| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is outI [H]
Identifier: 119943895
GI number: 119943895
Start: 135255
End: 135641
Strand: Direct
Name: outI [H]
Synonym: Ping_0102
Alternate gene names: 119943895
Gene position: 135255-135641 (Clockwise)
Preceding gene: 119943894
Following gene: 119943896
Centisome position: 2.97
GC content: 44.44
Gene sequence:
>387_bases ATGAAATCAGAACGAAACTCGGTTATGTATAAAGACAGCGGTATGACCTTACTTGAGGTTCTGCTGGCACTGGTTATTTT AGCGACAGCAGGACTCGCTGTTATGAACGCTGCTTCAGGTGCATTAAATAGCCAGGCTTATCTGCAGGATAAAACCTTTG CATTGTGGATTGCCAGCAATGGATTAGCGGAACTGAAGCTAGAGAACGAGTGGCCATCGAATACCTGGCGCTCCGATCAA GTTGATTTTGCTGGTAGTACTTGGTATTCACGTTACCAGGGGGTTGTCACCGTCGATGATAATTTTAAAGCGTTGGATAT CGAAGTGAGTGATAAAAAAGACGGTAACGCGCTGGCTTACATTAGGACTTACATTGTCAAACCCTAA
Upstream 100 bases:
>100_bases CATTGGTCTTTTCGAAGGCTGATAATGATCCTGAAAAACAATCAATAACAGTTTCCGTGAGTATGAATGGTGCGATTTCT CTCACAGAGTTGAGTAAAGA
Downstream 100 bases:
>100_bases TCGAACAGATAAAAAATCAATACAAGGCTTTACGCTACTGGAAGTCTTGATTGCGATCATCATTTTTGCAATGATGAGTT TGGCGGCTTATCAAGTATTG
Product: general secretion pathway protein I
Products: NA
Alternate protein names: Pectic enzymes secretion protein outI [H]
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKSERNSVMYKDSGMTLLEVLLALVILATAGLAVMNAASGALNSQAYLQDKTFALWIASNGLAELKLENEWPSNTWRSDQ VDFAGSTWYSRYQGVVTVDDNFKALDIEVSDKKDGNALAYIRTYIVKP
Sequences:
>Translated_128_residues MKSERNSVMYKDSGMTLLEVLLALVILATAGLAVMNAASGALNSQAYLQDKTFALWIASNGLAELKLENEWPSNTWRSDQ VDFAGSTWYSRYQGVVTVDDNFKALDIEVSDKKDGNALAYIRTYIVKP >Mature_128_residues MKSERNSVMYKDSGMTLLEVLLALVILATAGLAVMNAASGALNSQAYLQDKTFALWIASNGLAELKLENEWPSNTWRSDQ VDFAGSTWYSRYQGVVTVDDNFKALDIEVSDKKDGNALAYIRTYIVKP
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010052 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR003413 [H]
Pfam domain/function: PF02501 GSPII_IJ; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 14174; Mature: 14174
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSERNSVMYKDSGMTLLEVLLALVILATAGLAVMNAASGALNSQAYLQDKTFALWIASN CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCCEEEEEEECC GLAELKLENEWPSNTWRSDQVDFAGSTWYSRYQGVVTVDDNFKALDIEVSDKKDGNALAY CEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCEEEEEEECCCCCCCEEEE IRTYIVKP EEEEEECC >Mature Secondary Structure MKSERNSVMYKDSGMTLLEVLLALVILATAGLAVMNAASGALNSQAYLQDKTFALWIASN CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCCEEEEEEECC GLAELKLENEWPSNTWRSDQVDFAGSTWYSRYQGVVTVDDNFKALDIEVSDKKDGNALAY CEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCEEEEEEECCCCCCCEEEE IRTYIVKP EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1992458; 1429461 [H]