| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is ssuA [C]
Identifier: 119871465
GI number: 119871465
Start: 5675920
End: 5676909
Strand: Direct
Name: ssuA [C]
Synonym: Mkms_5441
Alternate gene names: 119871465
Gene position: 5675920-5676909 (Clockwise)
Preceding gene: 119871464
Following gene: 119871466
Centisome position: 98.93
GC content: 65.76
Gene sequence:
>990_bases GTGTTCAAACACTTTTCACGCCTCGCGAGATGGGGAGCGGTCGCCTCGGCCGCCGCGGTCGTCCTGACTGCATGCGGAAG CGGTGGTGGCACCGAGCCCGCGAAGACCGACGGCGGACTCGACAAGGTCAACGTGGGGACGATCCCGGCGATCCTCAGCG CCCCGCTGTTCGTCGGCATCGAGGAGGGGATCTTCGAGAAGCACGGCCTCGAGGTGCAGGTCAACTTCGCCGACGGCGGT GCGGCCGTCATCCCGTCCGTGCTCAGCGGGGAGAACCAGTTCGGCTACTCGAACACCGTGAGCCAGCTCGCGGCGATCGA TCAGGGCCTGCCGTTGCGGCTGGTCCAGCCGGCGTGGGCGCCGTGCTGTCAGCCCGACCAGGACGACCACGGCGTACTCG TCCTGCCGGACAGCGGGATCAACGACCCGAAGGATCTGGAAGGCGCGAACATCGCGGTCAACACGTTGCAGAACATCGGC GAGGTCCACATCCGTCGCGCGATGGACAATCTGGGCGTCAACCACGAGAGCCTGACGTGGACGCAGCTGCCGTTCTCGGA CATGGGTGAGGCGCTGGAGCGCGGTGACGTCGACGCGATCTGGGTGTCGGAGCCGCACCGTACGCCGGGCCTGAACAAGG GGTGGAAGCAGATCATCGCCCCCGGGGTCCAGTCGTTCCCCGATCAGATCGGTGGGTACTACTCGACGTCGCAGCAGTTC GCCGAGTCGAACCCGGAGGTCGTCAGGAAGTTCCGCGAGGCGATGACCGAGGTGAACGGATTCGCCCAGGACAACCCGGA TCGAGTGGGTGAGGTCGCTGTCGCGGAGATGGGCATCGACGCGGCGATCATCGACCAGGTGAACTTCCCGAAGTTCCCGA CCGAGGATGACGGTCAGGCGCTGCGCAACTACGGAGCGGCCGTCGTCGAGTACGGCATCATCGACAAGGAGCCCGAAGAT TACGATGCCCTGTTCGCTGCCACGGACTGA
Upstream 100 bases:
>100_bases CGCGCATCTGCGCGCCCATGTGTTCAGCCGTATCCGCGAGATGGTCCGCAACGACGCGGCTCTCGCTTCCATCTGACAAC TGATCGATCGGAGAACATCT
Downstream 100 bases:
>100_bases GCACGTCGTGACGGTCCACCGGCCCCAGCGGCCGGTGGACCGGCAACCTAGCATGGCGCCATGACTAGAGCGCCGTCGCA AGGGGGCCGCCCGCGCCGCA
Product: nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; NlpA Lipoprotein; Thiamine Biosynthesis Protein; LOW QUALITY PROTEIN 4-Hydroxybenzoate 3-Monooxygenase; Membrane Lipoprotein Lipid Attachment Site
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MFKHFSRLARWGAVASAAAVVLTACGSGGGTEPAKTDGGLDKVNVGTIPAILSAPLFVGIEEGIFEKHGLEVQVNFADGG AAVIPSVLSGENQFGYSNTVSQLAAIDQGLPLRLVQPAWAPCCQPDQDDHGVLVLPDSGINDPKDLEGANIAVNTLQNIG EVHIRRAMDNLGVNHESLTWTQLPFSDMGEALERGDVDAIWVSEPHRTPGLNKGWKQIIAPGVQSFPDQIGGYYSTSQQF AESNPEVVRKFREAMTEVNGFAQDNPDRVGEVAVAEMGIDAAIIDQVNFPKFPTEDDGQALRNYGAAVVEYGIIDKEPED YDALFAATD
Sequences:
>Translated_329_residues MFKHFSRLARWGAVASAAAVVLTACGSGGGTEPAKTDGGLDKVNVGTIPAILSAPLFVGIEEGIFEKHGLEVQVNFADGG AAVIPSVLSGENQFGYSNTVSQLAAIDQGLPLRLVQPAWAPCCQPDQDDHGVLVLPDSGINDPKDLEGANIAVNTLQNIG EVHIRRAMDNLGVNHESLTWTQLPFSDMGEALERGDVDAIWVSEPHRTPGLNKGWKQIIAPGVQSFPDQIGGYYSTSQQF AESNPEVVRKFREAMTEVNGFAQDNPDRVGEVAVAEMGIDAAIIDQVNFPKFPTEDDGQALRNYGAAVVEYGIIDKEPED YDALFAATD >Mature_329_residues MFKHFSRLARWGAVASAAAVVLTACGSGGGTEPAKTDGGLDKVNVGTIPAILSAPLFVGIEEGIFEKHGLEVQVNFADGG AAVIPSVLSGENQFGYSNTVSQLAAIDQGLPLRLVQPAWAPCCQPDQDDHGVLVLPDSGINDPKDLEGANIAVNTLQNIG EVHIRRAMDNLGVNHESLTWTQLPFSDMGEALERGDVDAIWVSEPHRTPGLNKGWKQIIAPGVQSFPDQIGGYYSTSQQF AESNPEVVRKFREAMTEVNGFAQDNPDRVGEVAVAEMGIDAAIIDQVNFPKFPTEDDGQALRNYGAAVVEYGIIDKEPED YDALFAATD
Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35161; Mature: 35161
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKHFSRLARWGAVASAAAVVLTACGSGGGTEPAKTDGGLDKVNVGTIPAILSAPLFVGI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHCHHHEEH EEGIFEKHGLEVQVNFADGGAAVIPSVLSGENQFGYSNTVSQLAAIDQGLPLRLVQPAWA HHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCC PCCQPDQDDHGVLVLPDSGINDPKDLEGANIAVNTLQNIGEVHIRRAMDNLGVNHESLTW CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE TQLPFSDMGEALERGDVDAIWVSEPHRTPGLNKGWKQIIAPGVQSFPDQIGGYYSTSQQF EECCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHH AESNPEVVRKFREAMTEVNGFAQDNPDRVGEVAVAEMGIDAAIIDQVNFPKFPTEDDGQA HCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHH LRNYGAAVVEYGIIDKEPEDYDALFAATD HHHHCHHHHHCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MFKHFSRLARWGAVASAAAVVLTACGSGGGTEPAKTDGGLDKVNVGTIPAILSAPLFVGI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHCHHHEEH EEGIFEKHGLEVQVNFADGGAAVIPSVLSGENQFGYSNTVSQLAAIDQGLPLRLVQPAWA HHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCC PCCQPDQDDHGVLVLPDSGINDPKDLEGANIAVNTLQNIGEVHIRRAMDNLGVNHESLTW CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE TQLPFSDMGEALERGDVDAIWVSEPHRTPGLNKGWKQIIAPGVQSFPDQIGGYYSTSQQF EECCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHH AESNPEVVRKFREAMTEVNGFAQDNPDRVGEVAVAEMGIDAAIIDQVNFPKFPTEDDGQA HCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHH LRNYGAAVVEYGIIDKEPEDYDALFAATD HHHHCHHHHHCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA