| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is dhmA2 [H]
Identifier: 119871285
GI number: 119871285
Start: 5494823
End: 5495668
Strand: Direct
Name: dhmA2 [H]
Synonym: Mkms_5258
Alternate gene names: 119871285
Gene position: 5494823-5495668 (Clockwise)
Preceding gene: 119871282
Following gene: 119871286
Centisome position: 95.77
GC content: 66.78
Gene sequence:
>846_bases ATGCCCACTCTCACGTTGCCGACCGCAACCATCAACTACCGCGTCGCCGGTCCGGAGAACTCGCAGTTCCCGCCGGTGGT GTTCGTCCACGGTGCGCTCGTCGACCACCGGCTGTGGGATCCCGTGGCAGATATTCTGTCGGCCAAAGGTTTTCGCTGCG TGCTACCCGACTGGCCGTTGGGGTCGCACCGCATCCCGGTCGACTCCGAACTGTCGCCGACAAGTGTGGCCGCAATGGTC CATGACCTCCTCACGACGCTCGGGCTGGATGACGTCACGCTGGTCGGCAACGACACCGGCGGCGCAATCTGCCAATTGGT GGTCGACGCATACCCGGACCTGATCGGCCGCCTGGTCCTCACGAATTGCGATGCCTTCGACAAGTTCCCACCCTTCCCGT TCAACGTGGTCTTCGCGATGTTGCGCGGCCAGGTGTCGATCAAGGTGCTGACCGAGCTGATGCGGGTCCGCGTGTTGCGC CAGTCGCCTCTCGGGTTCGGGTTGCTGAGCCGGCCGCATCCCGAGCTCACCGCGTCGTGGCTGGAGCCCTGCAGGACGGA CGCCGGTGTGCGCGCGAATCTGGCGACGCTGCTGAGGCACATCGCCGCAACGGATCTCACCGTCGTCGCGGACCGGCTAC CGCAATTCACCAAGCCGGTGCGGCTGGTGTGGGGTATGCGGGACCGCTGCTTCACTCCGGCGCTGGGCCGTCGGCTGACA GGTCAGTTCCCCGACGCGACGATGGTCGAGGTGCCGGACGCGAGCACGTTCGTCGCCCTGGACGCGCCGCACGCGGTCGC CGATGCGGTGGAAGCGCTGTCACGGAGTGCGACCGGCGCTCAGTAG
Upstream 100 bases:
>100_bases AACTGGCTTGGCCGCAGCAGACGCGTCGTTGACTTTCATACAGTCTGCACGTAACTTTCATACTAGGTGTTTGTAAGTTC CAGATCGAAGGGTAGCCGAC
Downstream 100 bases:
>100_bases CGGCCGCAACCGCACACCCGGTCTACCCGAGTGGCGTCACGCGAACCCCCGTCAACTGGGAGCGCGATATCATTTGCGCG TGCAAGGGCAGCATCGATGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MPTLTLPTATINYRVAGPENSQFPPVVFVHGALVDHRLWDPVADILSAKGFRCVLPDWPLGSHRIPVDSELSPTSVAAMV HDLLTTLGLDDVTLVGNDTGGAICQLVVDAYPDLIGRLVLTNCDAFDKFPPFPFNVVFAMLRGQVSIKVLTELMRVRVLR QSPLGFGLLSRPHPELTASWLEPCRTDAGVRANLATLLRHIAATDLTVVADRLPQFTKPVRLVWGMRDRCFTPALGRRLT GQFPDATMVEVPDASTFVALDAPHAVADAVEALSRSATGAQ
Sequences:
>Translated_281_residues MPTLTLPTATINYRVAGPENSQFPPVVFVHGALVDHRLWDPVADILSAKGFRCVLPDWPLGSHRIPVDSELSPTSVAAMV HDLLTTLGLDDVTLVGNDTGGAICQLVVDAYPDLIGRLVLTNCDAFDKFPPFPFNVVFAMLRGQVSIKVLTELMRVRVLR QSPLGFGLLSRPHPELTASWLEPCRTDAGVRANLATLLRHIAATDLTVVADRLPQFTKPVRLVWGMRDRCFTPALGRRLT GQFPDATMVEVPDASTFVALDAPHAVADAVEALSRSATGAQ >Mature_280_residues PTLTLPTATINYRVAGPENSQFPPVVFVHGALVDHRLWDPVADILSAKGFRCVLPDWPLGSHRIPVDSELSPTSVAAMVH DLLTTLGLDDVTLVGNDTGGAICQLVVDAYPDLIGRLVLTNCDAFDKFPPFPFNVVFAMLRGQVSIKVLTELMRVRVLRQ SPLGFGLLSRPHPELTASWLEPCRTDAGVRANLATLLRHIAATDLTVVADRLPQFTKPVRLVWGMRDRCFTPALGRRLTG QFPDATMVEVPDASTFVALDAPHAVADAVEALSRSATGAQ
Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the haloalkane dehalogenase family. Type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.5 [H]
Molecular weight: Translated: 30462; Mature: 30330
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLTLPTATINYRVAGPENSQFPPVVFVHGALVDHRLWDPVADILSAKGFRCVLPDWPL CCCEECCCEEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCEEECCCCCC GSHRIPVDSELSPTSVAAMVHDLLTTLGLDDVTLVGNDTGGAICQLVVDAYPDLIGRLVL CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH TNCDAFDKFPPFPFNVVFAMLRGQVSIKVLTELMRVRVLRQSPLGFGLLSRPHPELTASW HCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LEPCRTDAGVRANLATLLRHIAATDLTVVADRLPQFTKPVRLVWGMRDRCFTPALGRRLT HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHC GQFPDATMVEVPDASTFVALDAPHAVADAVEALSRSATGAQ CCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PTLTLPTATINYRVAGPENSQFPPVVFVHGALVDHRLWDPVADILSAKGFRCVLPDWPL CCEECCCEEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCEEECCCCCC GSHRIPVDSELSPTSVAAMVHDLLTTLGLDDVTLVGNDTGGAICQLVVDAYPDLIGRLVL CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH TNCDAFDKFPPFPFNVVFAMLRGQVSIKVLTELMRVRVLRQSPLGFGLLSRPHPELTASW HCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LEPCRTDAGVRANLATLLRHIAATDLTVVADRLPQFTKPVRLVWGMRDRCFTPALGRRLT HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHC GQFPDATMVEVPDASTFVALDAPHAVADAVEALSRSATGAQ CCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]