| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943821
Identifier: 119943821
GI number: 119943821
Start: 39545
End: 39958
Strand: Direct
Name: 119943821
Synonym: Ping_0027
Alternate gene names: NA
Gene position: 39545-39958 (Clockwise)
Preceding gene: 119943820
Following gene: 119943822
Centisome position: 0.87
GC content: 43.24
Gene sequence:
>414_bases ATGCCTTTTTGGACGACACAAATGTGCAGTATAAATTTTGCATTCCCCAATGTTTGTATAACCCCTATTCCTACACCTGT AGGGCCTATCCCAGTGCCTATTCCCTATCCGAGTATAGCAATAACTTGTACGGCTATTCCGTCACAGGTGAAGGTAATGG TTATGGCTATGTTCACTCACAATATGATGACCATTACGCCGATGAGTAATGGTGACAGTACCGGTGTATGGATGAATCCT TTATCCGGTATGATAATGGGACCACAAAAACAATTAATGGGCAGTATTAAGACCTTCGTTGGCGGTTTACCGGTTAACAA AATGTTAGGTTTGTCCGGGCAAAATGGCATGATGCCCGGCGCTTTTGGTCTGACCTTGAGCCCGTCACAAATTAAAGTAA TGAGCATGGTTTAA
Upstream 100 bases:
>100_bases ATCTATTCGTTCACGCGATGCAGTTATAACGGCAAGAAAAGACGTTAAAATTGACGGTGAACGAATTCATATGGGTTAAC CTTTACACTAGGAGATAATA
Downstream 100 bases:
>100_bases TAAATTAAACCCTTCTGCGGGAAAAACAGGGTGGCTTGATGCTGTTTTGCATTGGCAGCATTACTGGGCAGATGCTGCTT TTTTTTACTAGAATAGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPFWTTQMCSINFAFPNVCITPIPTPVGPIPVPIPYPSIAITCTAIPSQVKVMVMAMFTHNMMTITPMSNGDSTGVWMNP LSGMIMGPQKQLMGSIKTFVGGLPVNKMLGLSGQNGMMPGAFGLTLSPSQIKVMSMV
Sequences:
>Translated_137_residues MPFWTTQMCSINFAFPNVCITPIPTPVGPIPVPIPYPSIAITCTAIPSQVKVMVMAMFTHNMMTITPMSNGDSTGVWMNP LSGMIMGPQKQLMGSIKTFVGGLPVNKMLGLSGQNGMMPGAFGLTLSPSQIKVMSMV >Mature_136_residues PFWTTQMCSINFAFPNVCITPIPTPVGPIPVPIPYPSIAITCTAIPSQVKVMVMAMFTHNMMTITPMSNGDSTGVWMNPL SGMIMGPQKQLMGSIKTFVGGLPVNKMLGLSGQNGMMPGAFGLTLSPSQIKVMSMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14597; Mature: 14466
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 12.4 %Met (Translated Protein) 14.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 11.8 %Met (Mature Protein) 14.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFWTTQMCSINFAFPNVCITPIPTPVGPIPVPIPYPSIAITCTAIPSQVKVMVMAMFTH CCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHEEHHC NMMTITPMSNGDSTGVWMNPLSGMIMGPQKQLMGSIKTFVGGLPVNKMLGLSGQNGMMPG CEEEEEECCCCCCCCEEECCCCCEEECCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC AFGLTLSPSQIKVMSMV EECEEECCCCEEEEEEC >Mature Secondary Structure PFWTTQMCSINFAFPNVCITPIPTPVGPIPVPIPYPSIAITCTAIPSQVKVMVMAMFTH CCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHEEHHC NMMTITPMSNGDSTGVWMNPLSGMIMGPQKQLMGSIKTFVGGLPVNKMLGLSGQNGMMPG CEEEEEECCCCCCCCEEECCCCCEEECCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC AFGLTLSPSQIKVMSMV EECEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA