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The map label for this gene is crtB [H]

Identifier: 119871191

GI number: 119871191

Start: 5413154

End: 5414104

Strand: Direct

Name: crtB [H]

Synonym: Mkms_5164

Alternate gene names: 119871191

Gene position: 5413154-5414104 (Clockwise)

Preceding gene: 119871190

Following gene: 119871192

Centisome position: 94.35

GC content: 71.29

Gene sequence:

>951_bases
ATGATCGGATCCGAACTCGACGCCGCCGGGGTCCGCGACCCCGCGCTGCGCAACGCCTACCGCTGCTGCCGTGTGCTCAA
CGCCGAACACGGCCGGACCTTCTACCTGGCGACCCGGCTGCTGGCGCCCGAACAGCGGCCCGCGGTGCACGCCCTGTACG
GGTTCGCCCGCCGCGCCGACGACATCCTCGACGATCTGGACTCCGCGGCAACCACCGCCGAACGTGCCGACCGCCTGCAC
CGGCTGGCCACCCAGCTGTTCGACGGTCTCGTGCAGGGCAACGCCACCGGCGGCGATCCGGCGCTGGCCGCGGTGGTGCA
CACCGCCCGCCGCTACGGGATCCCGTGGGAGTTGTTCGACGACTTCCTCGCGTCGATGCGGATGGACCTCACCGTGACCG
ACTATCCGGACCGGGCGTCGATCGACCGCTACATGTACGGCTCCGCGGAGGTCATCGGGCTGCAGCTGCTGCCGGTCCTG
GGCACGGTCGTCCCGCGCGAGGAGGCCGCTCCGTACGCGGCGGCTCTCGGTAAAGCCTTCCAGCTGACCAACTTCCTGCG
CGACGTCGACGAGGACCTCGACCGCGGGCGGGTGTACCTGCCCGCCGACGAACTGGCCGCGCACGGCGTCGACCGCGATC
TGCTGATGTGGTGTCACACCACCAAGCGCACCGACACCCGGGTCCGCAACGCGCTGGCCGAACAGCACGCGGTGACCCGG
CGCGTGTACGACTACGCCCGGCACGGGGTCGATCTGCTGCATCCGCGCTCGCGGGCCTGTGTCGGCGCCGCGGCCGTGCT
CTATTCGGAGATACTGGACCGCATCGAGGCCATCGATTTCGACATCTTCAACCAGCGCGCCACCGTGGGGAACGGACGCC
GGCTCCGGGTGGCGGGTGCCGGGCTGCTGCGGGCCTGGCGCGCCCGCATCGCCCACCCCGCGAAGGTCTGA

Upstream 100 bases:

>100_bases
CCGCGTTGCTGTCCGGCCGGTTGGCCGCAGATCGAATCACCGGGACCGTCGCGTCGTCCAACCCGACGGCGGCCCCGACC
AGAACGAGGAGCGGGCTGTC

Downstream 100 bases:

>100_bases
GGGCATGGATCGATTCCACTACCTGCTGGTCCTGGGCGCCTGTCTGCTGGTCACCCTGCCGCTGGAGGTCTTCGGCGCCG
GGGTGTACCGCCAGGCCAGG

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIGSELDAAGVRDPALRNAYRCCRVLNAEHGRTFYLATRLLAPEQRPAVHALYGFARRADDILDDLDSAATTAERADRLH
RLATQLFDGLVQGNATGGDPALAAVVHTARRYGIPWELFDDFLASMRMDLTVTDYPDRASIDRYMYGSAEVIGLQLLPVL
GTVVPREEAAPYAAALGKAFQLTNFLRDVDEDLDRGRVYLPADELAAHGVDRDLLMWCHTTKRTDTRVRNALAEQHAVTR
RVYDYARHGVDLLHPRSRACVGAAAVLYSEILDRIEAIDFDIFNQRATVGNGRRLRVAGAGLLRAWRARIAHPAKV

Sequences:

>Translated_316_residues
MIGSELDAAGVRDPALRNAYRCCRVLNAEHGRTFYLATRLLAPEQRPAVHALYGFARRADDILDDLDSAATTAERADRLH
RLATQLFDGLVQGNATGGDPALAAVVHTARRYGIPWELFDDFLASMRMDLTVTDYPDRASIDRYMYGSAEVIGLQLLPVL
GTVVPREEAAPYAAALGKAFQLTNFLRDVDEDLDRGRVYLPADELAAHGVDRDLLMWCHTTKRTDTRVRNALAEQHAVTR
RVYDYARHGVDLLHPRSRACVGAAAVLYSEILDRIEAIDFDIFNQRATVGNGRRLRVAGAGLLRAWRARIAHPAKV
>Mature_316_residues
MIGSELDAAGVRDPALRNAYRCCRVLNAEHGRTFYLATRLLAPEQRPAVHALYGFARRADDILDDLDSAATTAERADRLH
RLATQLFDGLVQGNATGGDPALAAVVHTARRYGIPWELFDDFLASMRMDLTVTDYPDRASIDRYMYGSAEVIGLQLLPVL
GTVVPREEAAPYAAALGKAFQLTNFLRDVDEDLDRGRVYLPADELAAHGVDRDLLMWCHTTKRTDTRVRNALAEQHAVTR
RVYDYARHGVDLLHPRSRACVGAAAVLYSEILDRIEAIDFDIFNQRATVGNGRRLRVAGAGLLRAWRARIAHPAKV

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 35104; Mature: 35104

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGSELDAAGVRDPALRNAYRCCRVLNAEHGRTFYLATRLLAPEQRPAVHALYGFARRAD
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHH
DILDDLDSAATTAERADRLHRLATQLFDGLVQGNATGGDPALAAVVHTARRYGIPWELFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
DFLASMRMDLTVTDYPDRASIDRYMYGSAEVIGLQLLPVLGTVVPREEAAPYAAALGKAF
HHHHHHHCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH
QLTNFLRDVDEDLDRGRVYLPADELAAHGVDRDLLMWCHTTKRTDTRVRNALAEQHAVTR
HHHHHHHHHHHHHHCCEEEECHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RVYDYARHGVDLLHPRSRACVGAAAVLYSEILDRIEAIDFDIFNQRATVGNGRRLRVAGA
HHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEEEEECH
GLLRAWRARIAHPAKV
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIGSELDAAGVRDPALRNAYRCCRVLNAEHGRTFYLATRLLAPEQRPAVHALYGFARRAD
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHH
DILDDLDSAATTAERADRLHRLATQLFDGLVQGNATGGDPALAAVVHTARRYGIPWELFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
DFLASMRMDLTVTDYPDRASIDRYMYGSAEVIGLQLLPVLGTVVPREEAAPYAAALGKAF
HHHHHHHCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHH
QLTNFLRDVDEDLDRGRVYLPADELAAHGVDRDLLMWCHTTKRTDTRVRNALAEQHAVTR
HHHHHHHHHHHHHHCCEEEECHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RVYDYARHGVDLLHPRSRACVGAAAVLYSEILDRIEAIDFDIFNQRATVGNGRRLRVAGA
HHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEEEEECH
GLLRAWRARIAHPAKV
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8917308 [H]