| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943942
Identifier: 119943942
GI number: 119943942
Start: 203882
End: 205105
Strand: Reverse
Name: 119943942
Synonym: Ping_0155
Alternate gene names: NA
Gene position: 205105-203882 (Counterclockwise)
Preceding gene: 119943944
Following gene: 119943941
Centisome position: 4.5
GC content: 36.44
Gene sequence:
>1224_bases ATGTTGAGTTTTAGTTCTATACATCATGGTTGCAAGTTATTTACTAAAGACGATCTTAGCCCTATCGTATTGCCTTGCTT TTTCTCTAATTTTTTAACTAAAAATTTAATTGTTTATGCGATAAATAAGAATAATATTCTTATTGAAAATCAAATTGAAA AAACCACATCCACATCTATTTTAAATAGACTAGAACAGTTTTTACATTGGCTAGAGTTCTATTCCAATCAGAGTGAATTT GTTTCTATAGAGACCCATCAAAACCTACCTAGCGAATTGCTGAATAACTATGTTAACAACATCCTTATTGAGGAAAATAG CCTAGGCGAAGCATCTGTAAAACAGAGTATTCAAGCATTAACTTCATACTATAATTACCTCTATCACACAGGGATTATTC CTTATCCCAAAGTCTTACGCATTAGGCCTGCGCTTCGAAATACAGCTCGTTCCAACACCAAAAAACGCACTAGTGTTAAA TATTTCACGCCAGAATTACGCAATATCCTTTATCACAATACAGAGTCTATTCGTGATGAATTATTATTACGTACAGGAGG GGAATGCGGTTTACGATCTAAAGAAAACCAAGGCTTCTTATTAAATGATTTCCGCATAGGAACTAAAACGCATAAAGGAT TACTTTCCCTGTTTGAAGATATGGAAGATAACCCAGAGAAATCCGAATTTGAATATTATTTGCAAGGGCGTTTCTCAAAG GCAAAACGACACAGCGGCGGAAGCTCTCGCAAAGTATATATACACAGCGATTTACTCAGGAGATTTAAAGAATATTACGA AATGGAGCGCCCTGAATCCGATAGTGATAGTTTTTTCTTAAACGACTCCAATTCCACACGCGCCAAACCTATCGCAGCCG CACGAGCCACTAAGATATTTAACATTGTGCGTAACAAAGTAATGTTAATCCAAGAAAAAGGATTGTTACCAGCTTATGGC CAGCTTCTAGAAAAAGGGCATACTCATCATATTTTGAGACATAGCTTTGCTACTGATAAGTTTTATTTTTTCTCAAAGCA GTGGAATATCGCCATTGATAATGTGACTACAACATCTCAAGTATACCTTGCCGTAGCGGCTCTACTGGGACACAGTGGGT CGAGTAAATCAGCCCCTACAACGACAAAAAACTATATTCGTAGCTGTCATATAAAAGAAAGCTTTGAAGCAAGCGAGGAA ATAAATGACTACAGATATGGATGA
Upstream 100 bases:
>100_bases ATCGAGCAAAAGTTACCCCACATATTTATAGTTAAAATCGTATTGACTTAATTATGTTCTACAACTATTCTTTAACCTAA GAAAAATAAATAGGTTTTGT
Downstream 100 bases:
>100_bases CACCACTAGGTCCGATGAAAACGATATAAAGTCCCAACAAATTATTACAGAGTGGAATAATAACCAAGGTGTCATTAGGC CTCTATTTATCCCAGAAAGC
Product: phage integrase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MLSFSSIHHGCKLFTKDDLSPIVLPCFFSNFLTKNLIVYAINKNNILIENQIEKTTSTSILNRLEQFLHWLEFYSNQSEF VSIETHQNLPSELLNNYVNNILIEENSLGEASVKQSIQALTSYYNYLYHTGIIPYPKVLRIRPALRNTARSNTKKRTSVK YFTPELRNILYHNTESIRDELLLRTGGECGLRSKENQGFLLNDFRIGTKTHKGLLSLFEDMEDNPEKSEFEYYLQGRFSK AKRHSGGSSRKVYIHSDLLRRFKEYYEMERPESDSDSFFLNDSNSTRAKPIAAARATKIFNIVRNKVMLIQEKGLLPAYG QLLEKGHTHHILRHSFATDKFYFFSKQWNIAIDNVTTTSQVYLAVAALLGHSGSSKSAPTTTKNYIRSCHIKESFEASEE INDYRYG
Sequences:
>Translated_407_residues MLSFSSIHHGCKLFTKDDLSPIVLPCFFSNFLTKNLIVYAINKNNILIENQIEKTTSTSILNRLEQFLHWLEFYSNQSEF VSIETHQNLPSELLNNYVNNILIEENSLGEASVKQSIQALTSYYNYLYHTGIIPYPKVLRIRPALRNTARSNTKKRTSVK YFTPELRNILYHNTESIRDELLLRTGGECGLRSKENQGFLLNDFRIGTKTHKGLLSLFEDMEDNPEKSEFEYYLQGRFSK AKRHSGGSSRKVYIHSDLLRRFKEYYEMERPESDSDSFFLNDSNSTRAKPIAAARATKIFNIVRNKVMLIQEKGLLPAYG QLLEKGHTHHILRHSFATDKFYFFSKQWNIAIDNVTTTSQVYLAVAALLGHSGSSKSAPTTTKNYIRSCHIKESFEASEE INDYRYG >Mature_407_residues MLSFSSIHHGCKLFTKDDLSPIVLPCFFSNFLTKNLIVYAINKNNILIENQIEKTTSTSILNRLEQFLHWLEFYSNQSEF VSIETHQNLPSELLNNYVNNILIEENSLGEASVKQSIQALTSYYNYLYHTGIIPYPKVLRIRPALRNTARSNTKKRTSVK YFTPELRNILYHNTESIRDELLLRTGGECGLRSKENQGFLLNDFRIGTKTHKGLLSLFEDMEDNPEKSEFEYYLQGRFSK AKRHSGGSSRKVYIHSDLLRRFKEYYEMERPESDSDSFFLNDSNSTRAKPIAAARATKIFNIVRNKVMLIQEKGLLPAYG QLLEKGHTHHILRHSFATDKFYFFSKQWNIAIDNVTTTSQVYLAVAALLGHSGSSKSAPTTTKNYIRSCHIKESFEASEE INDYRYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47000; Mature: 47000
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFSSIHHGCKLFTKDDLSPIVLPCFFSNFLTKNLIVYAINKNNILIENQIEKTTSTSI CCCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEECCHHHHHHHHH LNRLEQFLHWLEFYSNQSEFVSIETHQNLPSELLNNYVNNILIEENSLGEASVKQSIQAL HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCEEEECCCCCHHHHHHHHHHH TSYYNYLYHTGIIPYPKVLRIRPALRNTARSNTKKRTSVKYFTPELRNILYHNTESIRDE HHHHHHHHHCCCCCCCHHHEECHHHHHHHHCCCCHHCEEEEECHHHHHHHHCCHHHHHHH LLLRTGGECGLRSKENQGFLLNDFRIGTKTHKGLLSLFEDMEDNPEKSEFEYYLQGRFSK HHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AKRHSGGSSRKVYIHSDLLRRFKEYYEMERPESDSDSFFLNDSNSTRAKPIAAARATKIF HHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHH NIVRNKVMLIQEKGLLPAYGQLLEKGHTHHILRHSFATDKFYFFSKQWNIAIDNVTTTSQ HHHHHHEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCEEEECCCCCHHH VYLAVAALLGHSGSSKSAPTTTKNYIRSCHIKESFEASEEINDYRYG HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MLSFSSIHHGCKLFTKDDLSPIVLPCFFSNFLTKNLIVYAINKNNILIENQIEKTTSTSI CCCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEECCHHHHHHHHH LNRLEQFLHWLEFYSNQSEFVSIETHQNLPSELLNNYVNNILIEENSLGEASVKQSIQAL HHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCEEEECCCCCHHHHHHHHHHH TSYYNYLYHTGIIPYPKVLRIRPALRNTARSNTKKRTSVKYFTPELRNILYHNTESIRDE HHHHHHHHHCCCCCCCHHHEECHHHHHHHHCCCCHHCEEEEECHHHHHHHHCCHHHHHHH LLLRTGGECGLRSKENQGFLLNDFRIGTKTHKGLLSLFEDMEDNPEKSEFEYYLQGRFSK HHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AKRHSGGSSRKVYIHSDLLRRFKEYYEMERPESDSDSFFLNDSNSTRAKPIAAARATKIF HHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHH NIVRNKVMLIQEKGLLPAYGQLLEKGHTHHILRHSFATDKFYFFSKQWNIAIDNVTTTSQ HHHHHHEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCEEEECCCCCHHH VYLAVAALLGHSGSSKSAPTTTKNYIRSCHIKESFEASEEINDYRYG HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA