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The map label for this gene is ycbX [H]

Identifier: 119943908

GI number: 119943908

Start: 153210

End: 154310

Strand: Reverse

Name: ycbX [H]

Synonym: Ping_0115

Alternate gene names: 119943908

Gene position: 154310-153210 (Counterclockwise)

Preceding gene: 119943909

Following gene: 119943904

Centisome position: 3.38

GC content: 40.33

Gene sequence:

>1101_bases
TTGCAAACACTTACAGATATTTATATTTATCCCATTAAATCAGTCAAAGCGATTAACCAACCTGCTGCAAAAGTTGAAAA
AGCAGGTTTAAAGTTTGATCGTCGTTATATGTTGATTGATCAACAAGGGCAATTTATTACCGGTCGAAGTTACCCGCAAC
TCACCCAAATAGAGGTGCAGTTTTCAAAAAAAACGTTAATAGTCAACGCCCCCAATATGCCATCATTAACCATTAATCCT
GCGCACTTTGGCCAGCAAACTAAAAATGCACAGCTGTGGTCTGATAATGTTAACGCACTGCATTGTCATGAGGATTACGA
CCAATGGTTTTCAGCCTTTTTGCAAAAAAAATGCCAGCTGGTCTTTTTTGCAGAAGAAACTCAGCGCTTGGTCAAAAATA
CTAACGCACCGGTTTCATTTGCCGATGGTTACCCGTTATTATTGATTAATCAAACATCCGTAGAGCAACTTAATGCGCGC
TTAACAACGCCGGTAACCGCATTACATTTTCGTCCTAATATTGTTGTCAAAGGTGATTTCCCTTTTGTTGAAGACAGCTG
GTCCCGCATTAAGATTGGAGAAGTCGAATTTGAAGTCAGTAAACCTTGCTCACGTTGTATATTTATTAATGTGGATCCTA
AAACCGGCATTGCTGACCAAAGTGAACCTTTACTAACATTATCCAAATTTCGTTATTCCCATGGAAATATCGATTTTGGG
CAAAATTTGATTCCTCTTAATGAAGGTTTGATTCGAGCAGGTGACGAGGTACAAGTGATCATTGCCCAGGGGGCCCGATT
TTATAGCGCTCAGGACGATCAACAGGAAAATAATAAAGAAACCTTAGCAATACATTATCAAGGCTCAAACGTAACCACTC
AGGGGGATAATCAACAACTATTATTAGATCAAGCGGAACAAGCAGGCATCGATATCCCGTACTCCTGCCGGGGTGGGCAA
TGTGGTAGCTGCAAGGTTAAATTAATCGAAGGTGAAGTGCAGGTGCTTAATGATGAAGGATTAAGTGAAGAAGAAATTGA
GCAGGGGTATATTCTTGCCTGCAGTTGTATCCCCACCTCAGATATTAGTATCAACCATTAA

Upstream 100 bases:

>100_bases
TTCGTTACATATTGGAAAAAGTTACACTACGCGTATTCCAGATTACCTCGGTTACATGGCTGAACGCACTGAATAACACC
CGCTTAAGAAGGCTTCTAAC

Downstream 100 bases:

>100_bases
TAATATCGAAGAAGGAAAATAAAAAAGAGCCTTTTGAAAAAGGCTCTTTTTATAATGAATTAGTAACGTTCAAATAACTT
CAATAACGTATCGCTATTAT

Product: MOSC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MQTLTDIYIYPIKSVKAINQPAAKVEKAGLKFDRRYMLIDQQGQFITGRSYPQLTQIEVQFSKKTLIVNAPNMPSLTINP
AHFGQQTKNAQLWSDNVNALHCHEDYDQWFSAFLQKKCQLVFFAEETQRLVKNTNAPVSFADGYPLLLINQTSVEQLNAR
LTTPVTALHFRPNIVVKGDFPFVEDSWSRIKIGEVEFEVSKPCSRCIFINVDPKTGIADQSEPLLTLSKFRYSHGNIDFG
QNLIPLNEGLIRAGDEVQVIIAQGARFYSAQDDQQENNKETLAIHYQGSNVTTQGDNQQLLLDQAEQAGIDIPYSCRGGQ
CGSCKVKLIEGEVQVLNDEGLSEEEIEQGYILACSCIPTSDISINH

Sequences:

>Translated_366_residues
MQTLTDIYIYPIKSVKAINQPAAKVEKAGLKFDRRYMLIDQQGQFITGRSYPQLTQIEVQFSKKTLIVNAPNMPSLTINP
AHFGQQTKNAQLWSDNVNALHCHEDYDQWFSAFLQKKCQLVFFAEETQRLVKNTNAPVSFADGYPLLLINQTSVEQLNAR
LTTPVTALHFRPNIVVKGDFPFVEDSWSRIKIGEVEFEVSKPCSRCIFINVDPKTGIADQSEPLLTLSKFRYSHGNIDFG
QNLIPLNEGLIRAGDEVQVIIAQGARFYSAQDDQQENNKETLAIHYQGSNVTTQGDNQQLLLDQAEQAGIDIPYSCRGGQ
CGSCKVKLIEGEVQVLNDEGLSEEEIEQGYILACSCIPTSDISINH
>Mature_366_residues
MQTLTDIYIYPIKSVKAINQPAAKVEKAGLKFDRRYMLIDQQGQFITGRSYPQLTQIEVQFSKKTLIVNAPNMPSLTINP
AHFGQQTKNAQLWSDNVNALHCHEDYDQWFSAFLQKKCQLVFFAEETQRLVKNTNAPVSFADGYPLLLINQTSVEQLNAR
LTTPVTALHFRPNIVVKGDFPFVEDSWSRIKIGEVEFEVSKPCSRCIFINVDPKTGIADQSEPLLTLSKFRYSHGNIDFG
QNLIPLNEGLIRAGDEVQVIIAQGARFYSAQDDQQENNKETLAIHYQGSNVTTQGDNQQLLLDQAEQAGIDIPYSCRGGQ
CGSCKVKLIEGEVQVLNDEGLSEEEIEQGYILACSCIPTSDISINH

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=286, Percent_Identity=30.7692307692308, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI31542713, Length=281, Percent_Identity=30.6049822064057, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI157388923, Length=268, Percent_Identity=27.2388059701493, Blast_Score=112, Evalue=6e-25,
Organism=Escherichia coli, GI1787179, Length=373, Percent_Identity=39.9463806970509, Blast_Score=276, Evalue=1e-75,
Organism=Escherichia coli, GI1787658, Length=103, Percent_Identity=31.0679611650485, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1787098, Length=64, Percent_Identity=40.625, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17561286, Length=286, Percent_Identity=29.020979020979, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17540702, Length=276, Percent_Identity=28.2608695652174, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71990971, Length=285, Percent_Identity=29.8245614035088, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25147498, Length=234, Percent_Identity=28.2051282051282, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI45550400, Length=286, Percent_Identity=30.0699300699301, Blast_Score=124, Evalue=9e-29,
Organism=Drosophila melanogaster, GI17647607, Length=249, Percent_Identity=27.710843373494, Blast_Score=85, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 41024; Mature: 41024

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS51156 ELM2 ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLTDIYIYPIKSVKAINQPAAKVEKAGLKFDRRYMLIDQQGQFITGRSYPQLTQIEVQ
CCCCEEEEEEECCHHHHCCCCHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCEEEEEEE
FSKKTLIVNAPNMPSLTINPAHFGQQTKNAQLWSDNVNALHCHEDYDQWFSAFLQKKCQL
ECCEEEEEECCCCCEEEECHHHCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHCCCEE
VFFAEETQRLVKNTNAPVSFADGYPLLLINQTSVEQLNARLTTPVTALHFRPNIVVKGDF
EEEEHHHHHHHHCCCCCEEECCCCCEEEEECCCHHHHCCEECCCEEEEEECCCEEEECCC
PFVEDSWSRIKIGEVEFEVSKPCSRCIFINVDPKTGIADQSEPLLTLSKFRYSHGNIDFG
CCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCC
QNLIPLNEGLIRAGDEVQVIIAQGARFYSAQDDQQENNKETLAIHYQGSNVTTQGDNQQL
CCEEECCCCEEECCCCEEEEEECCCEEECCCCCCCCCCCCEEEEEEECCEEEECCCCCEE
LLDQAEQAGIDIPYSCRGGQCGSCKVKLIEGEVQVLNDEGLSEEEIEQGYILACSCIPTS
EEECHHHCCCCCCCCCCCCCCCCEEEEEEECEEEEECCCCCCHHHHCCCEEEEEEECCCC
DISINH
CCEECC
>Mature Secondary Structure
MQTLTDIYIYPIKSVKAINQPAAKVEKAGLKFDRRYMLIDQQGQFITGRSYPQLTQIEVQ
CCCCEEEEEEECCHHHHCCCCHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCEEEEEEE
FSKKTLIVNAPNMPSLTINPAHFGQQTKNAQLWSDNVNALHCHEDYDQWFSAFLQKKCQL
ECCEEEEEECCCCCEEEECHHHCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHCCCEE
VFFAEETQRLVKNTNAPVSFADGYPLLLINQTSVEQLNARLTTPVTALHFRPNIVVKGDF
EEEEHHHHHHHHCCCCCEEECCCCCEEEEECCCHHHHCCEECCCEEEEEECCCEEEECCC
PFVEDSWSRIKIGEVEFEVSKPCSRCIFINVDPKTGIADQSEPLLTLSKFRYSHGNIDFG
CCCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCC
QNLIPLNEGLIRAGDEVQVIIAQGARFYSAQDDQQENNKETLAIHYQGSNVTTQGDNQQL
CCEEECCCCEEECCCCEEEEEECCCEEECCCCCCCCCCCCEEEEEEECCEEEECCCCCEE
LLDQAEQAGIDIPYSCRGGQCGSCKVKLIEGEVQVLNDEGLSEEEIEQGYILACSCIPTS
EEECHHHCCCCCCCCCCCCCCCCEEEEEEECEEEEECCCCCCHHHHCCCEEEEEEECCCC
DISINH
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]