| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119871404
Identifier: 119871404
GI number: 119871404
Start: 5615265
End: 5615753
Strand: Direct
Name: 119871404
Synonym: Mkms_5380
Alternate gene names: NA
Gene position: 5615265-5615753 (Clockwise)
Preceding gene: 119871403
Following gene: 119871405
Centisome position: 97.87
GC content: 66.46
Gene sequence:
>489_bases ATGAGCACCGACCACGCGATCGCCGCCCCGGTCCTTACGTCGCCGGCGTTCGACCCACCACGCCGCGACCTGACCACGCG TGCGGATGTCGAGTCGCTACTGCGTCGCTTCTACAGCGAGGCGTTCGAGGACGAACTCCTCGCCCTGCCGTTCGCTGAAC TCTCGTCGCACGGCCTGGAAGAACACTTGCCGGTCATGTGTGATTTCTGGGAGACGGTGTTGTTCCGGGCGGGCCTCTAT CGGCGCAACGCGCTGCACGTGCACAGGCGCATCCACCACCAGACACCGCTGGATGCAACGCATTTCGTGCGCTGGCTGTC GCTGTGGAGCGCCACGATCGACGACATGTACCGAGGCCCCGTCGCCGAACACGCCAAGATCCAAGCCACGCGGATCGCGA CCGCCATGCACCGTCGCCTCGCCGGCGCCCACGGCGGCACGACGATCGCGGGCGCCAATCCGCTGAAGGAGAACCCATGC GTGTCGTAG
Upstream 100 bases:
>100_bases CTCTCAGCCGGTGGAAGGCCCCGATCACCGTGGAGGCACTGATCCCGTTCGCCGAGCCGGACCTGTGCGTCGCGCACCTG GCACCGGCGGGGCGGACCTC
Downstream 100 bases:
>100_bases TGGACTCTGACCGCTGTGAAGGCAATGCACTGTGCGTGAGGATCGCACCGGCGGTCTTCCAACTCGACGACGACGAATAC GCCACTGTCGTCGCCGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSTDHAIAAPVLTSPAFDPPRRDLTTRADVESLLRRFYSEAFEDELLALPFAELSSHGLEEHLPVMCDFWETVLFRAGLY RRNALHVHRRIHHQTPLDATHFVRWLSLWSATIDDMYRGPVAEHAKIQATRIATAMHRRLAGAHGGTTIAGANPLKENPC VS
Sequences:
>Translated_162_residues MSTDHAIAAPVLTSPAFDPPRRDLTTRADVESLLRRFYSEAFEDELLALPFAELSSHGLEEHLPVMCDFWETVLFRAGLY RRNALHVHRRIHHQTPLDATHFVRWLSLWSATIDDMYRGPVAEHAKIQATRIATAMHRRLAGAHGGTTIAGANPLKENPC VS >Mature_161_residues STDHAIAAPVLTSPAFDPPRRDLTTRADVESLLRRFYSEAFEDELLALPFAELSSHGLEEHLPVMCDFWETVLFRAGLYR RNALHVHRRIHHQTPLDATHFVRWLSLWSATIDDMYRGPVAEHAKIQATRIATAMHRRLAGAHGGTTIAGANPLKENPCV S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18230; Mature: 18099
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDHAIAAPVLTSPAFDPPRRDLTTRADVESLLRRFYSEAFEDELLALPFAELSSHGLE CCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH EHLPVMCDFWETVLFRAGLYRRNALHVHRRIHHQTPLDATHFVRWLSLWSATIDDMYRGP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC VAEHAKIQATRIATAMHRRLAGAHGGTTIAGANPLKENPCVS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STDHAIAAPVLTSPAFDPPRRDLTTRADVESLLRRFYSEAFEDELLALPFAELSSHGLE CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH EHLPVMCDFWETVLFRAGLYRRNALHVHRRIHHQTPLDATHFVRWLSLWSATIDDMYRGP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC VAEHAKIQATRIATAMHRRLAGAHGGTTIAGANPLKENPCVS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA