| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943862
Identifier: 119943862
GI number: 119943862
Start: 97662
End: 98561
Strand: Direct
Name: 119943862
Synonym: Ping_0069
Alternate gene names: NA
Gene position: 97662-98561 (Clockwise)
Preceding gene: 119943861
Following gene: 119943871
Centisome position: 2.14
GC content: 36.22
Gene sequence:
>900_bases ATGATTAATTTAACGGATACATTTTGTGATGTAGATGATTTTTGCAAAGCTTTTATCCCTGAGTGGGAAGCGCGTTTAAT AACCAATGGTGAGATAAAAAGACGAAGGGTTAACCGCATGAGTAAAGCCGAAATAATGACAATTATCATTAGCTTTCATC AATCTCATTACAGAGATTTTAAAAATTATTACTTAGGATATGTAGCCAAATATTTAAAACCGTATTTCCCTGCGCTACTA AGCTACACAAGGTTTATAGAGGTTATGCCATCCGTCATCATTCCTTTGAATACCTATTTAACGACCTTGTTTGGCAAGCC AACGGGGATTGCTTTTATTGACTCCACAAAAATTGCAGTATGCCATATTATTAGAGCAAAACGTAACAAGGTTTTTAACG GAACGGCCAAGCATGGGAAAGGTACAATGGGGTGGTTCTTTGGCTTCAAACTACACCTCATAGTGAATCACCTTGGCGAT ATATTGAGTGTAAAAATAACAGAAGGTAATGTAGATGATCGTAACCCAGTTCCTGACATGGTTGGCGCTTTATCAGGCAA ACTATATGGTGATAAAGGCTACTTAGGCAAAGCGTTAGCGAGTAAATTACAAGAAAAAGGTGTTGAACTGATAACAAATG TTCGAAAAAACATGAAAAAGGGAGTAATAAGCAAGTGGGATAAAGCGATGCTCAGCAAGCGTTATCTTATCGAAACAATC AATGATCAAGTAAAAAACATTTCATATGTAGAGCACACTCGACATCGCAGTATTACTGGCTTTGTTGCAAATATGTTGGG TGGTTTAATTGCCTATTGCCTACAAAAAGATAAGCCATCAATCAATTTAACACCCAATGAAAAAAATGTGATAATTGGTG AAAATATCATAATGGCTTAA
Upstream 100 bases:
>100_bases AACCTGAATTCGGGATAAGAATTAAAATAAATTGAACTTAATGCCTGTTCCACGATCTGATCTTTTAACTAAAAAAAATC AGATATAAAAAGGGACGGGC
Downstream 100 bases:
>100_bases CCCGATCTCAGGTTAGGTAATTAAACACAGATAAATCCCAGTCCTTCTTTGAAGAGCTGGGATTTTTTCGTTGAAGCGTT TGAGACGATGACTACTCGAA
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Protease; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS; LOW QUALITY PROTEIN ISPg3 Transposase
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MINLTDTFCDVDDFCKAFIPEWEARLITNGEIKRRRVNRMSKAEIMTIIISFHQSHYRDFKNYYLGYVAKYLKPYFPALL SYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFIDSTKIAVCHIIRAKRNKVFNGTAKHGKGTMGWFFGFKLHLIVNHLGD ILSVKITEGNVDDRNPVPDMVGALSGKLYGDKGYLGKALASKLQEKGVELITNVRKNMKKGVISKWDKAMLSKRYLIETI NDQVKNISYVEHTRHRSITGFVANMLGGLIAYCLQKDKPSINLTPNEKNVIIGENIIMA
Sequences:
>Translated_299_residues MINLTDTFCDVDDFCKAFIPEWEARLITNGEIKRRRVNRMSKAEIMTIIISFHQSHYRDFKNYYLGYVAKYLKPYFPALL SYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFIDSTKIAVCHIIRAKRNKVFNGTAKHGKGTMGWFFGFKLHLIVNHLGD ILSVKITEGNVDDRNPVPDMVGALSGKLYGDKGYLGKALASKLQEKGVELITNVRKNMKKGVISKWDKAMLSKRYLIETI NDQVKNISYVEHTRHRSITGFVANMLGGLIAYCLQKDKPSINLTPNEKNVIIGENIIMA >Mature_299_residues MINLTDTFCDVDDFCKAFIPEWEARLITNGEIKRRRVNRMSKAEIMTIIISFHQSHYRDFKNYYLGYVAKYLKPYFPALL SYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFIDSTKIAVCHIIRAKRNKVFNGTAKHGKGTMGWFFGFKLHLIVNHLGD ILSVKITEGNVDDRNPVPDMVGALSGKLYGDKGYLGKALASKLQEKGVELITNVRKNMKKGVISKWDKAMLSKRYLIETI NDQVKNISYVEHTRHRSITGFVANMLGGLIAYCLQKDKPSINLTPNEKNVIIGENIIMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33948; Mature: 33948
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLTDTFCDVDDFCKAFIPEWEARLITNGEIKRRRVNRMSKAEIMTIIISFHQSHYRDF CCCCCCHHCCHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNYYLGYVAKYLKPYFPALLSYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFIDSTKIAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH CHIIRAKRNKVFNGTAKHGKGTMGWFFGFKLHLIVNHLGDILSVKITEGNVDDRNPVPDM HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH VGALSGKLYGDKGYLGKALASKLQEKGVELITNVRKNMKKGVISKWDKAMLSKRYLIETI HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDQVKNISYVEHTRHRSITGFVANMLGGLIAYCLQKDKPSINLTPNEKNVIIGENIIMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEECCCEECC >Mature Secondary Structure MINLTDTFCDVDDFCKAFIPEWEARLITNGEIKRRRVNRMSKAEIMTIIISFHQSHYRDF CCCCCCHHCCHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNYYLGYVAKYLKPYFPALLSYTRFIEVMPSVIIPLNTYLTTLFGKPTGIAFIDSTKIAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHH CHIIRAKRNKVFNGTAKHGKGTMGWFFGFKLHLIVNHLGDILSVKITEGNVDDRNPVPDM HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH VGALSGKLYGDKGYLGKALASKLQEKGVELITNVRKNMKKGVISKWDKAMLSKRYLIETI HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDQVKNISYVEHTRHRSITGFVANMLGGLIAYCLQKDKPSINLTPNEKNVIIGENIIMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA