| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is metA
Identifier: 119943905
GI number: 119943905
Start: 143670
End: 144587
Strand: Direct
Name: metA
Synonym: Ping_0112
Alternate gene names: 119943905
Gene position: 143670-144587 (Clockwise)
Preceding gene: 119943903
Following gene: 119943906
Centisome position: 3.15
GC content: 40.09
Gene sequence:
>918_bases ATGCCAATTCGTATTTCTGATGATCTGCCAGCTGCTGATATTTTAAGGTCAGAAAATATTTTTACTATGTCTGAATCGCG CGCTAGCCTTCAGAATATCCGTCCTTTACGTGTTTTGATTCTTAATTTGATGCCGAAAAAAATTGAAACAGAAACACAAA TAATGCGTTTGTTATCTAATACACCATTACAAGTAAATGTTGAATTAATACGAGTAGATGCCCGCGCATCACGCAACACC CCGAAAGAGCACTTAGACAAATTTTACAGTGATTTTGACCGAGTCAAAAATCAAAAGTGGGATGGTTTTGTGATTACCGG GGCACCACTAGGACAGCTTCCCTTTGAAGATGTTTACTATTGGGAAAAGTTTGTCGAAATTGTTGAATGGTCACGCCATA ATGTAACCTCAACACTCTTTTTGTGTTGGGCTGCGCAGGCTGCTTTAACCTATTTATATGGCTTAAAGAAAGAAACACGG GGAGATAAACTGTCTGGTATTTATTTACACCGTACCCATCACCATCATCACCCTCTAGTACGCGGATTTGATGATGAATT TTGGGCTCCATTATCTCGTTTTGCTGAATTTAATTCAGAGGTGGTCTCTGAAAATAGTGATTTAACTATTTTTGCAGATG CACCCAATGCGGGTATTTATTTGGCCGCCAGCCCGGATTGTCGTCAGGTTTATGTTACCGGGCACCCGGAATATGATGCG AGTACATTACATAATGAGTATTTACGCGATCTCGAAGAGGGGTTGGAGCCCAAACAGCCAGTGAATTATTATCCCGATAA TGATCAGAATAAAACACCGCGGGCAATTTGGCGAAGTCATGGAAACTTATTATACAGCAACTGGTTAAACTATTGTGTTT ATCAAGTGACACCCTATGACTTAGCCGATTTGATATAA
Upstream 100 bases:
>100_bases TAATATCATTTAGAAGGATTTTTTAGCAGTATTAATAAAATTAGTGTTAGACTTCTGGATGTCCAAATAAAAATATATTC TAATATGGGGTTTTAAAATT
Downstream 100 bases:
>100_bases CAAGCCAATAAAAAATTGCCTTGGTAAATTTTTGATTATTTCAGTGGTGGTTTAATAGCACTACCAATAATAACTTCTAC ACTTTAAATGTTAGCGGTAG
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MPIRISDDLPAADILRSENIFTMSESRASLQNIRPLRVLILNLMPKKIETETQIMRLLSNTPLQVNVELIRVDARASRNT PKEHLDKFYSDFDRVKNQKWDGFVITGAPLGQLPFEDVYYWEKFVEIVEWSRHNVTSTLFLCWAAQAALTYLYGLKKETR GDKLSGIYLHRTHHHHHPLVRGFDDEFWAPLSRFAEFNSEVVSENSDLTIFADAPNAGIYLAASPDCRQVYVTGHPEYDA STLHNEYLRDLEEGLEPKQPVNYYPDNDQNKTPRAIWRSHGNLLYSNWLNYCVYQVTPYDLADLI
Sequences:
>Translated_305_residues MPIRISDDLPAADILRSENIFTMSESRASLQNIRPLRVLILNLMPKKIETETQIMRLLSNTPLQVNVELIRVDARASRNT PKEHLDKFYSDFDRVKNQKWDGFVITGAPLGQLPFEDVYYWEKFVEIVEWSRHNVTSTLFLCWAAQAALTYLYGLKKETR GDKLSGIYLHRTHHHHHPLVRGFDDEFWAPLSRFAEFNSEVVSENSDLTIFADAPNAGIYLAASPDCRQVYVTGHPEYDA STLHNEYLRDLEEGLEPKQPVNYYPDNDQNKTPRAIWRSHGNLLYSNWLNYCVYQVTPYDLADLI >Mature_304_residues PIRISDDLPAADILRSENIFTMSESRASLQNIRPLRVLILNLMPKKIETETQIMRLLSNTPLQVNVELIRVDARASRNTP KEHLDKFYSDFDRVKNQKWDGFVITGAPLGQLPFEDVYYWEKFVEIVEWSRHNVTSTLFLCWAAQAALTYLYGLKKETRG DKLSGIYLHRTHHHHHPLVRGFDDEFWAPLSRFAEFNSEVVSENSDLTIFADAPNAGIYLAASPDCRQVYVTGHPEYDAS TLHNEYLRDLEEGLEPKQPVNYYPDNDQNKTPRAIWRSHGNLLYSNWLNYCVYQVTPYDLADLI
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family
Homologues:
Organism=Escherichia coli, GI1790443, Length=301, Percent_Identity=59.1362126245847, Blast_Score=389, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): META_PSYIN (A1SR71)
Other databases:
- EMBL: CP000510 - RefSeq: YP_941585.1 - ProteinModelPortal: A1SR71 - SMR: A1SR71 - STRING: A1SR71 - GeneID: 4626181 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0112 - eggNOG: COG1897 - HOGENOM: HBG362506 - OMA: QAGLYYH - PhylomeDB: A1SR71 - BioCyc: PING357804:PING_0112-MONOMER - GO: GO:0005737 - HAMAP: MF_00295 - InterPro: IPR005697 - PANTHER: PTHR20919 - PIRSF: PIRSF000450 - ProDom: PD037892 - TIGRFAMs: TIGR01001
Pfam domain/function: PF04204 HTS
EC number: =2.3.1.46
Molecular weight: Translated: 35393; Mature: 35262
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: ACT_SITE 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRISDDLPAADILRSENIFTMSESRASLQNIRPLRVLILNLMPKKIETETQIMRLLSN CCEEECCCCCHHHHHCCCCEEEECHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCC TPLQVNVELIRVDARASRNTPKEHLDKFYSDFDRVKNQKWDGFVITGAPLGQLPFEDVYY CCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHH WEKFVEIVEWSRHNVTSTLFLCWAAQAALTYLYGLKKETRGDKLSGIYLHRTHHHHHPLV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC RGFDDEFWAPLSRFAEFNSEVVSENSDLTIFADAPNAGIYLAASPDCRQVYVTGHPEYDA CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCH STLHNEYLRDLEEGLEPKQPVNYYPDNDQNKTPRAIWRSHGNLLYSNWLNYCVYQVTPYD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHEEEECCCHH LADLI HHHCC >Mature Secondary Structure PIRISDDLPAADILRSENIFTMSESRASLQNIRPLRVLILNLMPKKIETETQIMRLLSN CEEECCCCCHHHHHCCCCEEEECHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCC TPLQVNVELIRVDARASRNTPKEHLDKFYSDFDRVKNQKWDGFVITGAPLGQLPFEDVYY CCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHH WEKFVEIVEWSRHNVTSTLFLCWAAQAALTYLYGLKKETRGDKLSGIYLHRTHHHHHPLV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC RGFDDEFWAPLSRFAEFNSEVVSENSDLTIFADAPNAGIYLAASPDCRQVYVTGHPEYDA CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCH STLHNEYLRDLEEGLEPKQPVNYYPDNDQNKTPRAIWRSHGNLLYSNWLNYCVYQVTPYD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEHHHHHHHEEEECCCHH LADLI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA