGATCGGCTGA
ATCACAACTTGGTAAGCTCGATATTAATCCTCTAGTGGACGGTAAATTTGAATTGAGGTTTGGATTCAACGAATCTATTA
GTGGCTACCAAGATAAATTATATTATCGCCCGAACAAGTTAGTTATTGATATTAAAGACGCGAGTTCCGTTTTAGCGCTA
AACCCGATTAAAATTGAAAAAGGGGGGATTAATAATGTTGCAACCAAGAGGACAGAAGAGGGGTTGCGTTTAACTATTAC
CCTTGACACTTTAATGCCCTATCGTGTTGTACAGGAAAATAGTCTTCTTTTTGTGCGTTTTGGTCATACCGGGGCTGATA
TCGCCGGGAGCGATAAACAGGAGCTTGCTCTGGCGTCCGCAGTTGTGCAAAATTCTGGCAGCCAAACAACAAAAACTGCA
ACGGAAAAGGTTAATGCATCAGCTCTATCCTCCAATCAGACAACCCCTAAGGGTTACGTTAACAGTATTCATTCACTTGA
CTTTAAGCGTGGCTTAGAGGGACAAGGCAAATTATTAGTGTACCTTGATAACTCCAGTATAGCTGTCGACATTCGTCGTC
GTAATAATCAGTTGATCGCTGAATTTCAGAGTACTTATATACCCGACGAATTATTATATATTATGGACGTTGTTGATTTT
GCGACTGCAGTAGAAAAAGTGGAAACCTTTAAAGAAGATGGGAAAACGCGCCTTATTTTTGATATTAAAGATCAATACAA
CTATCGTTATGACCAGTTAGATACCCTGTTTATGATTGAAATCTCTGAAAAACTTCAAGATCAAAAAGAAAGTGCCTATC
AGGGAAAAGCCATCTCTTTAAACTTTCAGGATATCCCGGTGCGCACTGTGTTGCAGTTGATAGCGGATTTTAATGGTTTT
AATTTAGTCATTACTGATTCCGTCAGTGGGAATATAACCTTGCGGCTTGATGATGTGCCCTGGGAACAGGCCCTGGACAT
TATTTTAAAAGTTAAAGGACTTGGCAAGAGTCTGGACGGTAACGTATTAATGATTGCTCCTGCTGTCGAGTTAGCCGCAA
AAAAACGCGAGCAGTTAGAATCAGAAAATGCTGTGGCTAATTTAGCGCCTCTGTATTCTGAATTTATCCAAGTCAATTAT
GCTAAAGTAGCTGATATCTCTGCTATGTTATCGAGTGATAAAACCAGCTTATTGTCTGAACGTGGTGCTGTTAGTGTTGA
TAACCGTACTAATACCTTGTTAGTAAAAGATACTGCAGCTGTGATTGATGCGGTGAAAAAGATGATTCAAATATTGGATA
TACCGGTTCGCCAGGTGGTGATAGAAGCGCGTATGGTCACTGTTGATGACTCGGTGAGTGAAGAGTTAGGTGTCAAATGG
GGTATGACGTCAACAAGTAGTAGTACGGTTGATAGTTTAAATGTTAATCTTCCTGCTACCGATGCTGCTGGTACTATTGC
CTTTAAGCTCGCGAAATTTTCTAATGGTGATATCTTAGATTTAGAGCTTTCTGCATTGGAAAGCGAGAATAAAGCTGAAA
TTATTGCCAGTCCGCGGATCACCACGGCGAATCAGCAAACCGCCTATATCGAACAGGGTACAGAGATTCCTTATGTCGAG
TCCGCTTCATCCGGAGCAACCTCCGTGGCTTTCAAAAAAGCAGTATTAAGTCTTACGGTGACACCACAAATTACACCCGA
TAACAAGGTGATCTTAGATTTGGAGATCACCCAAGATACCGTGGGTGAGACAGTTTCAGCCGGTACTGGTGAAGCTGTTG
CTATTGATACGCAGAAAATTGGTACTCAGGTCTTAGTTGGTAACGGCGAAACATTGGTTTTAGGGGGTATTTATCAACAA
CGGAACTCAATAGCTGTGAGTAAAGTGCCTCTTCTGGGAGATATCCCTTATTTAGGTGCCTTATTTAGATCGACTAATGA
GGAAAACACTAAGTCCGAGTTGTTGATTTTTGTCACACCAAGAATAGTCATGCAAACTAAATTCCGATAA

Upstream 100 bases:

>100_bases
AGAGTTAGCCGTGGATCGGGATGGTTGCTGGCAAGAACGGATAACAAAAATAATGTTAAGCTCGTCCGAATAATCTTAAA
ACAGGGATGGAATAAGCGCC

Downstream 100 bases:

>100_bases
AACGCCTTTCCCAACTGTTTTTGAGCAGCAATTTATAAGCCTGAAGGTAATCTTTGGGCTTATTTTACTTATGGGCTTGC
AATGGCTTATTAACAATTGC

Product: type IV pilus secretin PilQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 689; Mature: 689

Protein sequence:

>689_residues
MNTSYLKTLFNIFPLVFLLYSPIGSAESQLGKLDINPLVDGKFELRFGFNESISGYQDKLYYRPNKLVIDIKDASSVLAL
NPIKIEKGGINNVATKRTEEGLRLTITLDTLMPYRVVQENSLLFVRFGHTGADIAGSDKQELALASAVVQNSGSQTTKTA
TEKVNASALSSNQTTPKGYVNSIHSLDFKRGLEGQGKLLVYLDNSSIAVDIRRRNNQLIAEFQSTYIPDELLYIMDVVDF
ATAVEKVETFKEDGKTRLIFDIKDQYNYRYDQLDTLFMIEISEKLQDQKESAYQGKAISLNFQDIPVRTVLQLIADFNGF
NLVITDSVSGNITLRLDDVPWEQALDIILKVKGLGKSLDGNVLMIAPAVELAAKKREQLESENAVANLAPLYSEFIQVNY
AKVADISAMLSSDKTSLLSERGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDDSVSEELGVKW
GMTSTSSSTVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLELSALESENKAEIIASPRITTANQQTAYIEQGTEIPYVE
SASSGATSVAFKKAVLSLTVTPQITPDNKVILDLEITQDTVGETVSAGTGEAVAIDTQKIGTQVLVGNGETLVLGGIYQQ
RNSIAVSKVPLLGDIPYLGALFRSTNEENTKSELLIFVTPRIVMQTKFR

Sequences:

>Translated_689_residues
MNTSYLKTLFNIFPLVFLLYSPIGSAESQLGKLDINPLVDGKFELRFGFNESISGYQDKLYYRPNKLVIDIKDASSVLAL
NPIKIEKGGINNVATKRTEEGLRLTITLDTLMPYRVVQENSLLFVRFGHTGADIAGSDKQELALASAVVQNSGSQTTKTA
TEKVNASALSSNQTTPKGYVNSIHSLDFKRGLEGQGKLLVYLDNSSIAVDIRRRNNQLIAEFQSTYIPDELLYIMDVVDF
ATAVEKVETFKEDGKTRLIFDIKDQYNYRYDQLDTLFMIEISEKLQDQKESAYQGKAISLNFQDIPVRTVLQLIADFNGF
NLVITDSVSGNITLRLDDVPWEQALDIILKVKGLGKSLDGNVLMIAPAVELAAKKREQLESENAVANLAPLYSEFIQVNY
AKVADISAMLSSDKTSLLSERGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDDSVSEELGVKW
GMTSTSSSTVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLELSALESENKAEIIASPRITTANQQTAYIEQGTEIPYVE
SASSGATSVAFKKAVLSLTVTPQITPDNKVILDLEITQDTVGETVSAGTGEAVAIDTQKIGTQVLVGNGETLVLGGIYQQ
RNSIAVSKVPLLGDIPYLGALFRSTNEENTKSELLIFVTPRIVMQTKFR
>Mature_689_residues
MNTSYLKTLFNIFPLVFLLYSPIGSAESQLGKLDINPLVDGKFELRFGFNESISGYQDKLYYRPNKLVIDIKDASSVLAL
NPIKIEKGGINNVATKRTEEGLRLTITLDTLMPYRVVQENSLLFVRFGHTGADIAGSDKQELALASAVVQNSGSQTTKTA
TEKVNASALSSNQTTPKGYVNSIHSLDFKRGLEGQGKLLVYLDNSSIAVDIRRRNNQLIAEFQSTYIPDELLYIMDVVDF
ATAVEKVETFKEDGKTRLIFDIKDQYNYRYDQLDTLFMIEISEKLQDQKESAYQGKAISLNFQDIPVRTVLQLIADFNGF
NLVITDSVSGNITLRLDDVPWEQALDIILKVKGLGKSLDGNVLMIAPAVELAAKKREQLESENAVANLAPLYSEFIQVNY
AKVADISAMLSSDKTSLLSERGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDDSVSEELGVKW
GMTSTSSSTVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLELSALESENKAEIIASPRITTANQQTAYIEQGTEIPYVE
SASSGATSVAFKKAVLSLTVTPQITPDNKVILDLEITQDTVGETVSAGTGEAVAIDTQKIGTQVLVGNGETLVLGGIYQQ
RNSIAVSKVPLLGDIPYLGALFRSTNEENTKSELLIFVTPRIVMQTKFR

Specific function: Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a "porthole" allowing passage of the fimbrae through the outer membrane [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=398, Percent_Identity=40.7035175879397, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI87082242, Length=325, Percent_Identity=31.0769230769231, Blast_Score=124, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR013355
- InterPro:   IPR011662
- InterPro:   IPR004846
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N; PF07660 STN [H]

EC number: NA

Molecular weight: Translated: 75382; Mature: 75382

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00875 T2SP_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSYLKTLFNIFPLVFLLYSPIGSAESQLGKLDINPLVDGKFELRFGFNESISGYQDKL
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCCCCCEEEEEECCCCCCCCCCCEE
YYRPNKLVIDIKDASSVLALNPIKIEKGGINNVATKRTEEGLRLTITLDTLMPYRVVQEN
EECCCEEEEEEECCCCEEEECCEEEECCCCCCHHHCCCCCCCEEEEEECCCCCEEEEECC
SLLFVRFGHTGADIAGSDKQELALASAVVQNSGSQTTKTATEKVNASALSSNQTTPKGYV
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCHHH
NSIHSLDFKRGLEGQGKLLVYLDNSSIAVDIRRRNNQLIAEFQSTYIPDELLYIMDVVDF
HHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH
ATAVEKVETFKEDGKTRLIFDIKDQYNYRYDQLDTLFMIEISEKLQDQKESAYQGKAISL
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCEEEE
NFQDIPVRTVLQLIADFNGFNLVITDSVSGNITLRLDDVPWEQALDIILKVKGLGKSLDG
ECCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHEEEECCCCCCCC
NVLMIAPAVELAAKKREQLESENAVANLAPLYSEFIQVNYAKVADISAMLSSDKTSLLSE
CEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH
RGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDDSVSEELGVKW
CCCEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHEEEHEEEEECCCCHHHHCCEE
GMTSTSSSTVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLELSALESENKAEIIASPRI
CCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEHHCCCCCCEEEEECCCE
TTANQQTAYIEQGTEIPYVESASSGATSVAFKKAVLSLTVTPQITPDNKVILDLEITQDT
ECCCCCEEEEECCCCCCEEECCCCCCHHHHEEEEEEEEEECCEECCCCEEEEEEEECCHH
VGETVSAGTGEAVAIDTQKIGTQVLVGNGETLVLGGIYQQRNSIAVSKVPLLGDIPYLGA
HCCCCCCCCCCEEEEEHHHCCCEEEEECCCEEEEECHHHCCCCEEEEECCCCCCCHHHHH
LFRSTNEENTKSELLIFVTPRIVMQTKFR
HHHCCCCCCCCCCEEEEECCCEEEEECCC
>Mature Secondary Structure
MNTSYLKTLFNIFPLVFLLYSPIGSAESQLGKLDINPLVDGKFELRFGFNESISGYQDKL
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEECCCCCCCEEEEEECCCCCCCCCCCEE
YYRPNKLVIDIKDASSVLALNPIKIEKGGINNVATKRTEEGLRLTITLDTLMPYRVVQEN
EECCCEEEEEEECCCCEEEECCEEEECCCCCCHHHCCCCCCCEEEEEECCCCCEEEEECC
SLLFVRFGHTGADIAGSDKQELALASAVVQNSGSQTTKTATEKVNASALSSNQTTPKGYV
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCHHH
NSIHSLDFKRGLEGQGKLLVYLDNSSIAVDIRRRNNQLIAEFQSTYIPDELLYIMDVVDF
HHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH
ATAVEKVETFKEDGKTRLIFDIKDQYNYRYDQLDTLFMIEISEKLQDQKESAYQGKAISL
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCEEEE
NFQDIPVRTVLQLIADFNGFNLVITDSVSGNITLRLDDVPWEQALDIILKVKGLGKSLDG
ECCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHEEEECCCCCCCC
NVLMIAPAVELAAKKREQLESENAVANLAPLYSEFIQVNYAKVADISAMLSSDKTSLLSE
CEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH
RGAVSVDNRTNTLLVKDTAAVIDAVKKMIQILDIPVRQVVIEARMVTVDDSVSEELGVKW
CCCEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHEEEHEEEEECCCCHHHHCCEE
GMTSTSSSTVDSLNVNLPATDAAGTIAFKLAKFSNGDILDLELSALESENKAEIIASPRI
CCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEHHCCCCCCEEEEECCCE
TTANQQTAYIEQGTEIPYVESASSGATSVAFKKAVLSLTVTPQITPDNKVILDLEITQDT
ECCCCCEEEEECCCCCCEEECCCCCCHHHHEEEEEEEEEECCEECCCCEEEEEEEECCHH
VGETVSAGTGEAVAIDTQKIGTQVLVGNGETLVLGGIYQQRNSIAVSKVPLLGDIPYLGA
HCCCCCCCCCCEEEEEHHHCCCEEEEECCCEEEEECHHHCCCCEEEEECCCCCCCHHHHH
LFRSTNEENTKSELLIFVTPRIVMQTKFR
HHHCCCCCCCCCCEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7901733; 10984043 [H]