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The map label for this gene is scnC [H]

Identifier: 119871371

GI number: 119871371

Start: 5582123

End: 5582785

Strand: Direct

Name: scnC [H]

Synonym: Mkms_5347

Alternate gene names: 119871371

Gene position: 5582123-5582785 (Clockwise)

Preceding gene: 119871370

Following gene: 119871372

Centisome position: 97.3

GC content: 66.37

Gene sequence:

>663_bases
ATGGTCGACGAGATCACCGACTTCGAGGTCCTCGAGATCGCGTTGCGCGAATTGTGCATCGAGAAGGGCATCTTCACCGC
CGAGGAGCACCGCCACTTCACCGAGTTCGCCGAGCAGATCGGACCCACCCCCGCCGCGCGTCTGGTGGCGCGGGCATGGC
TCGACCCCGACTTCAAGGACCTCGCACTGCGCGAACCGATGACCGCGAGCAAGGAGGTCGGCGTCGACTGGATGGAGCCG
ACCGGGTTCGGCACGCCCAGTGACTTCACCGCCTTCGAAATCCTCGCCGACACACCGGGTCTGCACCACGTGATCGTCTG
CGCCCTGTGCTCCTGCTACCCCCGGCCCATCCTCGGCAACTCACCGGAGTGGTACCGCACGCCCAACTACCGTCGGCGCC
TGGTCCGCTGGCCGCGTCAGGTGCTCGCCGAATTCGGGCTCTACCTGCCCGACGACGTCGAGGTCCGGGTGCAGGACTCC
AACCAGAAACACCGCTTCATGGTGATGCCGATGCGCCCAGAGGGCACCGACGGCTGGACCGAAGACCAACTGGCCGAGAT
CGTCACGCGTGACTGCCTCATCGGGGTCGCGCTTCCGAAACCGGGTGTCACCACCAACGTCATCGTCGACACCCGGCCGG
CCGTCCACCCGATCACCGACTGA

Upstream 100 bases:

>100_bases
CGAACTGCCCGAACGCTGGCTCGAAGCGGCAAGCTGAACACCGGAGGACACCACCGTGACCCACGACCACGACCACGACC
ACGACCGGACCGTCAAACCG

Downstream 100 bases:

>100_bases
GCGCATGACTGCCCCCGAACCGATCGAGACCCTCGCCCGCATCGTCGAACGCGGTCAGGTGTGGCCGCGGATGGCCGCCA
AATACGGCGTCGAGAACCCG

Product: thiocyanate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MVDEITDFEVLEIALRELCIEKGIFTAEEHRHFTEFAEQIGPTPAARLVARAWLDPDFKDLALREPMTASKEVGVDWMEP
TGFGTPSDFTAFEILADTPGLHHVIVCALCSCYPRPILGNSPEWYRTPNYRRRLVRWPRQVLAEFGLYLPDDVEVRVQDS
NQKHRFMVMPMRPEGTDGWTEDQLAEIVTRDCLIGVALPKPGVTTNVIVDTRPAVHPITD

Sequences:

>Translated_220_residues
MVDEITDFEVLEIALRELCIEKGIFTAEEHRHFTEFAEQIGPTPAARLVARAWLDPDFKDLALREPMTASKEVGVDWMEP
TGFGTPSDFTAFEILADTPGLHHVIVCALCSCYPRPILGNSPEWYRTPNYRRRLVRWPRQVLAEFGLYLPDDVEVRVQDS
NQKHRFMVMPMRPEGTDGWTEDQLAEIVTRDCLIGVALPKPGVTTNVIVDTRPAVHPITD
>Mature_220_residues
MVDEITDFEVLEIALRELCIEKGIFTAEEHRHFTEFAEQIGPTPAARLVARAWLDPDFKDLALREPMTASKEVGVDWMEP
TGFGTPSDFTAFEILADTPGLHHVIVCALCSCYPRPILGNSPEWYRTPNYRRRLVRWPRQVLAEFGLYLPDDVEVRVQDS
NQKHRFMVMPMRPEGTDGWTEDQLAEIVTRDCLIGVALPKPGVTTNVIVDTRPAVHPITD

Specific function: Involved in the degradation of thiocyanate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitrile hydratase subunit alpha family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004232
- ProDom:   PD007559 [H]

Pfam domain/function: PF02979 NHase_alpha [H]

EC number: =3.5.5.8 [H]

Molecular weight: Translated: 24987; Mature: 24987

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDEITDFEVLEIALRELCIEKGIFTAEEHRHFTEFAEQIGPTPAARLVARAWLDPDFKD
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH
LALREPMTASKEVGVDWMEPTGFGTPSDFTAFEILADTPGLHHVIVCALCSCYPRPILGN
HHHCCCCCCHHHCCCCEECCCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHCCCCCCCCC
SPEWYRTPNYRRRLVRWPRQVLAEFGLYLPDDVEVRVQDSNQKHRFMVMPMRPEGTDGWT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCC
EDQLAEIVTRDCLIGVALPKPGVTTNVIVDTRPAVHPITD
HHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MVDEITDFEVLEIALRELCIEKGIFTAEEHRHFTEFAEQIGPTPAARLVARAWLDPDFKD
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH
LALREPMTASKEVGVDWMEPTGFGTPSDFTAFEILADTPGLHHVIVCALCSCYPRPILGN
HHHCCCCCCHHHCCCCEECCCCCCCCCCCHHEEEECCCCCHHHHHHHHHHHCCCCCCCCC
SPEWYRTPNYRRRLVRWPRQVLAEFGLYLPDDVEVRVQDSNQKHRFMVMPMRPEGTDGWT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCC
EDQLAEIVTRDCLIGVALPKPGVTTNVIVDTRPAVHPITD
HHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9573140; 1577754 [H]