| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is mtlA [H]
Identifier: 119943881
GI number: 119943881
Start: 118212
End: 120098
Strand: Direct
Name: mtlA [H]
Synonym: Ping_0088
Alternate gene names: 119943881
Gene position: 118212-120098 (Clockwise)
Preceding gene: 119943878
Following gene: 119943882
Centisome position: 2.59
GC content: 40.59
Gene sequence:
>1887_bases ATGCTGTCATCACAATCCAAGATTAAAGTACAAAACTTTGGTCGCTTATTGTCAAATATGGTTATGCCAAATATTGGCGC CTTTATCGCATGGGGTTTAATTACCGCATTATTTATTCCAACGGGGTGGATACCTAACGAAACATTAGCCACCATGGTTG GGCCGATGATCAAATATATGCTGCCGCTCTTAATTGGTTATACCGGTGGTAAAATTATAGCCGGAGAGCGTGGTGCCGTT GTAGGTGCAATAGCGACAATGGGTGTGATTGTTGGTACAGATATTCCAATGTTTATGGGTGCGATGATTGTTGGTCCGTT AGGCGGCCTGGCAATTAAGAAATTTGATGCTGCCATTCACGGTAAAGTGAAAAGCGGTTTTGAAATGTTGGTTAACAACT TTTCATCCGGTATTATTGGTATGGTGCTAGCGATTATTGCTTACGTAGTGATTGGTCCTGCTGTTAAAATGTTATCGACA GCCCTTGCTGCTGGTGTTGATGTTTTAGTGGTCAATAACCTGCTTCCTTTGACTTCTATTTTTGTTGAACCGGCAAAGAT TTTGTTCCTTAATAATGCGATTAACCATGGTATTTTTACGCCGCTGGGTATTGCGCAGTCAGAGTCTCTTGGTCAATCTG TTTTCTTCTTAATTGAAGCAAACCCAGGTCCAGGTTTAGGTCTTCTTTTAGCCTACATGGTGTTCGGTAAAGGTTCTGCA AAAGAAACAGCTCCTGGTGCCGTCATTATCCACTTCTTTGGTGGTATCCATGAAATTTACTTCCCTTATGTATTGATGAA TCCGCGTCTTATCCTATCTGTTATTGCAGGTGGTATGACAGGCGTATTCGTTCTTACTCTATTCGATGCCGGTCTTATCT CTCCTGCATCTCCTGGTTCTATCTTTGCTGTTTTAGCCATGACGCCTAAAGGCGCATATATGGGTATTCTTCTATCTGTT GCTGCTGCTGCCGCTGTTTCTTTTGTTGTGGCATCTATTCTGATGAAAACACAAAAAACGGTTGCCGGTGATGAAGTTGC ACTGGAAGAAGCTGCAAACCAAATGCGCGACATGAAGCAAAGCGCTAAAGGTCAAGCAACAGGAAATGACCGCGTTGATA TGTCTGCCGTTAAAAAAATCATTGTTGCTTGTGATGCAGGTATGGGTTCAAGTGCAATGGGCGCAAGTCTATTACGCAAA AAAGTGCAAGCTGCAAATTTAAATATTGAAGTGATTAATACTGCGATCAATGATTTACCCGGTGATGTTGATATTGTTGT TACTCATAAAGATTTAACCGACAGAGCACGTAAGCATGCGCCCAATGCACAGCATATTTCATTAACTAATTTCTTAGATA ATGCGATGTATGACAATTTGGTGAAAGATCTTAAATCTGCCGGTAATGCACCTGCTGCAAATGCACCAGAAGGTGATGCA AAAAAGTCTGAAGGTCCTTTGAAATTAACCGATAAAAATATCTTCTTAGGGCTTAAACCTGCAACCAAGGAAGAGGCGAT TAAATTTGCTGGTGAGCAGTTGATTGCTTTGAATTATGTTGAGCCTGAATATCTACAGGGTATGTTTGATAGAGAAAAAT TAGTATCAACTTATTTAGGTGAATCGATAGCGGTTCCTCACGGTACTATTGAGACAAAAAAACATGTTCTTAAAACCGGT ATCGTATTTTGTCAGTACCCGGCAGGTATTCAGTGGGGTGAAGATGAAGACGATGTTGCAATTCTGGTTATTGGTATTGC AGCGCAGGGTGATCAACATATTCATGTGATCACCGCCATCACCAATGCACTTGATGATGAAGAAGCAATAGAATGTTTAA AAACAACAGTTAATAAAGAAGATGTACTGAAAATTTTAAATAACTAG
Upstream 100 bases:
>100_bases GCATATGCTTTTGAAATAATATGGTAGATTCAGTGGAGAAAGTTTAACCTCATTAATTATTTCACCCATTTTAGGTGAAG AAAGACACTCGGAGCAAATT
Downstream 100 bases:
>100_bases AAGCTTCTTAAGGTAGCTGCTTCGATTGAGGTGGCCGATTAAATATTCGAGGCTAGATTTTCTAGCCTTTTTTAATTTTA GGGAAATATTTATTATGAAA
Product: PTS system, mannitol-specific IIABC protein
Products: NA
Alternate protein names: EIICBA-Mtl; EII-Mtl; Mannitol permease IIC component; PTS system mannitol-specific EIIC component; Mannitol-specific phosphotransferase enzyme IIB component; PTS system mannitol-specific EIIB component; Mannitol-specific phosphotransferase enzyme IIA component; PTS system mannitol-specific EIIA component [H]
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MLSSQSKIKVQNFGRLLSNMVMPNIGAFIAWGLITALFIPTGWIPNETLATMVGPMIKYMLPLLIGYTGGKIIAGERGAV VGAIATMGVIVGTDIPMFMGAMIVGPLGGLAIKKFDAAIHGKVKSGFEMLVNNFSSGIIGMVLAIIAYVVIGPAVKMLST ALAAGVDVLVVNNLLPLTSIFVEPAKILFLNNAINHGIFTPLGIAQSESLGQSVFFLIEANPGPGLGLLLAYMVFGKGSA KETAPGAVIIHFFGGIHEIYFPYVLMNPRLILSVIAGGMTGVFVLTLFDAGLISPASPGSIFAVLAMTPKGAYMGILLSV AAAAAVSFVVASILMKTQKTVAGDEVALEEAANQMRDMKQSAKGQATGNDRVDMSAVKKIIVACDAGMGSSAMGASLLRK KVQAANLNIEVINTAINDLPGDVDIVVTHKDLTDRARKHAPNAQHISLTNFLDNAMYDNLVKDLKSAGNAPAANAPEGDA KKSEGPLKLTDKNIFLGLKPATKEEAIKFAGEQLIALNYVEPEYLQGMFDREKLVSTYLGESIAVPHGTIETKKHVLKTG IVFCQYPAGIQWGEDEDDVAILVIGIAAQGDQHIHVITAITNALDDEEAIECLKTTVNKEDVLKILNN
Sequences:
>Translated_628_residues MLSSQSKIKVQNFGRLLSNMVMPNIGAFIAWGLITALFIPTGWIPNETLATMVGPMIKYMLPLLIGYTGGKIIAGERGAV VGAIATMGVIVGTDIPMFMGAMIVGPLGGLAIKKFDAAIHGKVKSGFEMLVNNFSSGIIGMVLAIIAYVVIGPAVKMLST ALAAGVDVLVVNNLLPLTSIFVEPAKILFLNNAINHGIFTPLGIAQSESLGQSVFFLIEANPGPGLGLLLAYMVFGKGSA KETAPGAVIIHFFGGIHEIYFPYVLMNPRLILSVIAGGMTGVFVLTLFDAGLISPASPGSIFAVLAMTPKGAYMGILLSV AAAAAVSFVVASILMKTQKTVAGDEVALEEAANQMRDMKQSAKGQATGNDRVDMSAVKKIIVACDAGMGSSAMGASLLRK KVQAANLNIEVINTAINDLPGDVDIVVTHKDLTDRARKHAPNAQHISLTNFLDNAMYDNLVKDLKSAGNAPAANAPEGDA KKSEGPLKLTDKNIFLGLKPATKEEAIKFAGEQLIALNYVEPEYLQGMFDREKLVSTYLGESIAVPHGTIETKKHVLKTG IVFCQYPAGIQWGEDEDDVAILVIGIAAQGDQHIHVITAITNALDDEEAIECLKTTVNKEDVLKILNN >Mature_628_residues MLSSQSKIKVQNFGRLLSNMVMPNIGAFIAWGLITALFIPTGWIPNETLATMVGPMIKYMLPLLIGYTGGKIIAGERGAV VGAIATMGVIVGTDIPMFMGAMIVGPLGGLAIKKFDAAIHGKVKSGFEMLVNNFSSGIIGMVLAIIAYVVIGPAVKMLST ALAAGVDVLVVNNLLPLTSIFVEPAKILFLNNAINHGIFTPLGIAQSESLGQSVFFLIEANPGPGLGLLLAYMVFGKGSA KETAPGAVIIHFFGGIHEIYFPYVLMNPRLILSVIAGGMTGVFVLTLFDAGLISPASPGSIFAVLAMTPKGAYMGILLSV AAAAAVSFVVASILMKTQKTVAGDEVALEEAANQMRDMKQSAKGQATGNDRVDMSAVKKIIVACDAGMGSSAMGASLLRK KVQAANLNIEVINTAINDLPGDVDIVVTHKDLTDRARKHAPNAQHISLTNFLDNAMYDNLVKDLKSAGNAPAANAPEGDA KKSEGPLKLTDKNIFLGLKPATKEEAIKFAGEQLIALNYVEPEYLQGMFDREKLVSTYLGESIAVPHGTIETKKHVLKTG IVFCQYPAGIQWGEDEDDVAILVIGIAAQGDQHIHVITAITNALDDEEAIECLKTTVNKEDVLKILNN
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2213
COG function: function code G; Phosphotransferase system, mannitol-specific IIBC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790027, Length=635, Percent_Identity=66.7716535433071, Blast_Score=834, Evalue=0.0, Organism=Escherichia coli, GI1789301, Length=467, Percent_Identity=50.9635974304068, Blast_Score=483, Evalue=1e-137, Organism=Escherichia coli, GI1788494, Length=140, Percent_Identity=38.5714285714286, Blast_Score=108, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004718 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 66325; Mature: 66325
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSQSKIKVQNFGRLLSNMVMPNIGAFIAWGLITALFIPTGWIPNETLATMVGPMIKYM CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LPLLIGYTGGKIIAGERGAVVGAIATMGVIVGTDIPMFMGAMIVGPLGGLAIKKFDAAIH HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH GKVKSGFEMLVNNFSSGIIGMVLAIIAYVVIGPAVKMLSTALAAGVDVLVVNNLLPLTSI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCHHHHHHH FVEPAKILFLNNAINHGIFTPLGIAQSESLGQSVFFLIEANPGPGLGLLLAYMVFGKGSA HHCCHHEEEEECHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCC KETAPGAVIIHFFGGIHEIYFPYVLMNPRLILSVIAGGMTGVFVLTLFDAGLISPASPGS CCCCCCEEEEEHHCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC IFAVLAMTPKGAYMGILLSVAAAAAVSFVVASILMKTQKTVAGDEVALEEAANQMRDMKQ EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SAKGQATGNDRVDMSAVKKIIVACDAGMGSSAMGASLLRKKVQAANLNIEVINTAINDLP HCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHCCC GDVDIVVTHKDLTDRARKHAPNAQHISLTNFLDNAMYDNLVKDLKSAGNAPAANAPEGDA CCEEEEEECCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC KKSEGPLKLTDKNIFLGLKPATKEEAIKFAGEQLIALNYVEPEYLQGMFDREKLVSTYLG CCCCCCEEEECCCEEEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHC ESIAVPHGTIETKKHVLKTGIVFCQYPAGIQWGEDEDDVAILVIGIAAQGDQHIHVITAI CCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEHH TNALDDEEAIECLKTTVNKEDVLKILNN HHHCCHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MLSSQSKIKVQNFGRLLSNMVMPNIGAFIAWGLITALFIPTGWIPNETLATMVGPMIKYM CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LPLLIGYTGGKIIAGERGAVVGAIATMGVIVGTDIPMFMGAMIVGPLGGLAIKKFDAAIH HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH GKVKSGFEMLVNNFSSGIIGMVLAIIAYVVIGPAVKMLSTALAAGVDVLVVNNLLPLTSI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCHHHHHHH FVEPAKILFLNNAINHGIFTPLGIAQSESLGQSVFFLIEANPGPGLGLLLAYMVFGKGSA HHCCHHEEEEECHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCC KETAPGAVIIHFFGGIHEIYFPYVLMNPRLILSVIAGGMTGVFVLTLFDAGLISPASPGS CCCCCCEEEEEHHCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC IFAVLAMTPKGAYMGILLSVAAAAAVSFVVASILMKTQKTVAGDEVALEEAANQMRDMKQ EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SAKGQATGNDRVDMSAVKKIIVACDAGMGSSAMGASLLRKKVQAANLNIEVINTAINDLP HCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHCCC GDVDIVVTHKDLTDRARKHAPNAQHISLTNFLDNAMYDNLVKDLKSAGNAPAANAPEGDA CCEEEEEECCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC KKSEGPLKLTDKNIFLGLKPATKEEAIKFAGEQLIALNYVEPEYLQGMFDREKLVSTYLG CCCCCCEEEECCCEEEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHC ESIAVPHGTIETKKHVLKTGIVFCQYPAGIQWGEDEDDVAILVIGIAAQGDQHIHVITAI CCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEHH TNALDDEEAIECLKTTVNKEDVLKILNN HHHCCHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]