| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943812
Identifier: 119943812
GI number: 119943812
Start: 26407
End: 28101
Strand: Direct
Name: 119943812
Synonym: Ping_0018
Alternate gene names: NA
Gene position: 26407-28101 (Clockwise)
Preceding gene: 119943811
Following gene: 119943813
Centisome position: 0.58
GC content: 37.64
Gene sequence:
>1695_bases ATGCTTGATGTCAAAAATATTTCGTTTTTGCCAAAGCAGGGAGGGACGGTTCCTTTTAAAACATTAATCCTTGCTCCGCT TGGTGGCCATAATGCCATTGAGCAGTTGCTTGAACCAACTGAAATTAATATCCGTAATTTTGATACTGTTATTAAAGAGT TTTCACCGACTGTTGATGTAGATATAGCTAACTCTGGACTGTGCCAATTACTTAATGTCGATCAGCAAATAATCACCCTC AGTTATACTATTGATTGCTACGCAGACTTTAAACCAACAGCCATTATCAAAAAAGAACCTTCTTTACGGGAAGTTTCACA CATTATTGATCTAATACATCAACAACTTCAGCTAGATGGAACTACTTTTAGTACCGCTCCCTTTGAGCTTCAGCACGTGA AAATCGCCGAGTTGGAAAAAGAGTCGGTCAAAAGGCATGAACTTGAATTAGTTGTTTGTGAATTAGAGTTAATTCTATCT CGAATATTAAACCAAATTCTGCATCAAGCCGATTGGCAGCAGCTTGAAGCATCTTGGCGCGGTATATATTGGCTATGCCA AACAGCAGAAAGCAGTCACTCTCTGATTATTGAATGTGCCAGTGCAACTAAGCAGTTACTTTGGGATGATCTTTTCACTA ATACCGACTTACTCGATTCAAATTTATATCAGCAGGTTTACGTTGACAGTATCGGTCAATATGGCGCTGTTCCCTATGGT GTTTTATTAATTGATGATTACTTTTCTGGCGCGGGTTCAGATCTTACTTTGCTTAAAGCGATTACTGAGGTGTGCAGTAA AGCGCATTTACCTGTTGTCACGGGCGCAAATGCTCGGATGTTTGATGTTAATGACTTTAATACATTGCAGGATTCAGATT ATATTTCTGAAATTCATGCCGGACACCGATATATAAAATGGCGTAATTTTATCTCAACAGAAGAAGCTAGTTTTCTCGCT TTAACCATGCCGAGATTATTATTTAGGAATGCCTATGGTAAAGGTGATTCGGCACTCAGTTGGTTTCAAGAAAACATAGG TGATAGTCACGAAGACTGCCTATGGGGCAACGCAAGTTTTGGATTTGTTGATAATTTGCTTAAAAGCTTTCAAGAAAGCG GTTTTTGTACTTTTATTTCCGGCATGGAAGGGGGGCGATTAAATTTATCGGCGTTGTTAAATAAGTCGCCTAATTTACCC ATTGAAATTGCTTTTTCTGAAGAAAAAGAAGCCGAGTTAATAAAGTTAGGCTTTAATCCTGTCTGTACAAGGGCTTATCA CAATATATTACTTTTTGAGTCAGCAAATTCTGTGCGTTGGGGTAATCTAAAACTTAATTACCGAACACAAAATATTGATA CTATTGCCAGTGCCCAATTGCAGTATTTATTTATTGTTATGCGTATTATTCATTGTTTAAAAATCATATTCAGAGAAAGT GTTGGTGCGACGACCAACTCAACAGAGTTATCTCATATTTTAAATCGATGGATCAGACAATTTGTCTCAGATGTTGAAGC ACCTTCTAAATCGTTACGCGCACAAAGACCCTTAAAAGATGCAAAAGTCCTGGTGGTAGAAACAAATAATATAGGATGGT TTGAGATTGAAATAGAGCTCAGCCCGCATATGAAATACTTAGGCAGTACTATCTCCATTAATACCCTTATTTTTATGAAT GAAGAGGTCAGCTAA
Upstream 100 bases:
>100_bases CGTTAAATTAAATATCAAAGGTGCCGATAGGTTAAGACAAGCGTTATCTATCAAACCACCACAACCGCCTGAATCAATCG CGCAATGTTGGATGTAAAGT
Downstream 100 bases:
>100_bases TGGAATTTTCGGGTTATATGAAAATTGAAGGTGATATTCAGGGCGTTATTGAAGGCTCTTCAATTAGAAAAAATCGAGAA ACGAGTATTGATCTTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDVDIANSGLCQLLNVDQQIITL SYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDGTTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILS RILNQILHQADWQQLEASWRGIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHAGHRYIKWRNFISTEEASFLA LTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASFGFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLP IEIAFSEEKEAELIKLGFNPVCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIELSPHMKYLGSTISINTLIFMN EEVS
Sequences:
