Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119943806

Identifier: 119943806

GI number: 119943806

Start: 18217

End: 19665

Strand: Direct

Name: 119943806

Synonym: Ping_0012

Alternate gene names: NA

Gene position: 18217-19665 (Clockwise)

Preceding gene: 119943805

Following gene: 119943807

Centisome position: 0.4

GC content: 35.89

Gene sequence:

>1449_bases
ATGGAAGCAATAAAAGAAGAATCATTAGTTGGAAGTATATTAGGTTTAAGCAAGCTTTTAAGTGACCCATATAGTTATGA
TATTGCAAGTCAAGGGATGCAAACGCTGCTCACTCAGGTACTTGAAGAAGATTGTGATTTTGATAATCTAAGAGTAGATA
AACGTTATGTTGAATCTCTTATTGATGAGCTTGATGAAAAACTCAGTAAGCAAATGGATGAAATTATCCATAATAGTGTT
TTTCAAGCACTAGAATCGCCATGGAGAAGTTTAAAACTGCTAACGGATAGAACAGATTTCAAAGAAAATATAAAAATTGA
AATATTATCAGTATCCAAAAATGAGTTACTGGAAGATTTTGAAGATGCGGCTGATATAATTGAAACAGGTCTTTATCGTA
AAGTTTACACCGATGAATTCGGACAATATGGTGGTGATCCCTATGGAGTGATTATTGGAAATTATTATATTTCCCCTTCA
GTCCCCGATATGAATTTACTGAGTCATATGTCCAGTTTAAGTGCTATGACACATGCTCCATTTATAACAAGTGCAAGTGA
AGAATTTTTTGGACTGGAAGATTTTGCAGAATTACCTGAGTTAAAACAATTAGAAGCTATGTTTGAAGGCCCGCAATATT
TATCTTGGCGTAACTTTAGAAGCAGTGATGATGCCAGAAATGTCGGCCTCACTTTACCTCGATTTATGTTAAGGCGAACA
TATGGTGAAAATATTCCAGTAAGTGCTTTTAACTATAAAGAAAGTATTAACAACAAGTCAGAGTACCTATGGGGCAACGC
AGCATTTGCTTATGCAACGCGATTAAATAACAGTTTTGCAAAATATCGTTGGTGTCCAAATATCATCGGTCCGCAATCAG
GTGGTGAAGTCGCTGATTTACCTATTGATATCGTTGATGATAGCGGCACTGATAAAGTTTTTGGACCAGTAGAACTTAAA
GTGTCAGATAGGAAAGAATTTGAATTATCTGAACTTGGTTTTATTCCTTTTACACTCCGAAAAGACTCTGACAGTGCAGT
CTTTTTCTCATCTAATTCAACCCAATTGCCTAAAAAATTCACCAATGATGATGAAGGTAAACAGGCTGAAATTAATTACC
GTTTAGGTACACAACTACCTTACTTATTTATAGTAAACAGGCTGGCTCACTATATTAAGGTATTACAACGCGAAAATTTG
GGTAGTTGGAAGAGTAAAACAGAGCTAGAAACAGAGCTTAATAAATGGATCAGGCAATATGTTGCAGATCAAGATAATCC
TTCCGCAGCAACAAGAAGTCAACGACCACTCAGAAAAGCTGCAATTTCAGTCAGTGACATTGATACTGAAGTAGGTTGGT
ATTCTGTCGGTATGGAAGTGACTCCTCACTTTAAATTTATGGGAGCAAGTTTCACACTCTCTCTAACCAGTATTTTAGAA
CGAGCTTAA

Upstream 100 bases:

>100_bases
ATCTATAAAGTGTGAATGAAATTATTCTATTGCTTCTAGCCCTAAATATAAATGGCTTAGCAGATAATGACAGAACATTG
GTGCCTCTTAGGAGTAAAAA

Downstream 100 bases:

>100_bases
TCTTGTGCCATTTAAAAATATAAAGGAATAATTATGCCTACTGAAATTTATATGTCCATTAATGACCCTGAAGGGTGTTT
AACAGAAGAATCTTGTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESLIDELDEKLSKQMDEIIHNSV
FQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDFEDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPS
VPDMNLLSHMSSLSAMTHAPFITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT
YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADLPIDIVDDSGTDKVFGPVELK
VSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKFTNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENL
GSWKSKTELETELNKWIRQYVADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE
RA

Sequences:

>Translated_482_residues
MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESLIDELDEKLSKQMDEIIHNSV
FQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDFEDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPS
VPDMNLLSHMSSLSAMTHAPFITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT
YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADLPIDIVDDSGTDKVFGPVELK
VSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKFTNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENL
GSWKSKTELETELNKWIRQYVADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE
RA
>Mature_482_residues
MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESLIDELDEKLSKQMDEIIHNSV
FQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDFEDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPS
VPDMNLLSHMSSLSAMTHAPFITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT
YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADLPIDIVDDSGTDKVFGPVELK
VSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKFTNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENL
GSWKSKTELETELNKWIRQYVADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE
RA

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54816; Mature: 54816

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESL
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IDELDEKLSKQMDEIIHNSVFQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH
EDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPSVPDMNLLSHMSSLSAMTHAP
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
FITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT
CEECCCHHHCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADL
CCCCCCCEEECHHHHCCCCCCEEECCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEECC
PIDIVDDSGTDKVFGPVELKVSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKF
CEEEECCCCCCCEECCEEEEECCCCCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCHHC
TNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENLGSWKSKTELETELNKWIRQY
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE
HCCCCCCCHHHHHHCCHHHHHCCHHHCCCCCCEEEECCEECCCEEEECCHHHHHHHHHHH
RA
CC
>Mature Secondary Structure
MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESL
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IDELDEKLSKQMDEIIHNSVFQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH
EDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPSVPDMNLLSHMSSLSAMTHAP
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
FITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT
CEECCCHHHCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADL
CCCCCCCEEECHHHHCCCCCCEEECCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEECC
PIDIVDDSGTDKVFGPVELKVSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKF
CEEEECCCCCCCEECCEEEEECCCCCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCHHC
TNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENLGSWKSKTELETELNKWIRQY
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE
HCCCCCCCHHHHHHCCHHHHHCCHHHCCCCCCEEEECCEECCCEEEECCHHHHHHHHHHH
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA