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The map label for this gene is dctQ-4 [C]

Identifier: 119943924

GI number: 119943924

Start: 176391

End: 176882

Strand: Reverse

Name: dctQ-4 [C]

Synonym: Ping_0134

Alternate gene names: 119943924

Gene position: 176882-176391 (Counterclockwise)

Preceding gene: 119943930

Following gene: 119943923

Centisome position: 3.88

GC content: 38.82

Gene sequence:

>492_bases
ATGGGCAAAGTAATTACTTTTATAAATCGGGGGTTGGCGGCCTTTACCATATTTCTATCAACATTCTTAGTTTTTTGTGT
TATATGGCAAGTTTTTTCGCGCTATGTAATTGGCGAGCCAAGCACAGTAACAGATGAGTTAGCCCGTTATTTATTCATGT
GGGTAGCACTTATTGGTGCAGCTTACACAAGTGGTGCTAAGCGCCATTTAGCTATTGATTTGCTAACTAGAAAGTTAACC
GGGAAAAGAAAAATAATAAATGAAATAGTAATAGAAATTGCAATTTCTACATTTGCCATAGTTGTTTTAGTTTATGGCGG
CGCAGGTCTTGCCTTGAAAACACTGTCAGTAGGGCAAGTTACACCTGCACTAGGTTTGCAGATGGGGTATGTTTACTTCT
GCCTGCCCATTTCGGGCTTATTAATGGTTTTTTATTCTTTCGTTTTTGCTGGCGGCAAAATAAAAGAACTTTTCTCTACG
TCAGCGCAATAG

Upstream 100 bases:

>100_bases
CTATATTAGGCTCCTTACTTCACGGGTCATCTAGAATATTCGAGTTAACGCTTTAAATTGGTTAACCGAAAATATAAAAT
TAATAACAGGAAGATAATAA

Downstream 100 bases:

>100_bases
TTAATATATTAATTACTGAAAAACACACTAAACACTCATCGTTTGTTAATACTAAGGAATATTTTTATGGAATGGCAAAT
CATTCTTACTCTTTTTGGGA

Product: tripartite ATP-independent periplasmic (TRAP) C4-dicarboxylate transporter subunit DctQ

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ; TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transport System; Aspartate Kinase Monofunctional Class; TRAP Transporter Small Transmembrane Protein; 30S Ribosomal; Membrane Transporter; TRAP-Type C4-Dicarboxylate Transport System; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; C4-Dicarboxylate Transport System Small Permease; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; Inner Membrane Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MGKVITFINRGLAAFTIFLSTFLVFCVIWQVFSRYVIGEPSTVTDELARYLFMWVALIGAAYTSGAKRHLAIDLLTRKLT
GKRKIINEIVIEIAISTFAIVVLVYGGAGLALKTLSVGQVTPALGLQMGYVYFCLPISGLLMVFYSFVFAGGKIKELFST
SAQ

Sequences:

>Translated_163_residues
MGKVITFINRGLAAFTIFLSTFLVFCVIWQVFSRYVIGEPSTVTDELARYLFMWVALIGAAYTSGAKRHLAIDLLTRKLT
GKRKIINEIVIEIAISTFAIVVLVYGGAGLALKTLSVGQVTPALGLQMGYVYFCLPISGLLMVFYSFVFAGGKIKELFST
SAQ
>Mature_162_residues
GKVITFINRGLAAFTIFLSTFLVFCVIWQVFSRYVIGEPSTVTDELARYLFMWVALIGAAYTSGAKRHLAIDLLTRKLTG
KRKIINEIVIEIAISTFAIVVLVYGGAGLALKTLSVGQVTPALGLQMGYVYFCLPISGLLMVFYSFVFAGGKIKELFSTS
AQ

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17851; Mature: 17719

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00047 HISTONE_H4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVITFINRGLAAFTIFLSTFLVFCVIWQVFSRYVIGEPSTVTDELARYLFMWVALIGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AYTSGAKRHLAIDLLTRKLTGKRKIINEIVIEIAISTFAIVVLVYGGAGLALKTLSVGQV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
TPALGLQMGYVYFCLPISGLLMVFYSFVFAGGKIKELFSTSAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
>Mature Secondary Structure 
GKVITFINRGLAAFTIFLSTFLVFCVIWQVFSRYVIGEPSTVTDELARYLFMWVALIGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AYTSGAKRHLAIDLLTRKLTGKRKIINEIVIEIAISTFAIVVLVYGGAGLALKTLSVGQV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
TPALGLQMGYVYFCLPISGLLMVFYSFVFAGGKIKELFSTSAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA