Click here to switch to the map view.

The map label for this gene is tal [H]

Identifier: 119943879

GI number: 119943879

Start: 115296

End: 116246

Strand: Reverse

Name: tal [H]

Synonym: Ping_0086

Alternate gene names: 119943879

Gene position: 116246-115296 (Counterclockwise)

Preceding gene: 119943880

Following gene: 119943877

Centisome position: 2.55

GC content: 39.96

Gene sequence:

>951_bases
ATGAGCAATAAATTAGATCAACTTCGTAAATTCACTACTGTAGTCGCCGATACCGGTGATGTTGAAGAAATCGCTAAATA
CCAGCCAGAGGATGCAACAACCAACCCATCTTTAATTTTAAAAGCCGCACAACTAGCAGATTATAAATACCTTATTGATT
CATCGATCGCTTATGCAAAATCCAAGAGTGCAGATAAAGCGCAACAGATTGTTGATACTTGCGACATGCTAGCAGTTAAT
ATTGGTAAAGAAATTCTTAAAATAGTACCCGGACGTATCTCTACGGAAGTCGATGCGCGTTTGTCCTATGATACTGAAAA
AAGCGTTCTTAAAGCACGACAGTTAATTAAAATGTATAACGATGCAGGTATAAAAAATGACCGAATCTTAATCAAACTCG
CTTCCACCTGGGAGGGTATCCGTGCTGGTGAAATCCTTGAAAAAGAAGGAATTAATTGTAATCTGACACTTTTATTCTCT
TTCGCTCAGGCACGCGCATGTGCAGAAGCCGAGGTTTTCCTTATCTCTCCCTTTGTTGGTCGTATTATGGATTGGTATAA
GGCCAAAGAAGGAAAAAGTTTTGCGGGCGTTGAAGATCCTGGTGTTATCTCCGTTTCTAATATTTACAACTACTACAAAG
AGCATGGTTATAAGACAGTTGTGATGGGTGCAAGCTTCCGAAATGTAGATGAAATACTGGAATTAGCCGGTTGCGATCGC
CTTACAATCAGCCCGCAATTGTTGCAGGAACTAAAAGATAGCAGCGGTGACGTTATTGAAAAACTGACGGAAGATGTATT
ACTCAAAGCATCTCCTGAAAAAATGACTCATGCTGATTTTCTGTGGCAGCATAATCAAGATCCGATGGCTGTTGAAAAAT
TAGCTGAGGGTATTCGAAACTTTGCGGTTGATCAGGGTAAGCTTGAAACCATGATTGCAGATCTTCTATAA

Upstream 100 bases:

>100_bases
TGTTCAACCTCCCAGCAGATGGCTGCATAACAATAAATCGCTATTATTGCAGTAAATCCTATTGAGTCTAGTCCAAGCAC
AATATTAAGGCAGAATAAAA

Downstream 100 bases:

>100_bases
CAGTTTTCATCATAAAGCGGCTAATAAGCCGCTTTTTTTGCCTTACATTAAGAGTAAACAGAAAATGAGTGGCTTTGGTT
CAACTTACCGTTTCACCTGA

Product: transaldolase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSNKLDQLRKFTTVVADTGDVEEIAKYQPEDATTNPSLILKAAQLADYKYLIDSSIAYAKSKSADKAQQIVDTCDMLAVN
IGKEILKIVPGRISTEVDARLSYDTEKSVLKARQLIKMYNDAGIKNDRILIKLASTWEGIRAGEILEKEGINCNLTLLFS
FAQARACAEAEVFLISPFVGRIMDWYKAKEGKSFAGVEDPGVISVSNIYNYYKEHGYKTVVMGASFRNVDEILELAGCDR
LTISPQLLQELKDSSGDVIEKLTEDVLLKASPEKMTHADFLWQHNQDPMAVEKLAEGIRNFAVDQGKLETMIADLL

Sequences:

>Translated_316_residues
MSNKLDQLRKFTTVVADTGDVEEIAKYQPEDATTNPSLILKAAQLADYKYLIDSSIAYAKSKSADKAQQIVDTCDMLAVN
IGKEILKIVPGRISTEVDARLSYDTEKSVLKARQLIKMYNDAGIKNDRILIKLASTWEGIRAGEILEKEGINCNLTLLFS
FAQARACAEAEVFLISPFVGRIMDWYKAKEGKSFAGVEDPGVISVSNIYNYYKEHGYKTVVMGASFRNVDEILELAGCDR
LTISPQLLQELKDSSGDVIEKLTEDVLLKASPEKMTHADFLWQHNQDPMAVEKLAEGIRNFAVDQGKLETMIADLL
>Mature_315_residues
SNKLDQLRKFTTVVADTGDVEEIAKYQPEDATTNPSLILKAAQLADYKYLIDSSIAYAKSKSADKAQQIVDTCDMLAVNI
GKEILKIVPGRISTEVDARLSYDTEKSVLKARQLIKMYNDAGIKNDRILIKLASTWEGIRAGEILEKEGINCNLTLLFSF
AQARACAEAEVFLISPFVGRIMDWYKAKEGKSFAGVEDPGVISVSNIYNYYKEHGYKTVVMGASFRNVDEILELAGCDRL
TISPQLLQELKDSSGDVIEKLTEDVLLKASPEKMTHADFLWQHNQDPMAVEKLAEGIRNFAVDQGKLETMIADLL

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI5803187, Length=321, Percent_Identity=57.3208722741433, Blast_Score=359, Evalue=2e-99,
Organism=Escherichia coli, GI1786189, Length=317, Percent_Identity=72.5552050473186, Blast_Score=479, Evalue=1e-137,
Organism=Escherichia coli, GI1788807, Length=312, Percent_Identity=63.7820512820513, Blast_Score=416, Evalue=1e-117,
Organism=Caenorhabditis elegans, GI25153750, Length=312, Percent_Identity=54.4871794871795, Blast_Score=326, Evalue=8e-90,
Organism=Caenorhabditis elegans, GI25153752, Length=161, Percent_Identity=52.1739130434783, Blast_Score=161, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI17570473, Length=93, Percent_Identity=46.2365591397849, Blast_Score=74, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6321480, Length=309, Percent_Identity=51.7799352750809, Blast_Score=320, Evalue=2e-88,
Organism=Saccharomyces cerevisiae, GI6323386, Length=309, Percent_Identity=55.9870550161812, Blast_Score=315, Evalue=8e-87,
Organism=Drosophila melanogaster, GI45549185, Length=316, Percent_Identity=58.8607594936709, Blast_Score=365, Evalue=1e-101,

Paralogues:

None

Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004730
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 35158; Mature: 35026

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKLDQLRKFTTVVADTGDVEEIAKYQPEDATTNPSLILKAAQLADYKYLIDSSIAYAK
CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHH
SKSADKAQQIVDTCDMLAVNIGKEILKIVPGRISTEVDARLSYDTEKSVLKARQLIKMYN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH
DAGIKNDRILIKLASTWEGIRAGEILEKEGINCNLTLLFSFAQARACAEAEVFLISPFVG
CCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEECHHHH
RIMDWYKAKEGKSFAGVEDPGVISVSNIYNYYKEHGYKTVVMGASFRNVDEILELAGCDR
HHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCC
LTISPQLLQELKDSSGDVIEKLTEDVLLKASPEKMTHADFLWQHNQDPMAVEKLAEGIRN
EEECHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
FAVDQGKLETMIADLL
HHCCCHHHHHHHHHHC
>Mature Secondary Structure 
SNKLDQLRKFTTVVADTGDVEEIAKYQPEDATTNPSLILKAAQLADYKYLIDSSIAYAK
CCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHH
SKSADKAQQIVDTCDMLAVNIGKEILKIVPGRISTEVDARLSYDTEKSVLKARQLIKMYN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH
DAGIKNDRILIKLASTWEGIRAGEILEKEGINCNLTLLFSFAQARACAEAEVFLISPFVG
CCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEECHHHH
RIMDWYKAKEGKSFAGVEDPGVISVSNIYNYYKEHGYKTVVMGASFRNVDEILELAGCDR
HHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCC
LTISPQLLQELKDSSGDVIEKLTEDVLLKASPEKMTHADFLWQHNQDPMAVEKLAEGIRN
EEECHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
FAVDQGKLETMIADLL
HHCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA