| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871433
Identifier: 119871433
GI number: 119871433
Start: 5642505
End: 5643182
Strand: Direct
Name: 119871433
Synonym: Mkms_5409
Alternate gene names: NA
Gene position: 5642505-5643182 (Clockwise)
Preceding gene: 119871431
Following gene: 119871434
Centisome position: 98.35
GC content: 64.9
Gene sequence:
>678_bases GTGCACAGCAACAAGGTTCTGGTAGCAGGAGCCGCGGTGGCGCTGGTGACGGCGATCGCATCGTGTGGCAACTCCGGAAA CGACGAGGCGGCGTCACCCGCGCCCGCACCCGTTCAGACGTCGAGCGCGGCTCCCGCGGCATCGCACAACCAGACCGACA TGATGTTCTCGCGCCACATGATCCCGCACCACCAGCAGGCGATCGAGATGAGCGACATGGTCGCGGCCAAGGAGGGCATC GACTCGCGGGTCATCGACATGGCCAGGCAGATCAAGGCCGCGCAGGACCCGGAGATCAAGCAGATGCAGGGCTGGCTCGA CCAGTGGGGCATGCCGGGGCCGAACGCTCCGGGCGGGGACATGGGACCACACCACGGTGGTACGTCGAGCGGTCCGATGA TGCCCGGTATGGGCGGCATGCCCGGTATGGGCGGGATGGCCGGTATGGACGGGATGATGTCGCCGGCCGATATGGACGCA CTCCGCAACGCCCAGGGCGTCGACGCGAGCCGGTTGTTCCTGACCCAGATGATCCGGCATCACGAGGGTGCGATCACCAT GGCGCAGAACGAGATCGACAACGGCCAGTTCCCAGACACCGTCGCGTTGGCCAAGTCGATCGTGACCAGTCAAAAGAAGG AGATCGACACCATGAAGCAGATTCTGGACTCGCTGTAG
Upstream 100 bases:
>100_bases GTTTCTATACCGAATCTTCACAGGACCACCAGGCCCGCTCCACATCACGCGGGAAGGCTTGGCCCGGTACCGAACGTCCG ACGGTCGAAAGGGAAGCGTT
Downstream 100 bases:
>100_bases CCCTCTGCCGGTGAGGCCAGATGAAACTCCGAACGGAAGCGCTGCTGTCCGCCCTACTGCTGGCAGTGGCGCTTGCGGGC TGCGCCGGCGGTGACCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MHSNKVLVAGAAVALVTAIASCGNSGNDEAASPAPAPVQTSSAAPAASHNQTDMMFSRHMIPHHQQAIEMSDMVAAKEGI DSRVIDMARQIKAAQDPEIKQMQGWLDQWGMPGPNAPGGDMGPHHGGTSSGPMMPGMGGMPGMGGMAGMDGMMSPADMDA LRNAQGVDASRLFLTQMIRHHEGAITMAQNEIDNGQFPDTVALAKSIVTSQKKEIDTMKQILDSL
Sequences:
>Translated_225_residues MHSNKVLVAGAAVALVTAIASCGNSGNDEAASPAPAPVQTSSAAPAASHNQTDMMFSRHMIPHHQQAIEMSDMVAAKEGI DSRVIDMARQIKAAQDPEIKQMQGWLDQWGMPGPNAPGGDMGPHHGGTSSGPMMPGMGGMPGMGGMAGMDGMMSPADMDA LRNAQGVDASRLFLTQMIRHHEGAITMAQNEIDNGQFPDTVALAKSIVTSQKKEIDTMKQILDSL >Mature_225_residues MHSNKVLVAGAAVALVTAIASCGNSGNDEAASPAPAPVQTSSAAPAASHNQTDMMFSRHMIPHHQQAIEMSDMVAAKEGI DSRVIDMARQIKAAQDPEIKQMQGWLDQWGMPGPNAPGGDMGPHHGGTSSGPMMPGMGGMPGMGGMAGMDGMMSPADMDA LRNAQGVDASRLFLTQMIRHHEGAITMAQNEIDNGQFPDTVALAKSIVTSQKKEIDTMKQILDSL
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23559; Mature: 23559
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 10.2 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 10.2 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSNKVLVAGAAVALVTAIASCGNSGNDEAASPAPAPVQTSSAAPAASHNQTDMMFSRHM CCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC IPHHQQAIEMSDMVAAKEGIDSRVIDMARQIKAAQDPEIKQMQGWLDQWGMPGPNAPGGD CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC MGPHHGGTSSGPMMPGMGGMPGMGGMAGMDGMMSPADMDALRNAQGVDASRLFLTQMIRH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH HEGAITMAQNEIDNGQFPDTVALAKSIVTSQKKEIDTMKQILDSL HCCCEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MHSNKVLVAGAAVALVTAIASCGNSGNDEAASPAPAPVQTSSAAPAASHNQTDMMFSRHM CCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC IPHHQQAIEMSDMVAAKEGIDSRVIDMARQIKAAQDPEIKQMQGWLDQWGMPGPNAPGGD CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC MGPHHGGTSSGPMMPGMGGMPGMGGMAGMDGMMSPADMDALRNAQGVDASRLFLTQMIRH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH HEGAITMAQNEIDNGQFPDTVALAKSIVTSQKKEIDTMKQILDSL HCCCEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA