| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is exeJ [H]
Identifier: 119943896
GI number: 119943896
Start: 135628
End: 136263
Strand: Direct
Name: exeJ [H]
Synonym: Ping_0103
Alternate gene names: 119943896
Gene position: 135628-136263 (Clockwise)
Preceding gene: 119943895
Following gene: 119943897
Centisome position: 2.97
GC content: 41.82
Gene sequence:
>636_bases TTGTCAAACCCTAATCGAACAGATAAAAAATCAATACAAGGCTTTACGCTACTGGAAGTCTTGATTGCGATCATCATTTT TGCAATGATGAGTTTGGCGGCTTATCAAGTATTGCAGGGGGTATTACGCAGTAGTGAAATAAGTAAAACACACAGCGAAC GCTTAACAGAGCTGCAACGTGCGATGCTTATTATCGAGCAGGATTTCACCCAGATAGTGGCCCGAAAATCTCGCCAGGAA GGGGTAGATAAAGAAGAGTTACGCGCGTTAACTATCGGCAAAGGGTTATTCTCTTCGCAGGATCAGGGCATAGAATTTAA CCGTCTGGGTTGGACAAATCCGTTAAATTTATTACCGCGCTCAAATATCTTAAGGGTCAGATACATACTGCAAGATGGGC AACTGCAGCGTTTGTATTTTCTTTATCCGGATACTGTTTCCGGACAACAGCCAGAAGTGCAAGTATTATTAAAGGATATC GAACAATTAAGCTTTCGTGTTTGGAGCAATGGCTGGAAAGAGAGTTGGTCACCGGCAGAAACACTGCCGCAAGGTATCGA AATTAATTTTACCAGCAAATATTTTGCGAATATCAGACGCGTTTTTTTAGTTTCATCTGGTGAGGTTATTGAGTGA
Upstream 100 bases:
>100_bases TACCAGGGGGTTGTCACCGTCGATGATAATTTTAAAGCGTTGGATATCGAAGTGAGTGATAAAAAAGACGGTAACGCGCT GGCTTACATTAGGACTTACA
Downstream 100 bases:
>100_bases TGGCTTCGTCGTATAACAAAAAGCAACGTGGTGTTGCATTAATTACAGTATTAATGATTTTAGCCATTATGGTAACCGTT GCCGCAACAATGACCGGTCG
Product: general secretion pathway protein J
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSNPNRTDKKSIQGFTLLEVLIAIIIFAMMSLAAYQVLQGVLRSSEISKTHSERLTELQRAMLIIEQDFTQIVARKSRQE GVDKEELRALTIGKGLFSSQDQGIEFNRLGWTNPLNLLPRSNILRVRYILQDGQLQRLYFLYPDTVSGQQPEVQVLLKDI EQLSFRVWSNGWKESWSPAETLPQGIEINFTSKYFANIRRVFLVSSGEVIE
Sequences:
>Translated_211_residues MSNPNRTDKKSIQGFTLLEVLIAIIIFAMMSLAAYQVLQGVLRSSEISKTHSERLTELQRAMLIIEQDFTQIVARKSRQE GVDKEELRALTIGKGLFSSQDQGIEFNRLGWTNPLNLLPRSNILRVRYILQDGQLQRLYFLYPDTVSGQQPEVQVLLKDI EQLSFRVWSNGWKESWSPAETLPQGIEINFTSKYFANIRRVFLVSSGEVIE >Mature_210_residues SNPNRTDKKSIQGFTLLEVLIAIIIFAMMSLAAYQVLQGVLRSSEISKTHSERLTELQRAMLIIEQDFTQIVARKSRQEG VDKEELRALTIGKGLFSSQDQGIEFNRLGWTNPLNLLPRSNILRVRYILQDGQLQRLYFLYPDTVSGQQPEVQVLLKDIE QLSFRVWSNGWKESWSPAETLPQGIEINFTSKYFANIRRVFLVSSGEVIE
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP J family [H]
Homologues:
Organism=Escherichia coli, GI1789728, Length=193, Percent_Identity=26.4248704663212, Blast_Score=60, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010055 - InterPro: IPR012902 - InterPro: IPR001120 [H]
Pfam domain/function: PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 24223; Mature: 24092
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPNRTDKKSIQGFTLLEVLIAIIIFAMMSLAAYQVLQGVLRSSEISKTHSERLTELQR CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLIIEQDFTQIVARKSRQEGVDKEELRALTIGKGLFSSQDQGIEFNRLGWTNPLNLLPR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCC SNILRVRYILQDGQLQRLYFLYPDTVSGQQPEVQVLLKDIEQLSFRVWSNGWKESWSPAE CCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH TLPQGIEINFTSKYFANIRRVFLVSSGEVIE HCCCCCEEEEHHHHHHHHHHHEEECCCCCCC >Mature Secondary Structure SNPNRTDKKSIQGFTLLEVLIAIIIFAMMSLAAYQVLQGVLRSSEISKTHSERLTELQR CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLIIEQDFTQIVARKSRQEGVDKEELRALTIGKGLFSSQDQGIEFNRLGWTNPLNLLPR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCC SNILRVRYILQDGQLQRLYFLYPDTVSGQQPEVQVLLKDIEQLSFRVWSNGWKESWSPAE CCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH TLPQGIEINFTSKYFANIRRVFLVSSGEVIE HCCCCCEEEEHHHHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]