| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is cpnA [H]
Identifier: 119871416
GI number: 119871416
Start: 5627055
End: 5627789
Strand: Direct
Name: cpnA [H]
Synonym: Mkms_5392
Alternate gene names: 119871416
Gene position: 5627055-5627789 (Clockwise)
Preceding gene: 119871415
Following gene: 119871417
Centisome position: 98.08
GC content: 71.56
Gene sequence:
>735_bases ATGGAACTCGACAAGCAGATCGCGCTGGTGACCGGCGGGACATCGGGAATCGGCCTGGCCTCGGCGCGGCTGCTGGCCGC CGAGGGTGCCGAGGTCGTCGTCTCCGGACGCGACGCCGAGCGTGGGGCACAGGCCGTGGCCGAGATCGGCGGCGCGGTGA GGTTCGTGCAGGCCGATATGAGCGACCCTCAGTCGGTGAAGGACCTGGCCGAACAGGCCGGAGACGTCGACATCCTGGTC AACAACGCGGGGGTGTTTCCCGCCGCGCCGACGCTGGACCAGGATCTCGCATCCTTCGAGACCATGTTCGACACGAACGT GCGCGGCGCCTACTTCCTGGTGGCCGAGGTCGCCAGGGGCATGGTCGCGCGCGGGCGGGGCGCGATCGTCAACATCACCT CCCCGGCGGGCGACAAGGGCTTTCCCGGCACGTCGGCCTACGGCGCCACGAAGGCCGCGCTGGCCTCGCTGACCCGTACC TGGGCCGCGGAGTTCGGCGCCAACGGCGTTCGCGTCAACAGTGTCTCGCCGGGTCCGACGCGCACACCGGGGACCGCCGA CATGGGCGACTTCATCGACGACGTCGCCGGGGCACTGCCGCTGGGCCGCACCGCGCGGCCCCGAGGAGGTCGCTCAGGCG GTGCTGTTCCTGACGTCGCCGCGGTCGAGTTTCGTGACGGGGTCGACGCTGTACGTCGACGGCGGCGGCTCGGCGGTGTG ACGCGCCGCCGGTAG
Upstream 100 bases:
>100_bases CGGTGCGCCTCAAGCCGCGGCTCTCCCCGCCGGCCGGCGGCGATCCCAGCGCCTGGGGATAGCGGGAACAATCCACACCC GGCGCACGCTTGTACGGCCC
Downstream 100 bases:
>100_bases GGTGGCGATGCGATGACGAATACCGATGTGACCGGCAAGGTTTCCGCGCTCCGCCGCTACCCGGTGAAGTCGATGCTCGG CGAGCAGTGCGACGCGCTCA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MELDKQIALVTGGTSGIGLASARLLAAEGAEVVVSGRDAERGAQAVAEIGGAVRFVQADMSDPQSVKDLAEQAGDVDILV NNAGVFPAAPTLDQDLASFETMFDTNVRGAYFLVAEVARGMVARGRGAIVNITSPAGDKGFPGTSAYGATKAALASLTRT WAAEFGANGVRVNSVSPGPTRTPGTADMGDFIDDVAGALPLGRTARPRGGRSGGAVPDVAAVEFRDGVDAVRRRRRLGGV TRRR
Sequences:
>Translated_244_residues MELDKQIALVTGGTSGIGLASARLLAAEGAEVVVSGRDAERGAQAVAEIGGAVRFVQADMSDPQSVKDLAEQAGDVDILV NNAGVFPAAPTLDQDLASFETMFDTNVRGAYFLVAEVARGMVARGRGAIVNITSPAGDKGFPGTSAYGATKAALASLTRT WAAEFGANGVRVNSVSPGPTRTPGTADMGDFIDDVAGALPLGRTARPRGGRSGGAVPDVAAVEFRDGVDAVRRRRRLGGV TRRR >Mature_244_residues MELDKQIALVTGGTSGIGLASARLLAAEGAEVVVSGRDAERGAQAVAEIGGAVRFVQADMSDPQSVKDLAEQAGDVDILV NNAGVFPAAPTLDQDLASFETMFDTNVRGAYFLVAEVARGMVARGRGAIVNITSPAGDKGFPGTSAYGATKAALASLTRT WAAEFGANGVRVNSVSPGPTRTPGTADMGDFIDDVAGALPLGRTARPRGGRSGGAVPDVAAVEFRDGVDAVRRRRRLGGV TRRR
Specific function: Reduces cyclopentanol to cyclopentanone. The enzyme also shows considerable activity toward cyclohexanol [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=201, Percent_Identity=35.8208955223881, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI32483357, Length=188, Percent_Identity=36.1702127659575, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI40254992, Length=205, Percent_Identity=31.7073170731707, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI33667109, Length=188, Percent_Identity=35.6382978723404, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI5031737, Length=188, Percent_Identity=35.6382978723404, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI15277342, Length=224, Percent_Identity=31.6964285714286, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI19923817, Length=188, Percent_Identity=30.3191489361702, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI226371731, Length=211, Percent_Identity=31.2796208530806, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI126723191, Length=187, Percent_Identity=34.7593582887701, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI10190704, Length=185, Percent_Identity=30.8108108108108, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI7657478, Length=182, Percent_Identity=35.1648351648352, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI59889578, Length=192, Percent_Identity=30.7291666666667, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI66933014, Length=186, Percent_Identity=29.5698924731183, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI4503301, Length=193, Percent_Identity=27.4611398963731, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI4503817, Length=191, Percent_Identity=31.9371727748691, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI31542939, Length=213, Percent_Identity=30.5164319248826, Blast_Score=77, Evalue=9e-15, Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=28.4974093264249, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI209862901, Length=195, Percent_Identity=35.3846153846154, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI19923983, Length=195, Percent_Identity=35.3846153846154, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4758504, Length=193, Percent_Identity=31.6062176165803, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI7705855, Length=189, Percent_Identity=32.8042328042328, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI126723750, Length=192, Percent_Identity=31.25, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=29.0155440414508, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI210032110, Length=198, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI186928839, Length=205, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI157739938, Length=192, Percent_Identity=28.6458333333333, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI109715829, Length=200, Percent_Identity=29.5, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI119392083, Length=197, Percent_Identity=29.9492385786802, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI225579078, Length=199, Percent_Identity=28.1407035175879, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4502599, Length=234, Percent_Identity=27.3504273504274, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI166795268, Length=205, Percent_Identity=28.2926829268293, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI223718074, Length=191, Percent_Identity=30.8900523560209, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87082100, Length=222, Percent_Identity=35.1351351351351, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1788459, Length=208, Percent_Identity=36.0576923076923, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1787335, Length=229, Percent_Identity=35.3711790393013, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1787820, Length=177, Percent_Identity=33.8983050847458, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI87082160, Length=188, Percent_Identity=35.1063829787234, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI2367175, Length=212, Percent_Identity=36.3207547169811, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI2367365, Length=205, Percent_Identity=32.1951219512195, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787905, Length=189, Percent_Identity=35.978835978836, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790717, Length=210, Percent_Identity=29.5238095238095, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789378, Length=214, Percent_Identity=33.1775700934579, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789208, Length=194, Percent_Identity=26.8041237113402, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786812, Length=223, Percent_Identity=31.8385650224215, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786701, Length=186, Percent_Identity=31.7204301075269, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789057, Length=185, Percent_Identity=34.0540540540541, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787526, Length=191, Percent_Identity=27.2251308900524, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17562910, Length=228, Percent_Identity=35.0877192982456, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17560220, Length=192, Percent_Identity=37.5, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI193204405, Length=227, Percent_Identity=35.2422907488987, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17562908, Length=230, Percent_Identity=34.7826086956522, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17560332, Length=195, Percent_Identity=37.9487179487179, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17562906, Length=232, Percent_Identity=34.051724137931, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17531453, Length=230, Percent_Identity=33.9130434782609, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17551412, Length=232, Percent_Identity=33.6206896551724, Blast_Score=97, Evalue=5e-21, Organism=Caenorhabditis elegans, GI71994604, Length=190, Percent_Identity=32.1052631578947, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17560150, Length=226, Percent_Identity=30.9734513274336, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17563726, Length=223, Percent_Identity=31.8385650224215, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17562990, Length=223, Percent_Identity=30.4932735426009, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17538480, Length=229, Percent_Identity=33.1877729257642, Blast_Score=93, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17561402, Length=198, Percent_Identity=32.8282828282828, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17538486, Length=217, Percent_Identity=32.7188940092166, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17562904, Length=231, Percent_Identity=30.7359307359307, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17565030, Length=236, Percent_Identity=31.3559322033898, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI25147288, Length=206, Percent_Identity=32.0388349514563, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71994600, Length=185, Percent_Identity=30.8108108108108, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17555706, Length=193, Percent_Identity=34.1968911917098, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI72000259, Length=183, Percent_Identity=34.9726775956284, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17560676, Length=220, Percent_Identity=32.7272727272727, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17544670, Length=228, Percent_Identity=27.6315789473684, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17559104, Length=189, Percent_Identity=34.3915343915344, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17536651, Length=220, Percent_Identity=32.7272727272727, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17536025, Length=223, Percent_Identity=31.8385650224215, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17555612, Length=209, Percent_Identity=35.4066985645933, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17538182, Length=196, Percent_Identity=32.1428571428571, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71997099, Length=205, Percent_Identity=33.1707317073171, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI115534694, Length=192, Percent_Identity=34.8958333333333, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17508895, Length=191, Percent_Identity=29.8429319371728, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17561272, Length=206, Percent_Identity=28.1553398058252, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI212646214, Length=204, Percent_Identity=28.4313725490196, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71982365, Length=186, Percent_Identity=27.9569892473118, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17564282, Length=179, Percent_Identity=30.7262569832402, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17568967, Length=191, Percent_Identity=28.2722513089005, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322067, Length=182, Percent_Identity=32.4175824175824, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322227, Length=196, Percent_Identity=30.6122448979592, Blast_Score=72, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6323882, Length=194, Percent_Identity=30.4123711340206, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322861, Length=191, Percent_Identity=28.2722513089005, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI23397609, Length=227, Percent_Identity=35.2422907488987, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI28571526, Length=181, Percent_Identity=36.4640883977901, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI21357041, Length=181, Percent_Identity=36.4640883977901, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24644339, Length=190, Percent_Identity=34.2105263157895, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI24643142, Length=188, Percent_Identity=37.2340425531915, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24639444, Length=212, Percent_Identity=33.0188679245283, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI21355319, Length=185, Percent_Identity=35.1351351351351, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24644337, Length=224, Percent_Identity=29.9107142857143, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI17737361, Length=203, Percent_Identity=31.0344827586207, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI116007236, Length=190, Percent_Identity=33.6842105263158, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI161076933, Length=265, Percent_Identity=27.1698113207547, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24584748, Length=198, Percent_Identity=30.3030303030303, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI281364892, Length=189, Percent_Identity=29.6296296296296, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640442, Length=183, Percent_Identity=29.5081967213115, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24584744, Length=268, Percent_Identity=26.1194029850746, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574402, Length=268, Percent_Identity=26.1194029850746, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116007238, Length=175, Percent_Identity=33.1428571428571, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI21357673, Length=186, Percent_Identity=30.6451612903226, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24640492, Length=184, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28571387, Length=227, Percent_Identity=27.7533039647577, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641232, Length=202, Percent_Identity=29.2079207920792, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24663911, Length=192, Percent_Identity=30.2083333333333, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21355631, Length=171, Percent_Identity=30.4093567251462, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21358495, Length=200, Percent_Identity=29, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641388, Length=196, Percent_Identity=31.1224489795918, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.163 [H]
Molecular weight: Translated: 25011; Mature: 25011
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDKQIALVTGGTSGIGLASARLLAAEGAEVVVSGRDAERGAQAVAEIGGAVRFVQADM CCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHEEEEECCC SDPQSVKDLAEQAGDVDILVNNAGVFPAAPTLDQDLASFETMFDTNVRGAYFLVAEVARG CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH MVARGRGAIVNITSPAGDKGFPGTSAYGATKAALASLTRTWAAEFGANGVRVNSVSPGPT HHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC RTPGTADMGDFIDDVAGALPLGRTARPRGGRSGGAVPDVAAVEFRDGVDAVRRRRRLGGV CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCC TRRR CCCC >Mature Secondary Structure MELDKQIALVTGGTSGIGLASARLLAAEGAEVVVSGRDAERGAQAVAEIGGAVRFVQADM CCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHEEEEECCC SDPQSVKDLAEQAGDVDILVNNAGVFPAAPTLDQDLASFETMFDTNVRGAYFLVAEVARG CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH MVARGRGAIVNITSPAGDKGFPGTSAYGATKAALASLTRTWAAEFGANGVRVNSVSPGPT HHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC RTPGTADMGDFIDDVAGALPLGRTARPRGGRSGGAVPDVAAVEFRDGVDAVRRRRRLGGV CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCC TRRR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12406764 [H]