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The map label for this gene is 119943809

Identifier: 119943809

GI number: 119943809

Start: 20951

End: 22315

Strand: Direct

Name: 119943809

Synonym: Ping_0015

Alternate gene names: NA

Gene position: 20951-22315 (Clockwise)

Preceding gene: 119943808

Following gene: 119943810

Centisome position: 0.46

GC content: 33.19

Gene sequence:

>1365_bases
ATGGATTCAATGAAGTCGATATATTGGAATCAGGGGCTATTTTTAAAACCTCAGCATTTTCAACAGTTAGATAGATATAC
ATCCACTATGTCTAATCTATATTCTAAAGTTCGTAGCGGCGTAGAATCAGGTATTTCAGAATTAAAATTTGATCTTTCTG
CTTTGAAAACAGGTTTATTAGTCATTGAAAAGTTGGAATGTATATTAGAAGACGGCAGTTTACTTTTATACCCGGGAAAC
TGTCAAATTCCACCATTAAGGTTAGACAAAGAGCAGTTTGATGACAGTGGGAATCTGAATATATTTATTGCTTTAGCACC
CATTTCTGCAGAGCAAAATAATTTAGTTTCAAATTCATCACCCGATGCTCGCTTTAAGCTTGCCGCTGATATCAATAAAA
AAGATCTATTTGATAATAATGAACAAGCAACGTTATCGATGTTAGATTTTAATTGTAATTTAGTTCCAAGCTATAATTTG
AAAAGTACTGCGGGTTTATCTCTTCTTAAAGTAGCTGAAATATTTTTATCGGTTGATCAATGCACACCTTCAGAAACTTT
TATTCCTAAGATAACGTTATTAAGCGGTTCTGAAGTACTTAAGAATTTAGTCAAATCAACTAAACAAAGTTTAGTCGGGC
GATTTGAACAACTTCAAAATATAACCTCTTTTGAATCAGGACTTGTAAATAGCTCAAATAATTTATCTGTCGGTTTAGCG
ATGATGTCAATTAGTAATCATATTGCCACATTTATCCAGTTTGAAGAAAATCCATCAACACAAGTCTCTGATATTTATCT
GGCTTATCGACAATTAATCTCACAATTGAGCATGTTTTCGACAGAAGTTTCAGTTATTGGTGAAACCCTTACTGAAGAAA
ATTCTATTATCCCGTTTAATCAAAATAATTTAAGCGATTGTTTTTCTAAAGTAAATAATCTGACAACTAAATTATTAAAC
GAGTTGACCGTTCAGCCTGAATTATTAGTTAATTTAATTTATCAGGGTGATTCAAAATTTGTAGCCCAATTATCGCGTGA
ATTTTTAGATCCCGGTTACCGGATTTATCTAAGAATTAGAACCAAAGAAAATGTCATTGATCATTTAGATAATATTCTTA
ATTTTCTAAAAGTTGGGGCCGATGGACAAGTTGATGTTTACTTGAAAAGAGCACTTCCGGGAGTTCAATTGTCGTATTTA
GATAAAAAACCCCAAGGAGTTGCGACTGTCCCGAATAGCTATTATTTTGGTCTTGATAGGCAGTCCTTCCAATGGCAGAA
AGTCATTGAGTTAAGCCGAATTGGTGTTATTTGGAGTGATTATATAGAAGACGTTGCTCTCGATTTGATCGCTGTTCAAG
GATAA

Upstream 100 bases:

>100_bases
CGATATTTTAAGACCCTCAAATATTAGGCTTAATATTGACTTTGGTGAAAACAGTATTACAAAGTTCAGCGCGACAGCTG
AATAATTTGGAGATTGAGTA

Downstream 100 bases:

>100_bases
GTTATGAAACTAATAGATAAATTTATTCCTGTTTTTCAAGTAATTAAACATCTACCTCAAAACATATCTGATGATTCAGA
TATAACATTAATAGATCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Type VI Secretion System Protein EvpM; Type VI Secretion System Protein; Protein ImpJ/VasE

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MDSMKSIYWNQGLFLKPQHFQQLDRYTSTMSNLYSKVRSGVESGISELKFDLSALKTGLLVIEKLECILEDGSLLLYPGN
CQIPPLRLDKEQFDDSGNLNIFIALAPISAEQNNLVSNSSPDARFKLAADINKKDLFDNNEQATLSMLDFNCNLVPSYNL
KSTAGLSLLKVAEIFLSVDQCTPSETFIPKITLLSGSEVLKNLVKSTKQSLVGRFEQLQNITSFESGLVNSSNNLSVGLA
MMSISNHIATFIQFEENPSTQVSDIYLAYRQLISQLSMFSTEVSVIGETLTEENSIIPFNQNNLSDCFSKVNNLTTKLLN
ELTVQPELLVNLIYQGDSKFVAQLSREFLDPGYRIYLRIRTKENVIDHLDNILNFLKVGADGQVDVYLKRALPGVQLSYL
DKKPQGVATVPNSYYFGLDRQSFQWQKVIELSRIGVIWSDYIEDVALDLIAVQG

Sequences:

>Translated_454_residues
MDSMKSIYWNQGLFLKPQHFQQLDRYTSTMSNLYSKVRSGVESGISELKFDLSALKTGLLVIEKLECILEDGSLLLYPGN
CQIPPLRLDKEQFDDSGNLNIFIALAPISAEQNNLVSNSSPDARFKLAADINKKDLFDNNEQATLSMLDFNCNLVPSYNL
KSTAGLSLLKVAEIFLSVDQCTPSETFIPKITLLSGSEVLKNLVKSTKQSLVGRFEQLQNITSFESGLVNSSNNLSVGLA
MMSISNHIATFIQFEENPSTQVSDIYLAYRQLISQLSMFSTEVSVIGETLTEENSIIPFNQNNLSDCFSKVNNLTTKLLN
ELTVQPELLVNLIYQGDSKFVAQLSREFLDPGYRIYLRIRTKENVIDHLDNILNFLKVGADGQVDVYLKRALPGVQLSYL
DKKPQGVATVPNSYYFGLDRQSFQWQKVIELSRIGVIWSDYIEDVALDLIAVQG
>Mature_454_residues
MDSMKSIYWNQGLFLKPQHFQQLDRYTSTMSNLYSKVRSGVESGISELKFDLSALKTGLLVIEKLECILEDGSLLLYPGN
CQIPPLRLDKEQFDDSGNLNIFIALAPISAEQNNLVSNSSPDARFKLAADINKKDLFDNNEQATLSMLDFNCNLVPSYNL
KSTAGLSLLKVAEIFLSVDQCTPSETFIPKITLLSGSEVLKNLVKSTKQSLVGRFEQLQNITSFESGLVNSSNNLSVGLA
MMSISNHIATFIQFEENPSTQVSDIYLAYRQLISQLSMFSTEVSVIGETLTEENSIIPFNQNNLSDCFSKVNNLTTKLLN
ELTVQPELLVNLIYQGDSKFVAQLSREFLDPGYRIYLRIRTKENVIDHLDNILNFLKVGADGQVDVYLKRALPGVQLSYL
DKKPQGVATVPNSYYFGLDRQSFQWQKVIELSRIGVIWSDYIEDVALDLIAVQG

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50874; Mature: 50874

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00582 RIBOSOMAL_L33

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSMKSIYWNQGLFLKPQHFQQLDRYTSTMSNLYSKVRSGVESGISELKFDLSALKTGLL
CCCCHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIEKLECILEDGSLLLYPGNCQIPPLRLDKEQFDDSGNLNIFIALAPISAEQNNLVSNSS
HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCCCCCC
PDARFKLAADINKKDLFDNNEQATLSMLDFNCNLVPSYNLKSTAGLSLLKVAEIFLSVDQ
CCCEEEEEECCCHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHC
CTPSETFIPKITLLSGSEVLKNLVKSTKQSLVGRFEQLQNITSFESGLVNSSNNLSVGLA
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH
MMSISNHIATFIQFEENPSTQVSDIYLAYRQLISQLSMFSTEVSVIGETLTEENSIIPFN
HHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
QNNLSDCFSKVNNLTTKLLNELTVQPELLVNLIYQGDSKFVAQLSREFLDPGYRIYLRIR
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEE
TKENVIDHLDNILNFLKVGADGQVDVYLKRALPGVQLSYLDKKPQGVATVPNSYYFGLDR
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCEECCCCEEECCCC
QSFQWQKVIELSRIGVIWSDYIEDVALDLIAVQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MDSMKSIYWNQGLFLKPQHFQQLDRYTSTMSNLYSKVRSGVESGISELKFDLSALKTGLL
CCCCHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIEKLECILEDGSLLLYPGNCQIPPLRLDKEQFDDSGNLNIFIALAPISAEQNNLVSNSS
HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCCCCCCC
PDARFKLAADINKKDLFDNNEQATLSMLDFNCNLVPSYNLKSTAGLSLLKVAEIFLSVDQ
CCCEEEEEECCCHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHC
CTPSETFIPKITLLSGSEVLKNLVKSTKQSLVGRFEQLQNITSFESGLVNSSNNLSVGLA
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH
MMSISNHIATFIQFEENPSTQVSDIYLAYRQLISQLSMFSTEVSVIGETLTEENSIIPFN
HHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
QNNLSDCFSKVNNLTTKLLNELTVQPELLVNLIYQGDSKFVAQLSREFLDPGYRIYLRIR
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEE
TKENVIDHLDNILNFLKVGADGQVDVYLKRALPGVQLSYLDKKPQGVATVPNSYYFGLDR
CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCEECCCCEEECCCC
QSFQWQKVIELSRIGVIWSDYIEDVALDLIAVQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA