Click here to switch to the map view.

The map label for this gene is insI1 [C]

Identifier: 119943930

GI number: 119943930

Start: 186414

End: 187397

Strand: Reverse

Name: insI1 [C]

Synonym: Ping_0141

Alternate gene names: 119943930

Gene position: 187397-186414 (Counterclockwise)

Preceding gene: 119943933

Following gene: 119943924

Centisome position: 4.11

GC content: 36.79

Gene sequence:

>984_bases
ATGGGACAAAAATATTCACACCTATCCTTGCATGAAAGAAAGTTAATTTTTAATTGGTTTCATTACAGAAAAATGTCAAT
TCGAAAGATTGGAGATTTATTAAGCAGATCTCATACGACAATAAGCAGGGAAGTCAAAAGAAATGAATCGCAGTATTATG
TGCCTACTTATTACCCTCATTCAGCTCAGCGTTACTATGCAATGAGAATGCGTAGAAGAGTAACTAAAGGGAGGTTAAGC
AATGAAGGAACGAAACAGTATGTGATTAATAAGTTAAAAATAGGATGGACTCCTGAGCTTATTTCAGGCCGTTTAAAGCT
AACTGGCGAAGAGAAATATATCTGCCATGAGTCTATCTATCAATATATCTACAAAGAGGCTAAAGAGCTTATTATTTATC
TCCCTAGGAAACATAAGCGTCGTAGAATGAAATATCCAAGTCGGGCATACGTGGCTAAAACCAGTTTAAAAACCAGTATA
TTAGAGCGCCCTGAAGAAATAGATAATCGCTCAATCCCCGGCCATTGGGAAAGTGATTCTATAGAGTCGAAGGGACGAAA
GCTTGCATTGAATGTCGTGGTTGAGCGAGTAACTCGAATGTCACATATAACAAAATTAAGTTCTAAAAAAGCATTAGCCA
CAAAAAATGCACTGATAAAAAAACTGGCAAATCACCCTAATGATTTTGTTTGCTCGGTAACCTATGATAATGGTTCAGAA
AACGCCGGACACTTAAAAGTTAACGAAAAATTAGACTGTAAATCTTATTTTTGCCAAGCCTACCATAGCTGGGAAAAAGG
AGCTGTAGAGCAAGTGAATGGTTTGATTAGGCGATTTCTACCTAAAGGAACTGACTTTGCTTTAGTCTCTCATAAGCGAA
TAGGAGAGATAGAAAACATACTAAACTCAAGACCAAGAAAGTGCCTAGGTTACAAGACACCTTTTGAAATCTATAATGAA
ATATGTGGTGCACTTCCAAGTTGA

Upstream 100 bases:

>100_bases
AATAACCTCTTCTGCACTGTAGCCTGAAATGCGAGTAAACCCTTGTTCAACATAGAAGTGCACCACTTAAACTATTCTTT
AGTTAATTTGGAGGCATATT

Downstream 100 bases:

>100_bases
ATGTGGGAAAGGCCTTATTCACACGAAGAATATGTTTATTCGCATCTGTGACAAGCATACCTTCTTGAGATTCAAATATG
ATGGCGGCAATACGAAATTC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MGQKYSHLSLHERKLIFNWFHYRKMSIRKIGDLLSRSHTTISREVKRNESQYYVPTYYPHSAQRYYAMRMRRRVTKGRLS
NEGTKQYVINKLKIGWTPELISGRLKLTGEEKYICHESIYQYIYKEAKELIIYLPRKHKRRRMKYPSRAYVAKTSLKTSI
LERPEEIDNRSIPGHWESDSIESKGRKLALNVVVERVTRMSHITKLSSKKALATKNALIKKLANHPNDFVCSVTYDNGSE
NAGHLKVNEKLDCKSYFCQAYHSWEKGAVEQVNGLIRRFLPKGTDFALVSHKRIGEIENILNSRPRKCLGYKTPFEIYNE
ICGALPS

Sequences:

>Translated_327_residues
MGQKYSHLSLHERKLIFNWFHYRKMSIRKIGDLLSRSHTTISREVKRNESQYYVPTYYPHSAQRYYAMRMRRRVTKGRLS
NEGTKQYVINKLKIGWTPELISGRLKLTGEEKYICHESIYQYIYKEAKELIIYLPRKHKRRRMKYPSRAYVAKTSLKTSI
LERPEEIDNRSIPGHWESDSIESKGRKLALNVVVERVTRMSHITKLSSKKALATKNALIKKLANHPNDFVCSVTYDNGSE
NAGHLKVNEKLDCKSYFCQAYHSWEKGAVEQVNGLIRRFLPKGTDFALVSHKRIGEIENILNSRPRKCLGYKTPFEIYNE
ICGALPS
>Mature_326_residues
GQKYSHLSLHERKLIFNWFHYRKMSIRKIGDLLSRSHTTISREVKRNESQYYVPTYYPHSAQRYYAMRMRRRVTKGRLSN
EGTKQYVINKLKIGWTPELISGRLKLTGEEKYICHESIYQYIYKEAKELIIYLPRKHKRRRMKYPSRAYVAKTSLKTSIL
ERPEEIDNRSIPGHWESDSIESKGRKLALNVVVERVTRMSHITKLSSKKALATKNALIKKLANHPNDFVCSVTYDNGSEN
AGHLKVNEKLDCKSYFCQAYHSWEKGAVEQVNGLIRRFLPKGTDFALVSHKRIGEIENILNSRPRKCLGYKTPFEIYNEI
CGALPS

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=325, Percent_Identity=34.7692307692308, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1790736, Length=325, Percent_Identity=34.7692307692308, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1787671, Length=325, Percent_Identity=34.7692307692308, Blast_Score=157, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 38295; Mature: 38164

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50994 INTEGRASE ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQKYSHLSLHERKLIFNWFHYRKMSIRKIGDLLSRSHTTISREVKRNESQYYVPTYYPH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEECCC
SAQRYYAMRMRRRVTKGRLSNEGTKQYVINKLKIGWTPELISGRLKLTGEEKYICHESIY
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCEEEECCCCHHHHHHHHH
QYIYKEAKELIIYLPRKHKRRRMKYPSRAYVAKTSLKTSILERPEEIDNRSIPGHWESDS
HHHHHHHHHHEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC
IESKGRKLALNVVVERVTRMSHITKLSSKKALATKNALIKKLANHPNDFVCSVTYDNGSE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
NAGHLKVNEKLDCKSYFCQAYHSWEKGAVEQVNGLIRRFLPKGTDFALVSHKRIGEIENI
CCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHH
LNSRPRKCLGYKTPFEIYNEICGALPS
HCCCCHHHCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
GQKYSHLSLHERKLIFNWFHYRKMSIRKIGDLLSRSHTTISREVKRNESQYYVPTYYPH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEECCC
SAQRYYAMRMRRRVTKGRLSNEGTKQYVINKLKIGWTPELISGRLKLTGEEKYICHESIY
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHCCEEEECCCCHHHHHHHHH
QYIYKEAKELIIYLPRKHKRRRMKYPSRAYVAKTSLKTSILERPEEIDNRSIPGHWESDS
HHHHHHHHHHEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC
IESKGRKLALNVVVERVTRMSHITKLSSKKALATKNALIKKLANHPNDFVCSVTYDNGSE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
NAGHLKVNEKLDCKSYFCQAYHSWEKGAVEQVNGLIRRFLPKGTDFALVSHKRIGEIENI
CCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHH
LNSRPRKCLGYKTPFEIYNEICGALPS
HCCCCHHHCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]