>Translated_564_residues MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDVDIANSGLCQLLNVDQQIITL SYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDGTTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILS RILNQILHQADWQQLEASWRGIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHAGHRYIKWRNFISTEEASFLA LTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASFGFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLP IEIAFSEEKEAELIKLGFNPVCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIELSPHMKYLGSTISINTLIFMN EEVS >Mature_564_residues MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDVDIANSGLCQLLNVDQQIITL SYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDGTTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILS RILNQILHQADWQQLEASWRGIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHAGHRYIKWRNFISTEEASFLA LTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASFGFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLP IEIAFSEEKEAELIKLGFNPVCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIELSPHMKYLGSTISINTLIFMN EEVS
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63698; Mature: 63698
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDV CCCCCCCCCCCCCCCCCCEEHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEE DIANSGLCQLLNVDQQIITLSYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDG EECCCCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC TTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILSRILNQILHQADWQQLEASWR CEECCCCCEEEEEEHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHC GIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG EEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEE VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHA EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHC GHRYIKWRNFISTEEASFLALTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASF CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCH GFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLPIEIAFSEEKEAELIKLGFNP HHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHCCCCCCCEEEEECCCCCCEEEEECCCH VCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES HHHHHHHCEEEEECCCCEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIEL CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCEEEEEEEEE SPHMKYLGSTISINTLIFMNEEVS CCCHHHCCCEEEEEEEEEEECCCC >Mature Secondary Structure MLDVKNISFLPKQGGTVPFKTLILAPLGGHNAIEQLLEPTEINIRNFDTVIKEFSPTVDV CCCCCCCCCCCCCCCCCCEEHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEE DIANSGLCQLLNVDQQIITLSYTIDCYADFKPTAIIKKEPSLREVSHIIDLIHQQLQLDG EECCCCHHHHHCCCCEEEEEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC TTFSTAPFELQHVKIAELEKESVKRHELELVVCELELILSRILNQILHQADWQQLEASWR CEECCCCCEEEEEEHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHC GIYWLCQTAESSHSLIIECASATKQLLWDDLFTNTDLLDSNLYQQVYVDSIGQYGAVPYG EEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEE VLLIDDYFSGAGSDLTLLKAITEVCSKAHLPVVTGANARMFDVNDFNTLQDSDYISEIHA EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCHHHHHHHHC GHRYIKWRNFISTEEASFLALTMPRLLFRNAYGKGDSALSWFQENIGDSHEDCLWGNASF CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCH GFVDNLLKSFQESGFCTFISGMEGGRLNLSALLNKSPNLPIEIAFSEEKEAELIKLGFNP HHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHCCCCCCCEEEEECCCCCCEEEEECCCH VCTRAYHNILLFESANSVRWGNLKLNYRTQNIDTIASAQLQYLFIVMRIIHCLKIIFRES HHHHHHHCEEEEECCCCEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGATTNSTELSHILNRWIRQFVSDVEAPSKSLRAQRPLKDAKVLVVETNNIGWFEIEIEL CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCEEEEEEEEE SPHMKYLGSTISINTLIFMNEEVS CCCHHHCCCEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA